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Volumn 28, Issue 10, 2012, Pages 3039-3052

Characterization of microbial diversity and community in water flooding oil reservoirs in China

Author keywords

16S rDNA clone library; Archaeal community; Bacterial community; Correlation analysis; Water flooding oil reservoir

Indexed keywords

16S RDNA CLONE LIBRARY; ARCHAEAL; BACTERIAL COMMUNITY; CORRELATION ANALYSIS; OIL RESERVOIRS;

EID: 84865791972     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-012-1114-2     Document Type: Article
Times cited : (48)

References (53)
  • 1
    • 34347350504 scopus 로고
    • Microorganisms in oil fields
    • Bastin E (1926) Microorganisms in oil fields. Science 63: 21-24.
    • (1926) Science , vol.63 , pp. 21-24
    • Bastin, E.1
  • 2
    • 0030871461 scopus 로고    scopus 로고
    • Energetics of syntrophic cooperation in methanogenic degradation
    • Bernhard S (1997) Energetics of syntrophic cooperation in methanogenic degradation. Microbiol Mol Biol R 61: 262-280.
    • (1997) Microbiol Mol Biol R , vol.61 , pp. 262-280
    • Bernhard, S.1
  • 3
    • 9444257468 scopus 로고    scopus 로고
    • The microbial diversity of deep subsurface oil reservoirs
    • R. Vazquez-Duhalt and R. Quintero-Ra-mirez (Eds.), Amsterdam: Elsevier B.V
    • Birkeland NK (2004) The microbial diversity of deep subsurface oil reservoirs. In: Vazquez-Duhalt R, Quintero-Ra-mirez R (eds) Petroleum biotechnology: developments and perspectives. Elsevier B. V, Amsterdam, pp 385-403.
    • (2004) Petroleum Biotechnology: Developments and Perspectives , pp. 385-403
    • Birkeland, N.K.1
  • 4
    • 0036802894 scopus 로고    scopus 로고
    • Anaerobic oxidation of aromatic compounds and hydrocarbons
    • Boll MG, Fuchs G, Heider J (2002) Anaerobic oxidation of aromatic compounds and hydrocarbons. Curr Opin Chem Biol 6: 604-611.
    • (2002) Curr Opin Chem Biol , vol.6 , pp. 604-611
    • Boll, M.G.1    Fuchs, G.2    Heider, J.3
  • 6
  • 7
    • 0035063184 scopus 로고    scopus 로고
    • A molecular phylogenetic survey of sea-ice microbial communities (SIMCO)
    • Brown MV, Bowman JP (2001) A molecular phylogenetic survey of sea-ice microbial communities (SIMCO). FEMS Mcirobiol Ecol 35: 267-275.
    • (2001) FEMS Mcirobiol Ecol , vol.35 , pp. 267-275
    • Brown, M.V.1    Bowman, J.P.2
  • 8
    • 37449002019 scopus 로고    scopus 로고
    • Microbial community structure analysis of produced water from a high-temperature North Sea oil-field
    • Dahle H, Garshol F, Madsen M, Birkeland NK (2008) Microbial community structure analysis of produced water from a high-temperature North Sea oil-field. Antonie van Leeuwenhoek 93: 37-49.
    • (2008) Antonie Van Leeuwenhoek , vol.93 , pp. 37-49
    • Dahle, H.1    Garshol, F.2    Madsen, M.3    Birkeland, N.K.4
  • 9
    • 51149114568 scopus 로고    scopus 로고
    • Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea
    • Dang HY, Zhang XX, Sun J, Li TG, Zhang ZN, Yang GP (2008) Diversity and spatial distribution of sediment ammonia-oxidizing crenarchaeota in response to estuarine and environmental gradients in the Changjiang Estuary and East China Sea. Microbiology 154: 2084-2095.
    • (2008) Microbiology , vol.154 , pp. 2084-2095
    • Dang, H.Y.1    Zhang, X.X.2    Sun, J.3    Li, T.G.4    Zhang, Z.N.5    Yang, G.P.6
  • 10
    • 44249111438 scopus 로고    scopus 로고
    • Bioenergy production via microbial conversion of residual oil to natural gas
    • Gieg LM, Duncan KE, Suflita JM (2008) Bioenergy production via microbial conversion of residual oil to natural gas. Appl Environ Microbiol 74: 3022-3029.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 3022-3029
    • Gieg, L.M.1    Duncan, K.E.2    Suflita, J.M.3
  • 11
    • 26244434726 scopus 로고    scopus 로고
    • Microbial diversity in production waters of a low-temperature biodegraded oil reservoir
    • Grabowsk A, Nercessian O, Fayolle F, Blanchet D, Jeanthon C (2005) Microbial diversity in production waters of a low-temperature biodegraded oil reservoir. FEMS Mcirobiol Ecol 54: 427-443.
    • (2005) FEMS Mcirobiol Ecol , vol.54 , pp. 427-443
    • Grabowsk, A.1    Nercessian, O.2    Fayolle, F.3    Blanchet, D.4    Jeanthon, C.5
  • 12
    • 37049233709 scopus 로고
    • Biological formation of molecular hydrogen
    • Gray CT, Gest H (1965) Biological formation of molecular hydrogen. Science 148: 186-192.
    • (1965) Science , vol.148 , pp. 186-192
    • Gray, C.T.1    Gest, H.2
  • 13
    • 0029660135 scopus 로고    scopus 로고
    • Phylogenetic analysis of the bacterial communities in marine sediments
    • Gray JP, Herwig RP (1996) Phylogenetic analysis of the bacterial communities in marine sediments. Appl Environ Microbiol 62: 4049-4059.
    • (1996) Appl Environ Microbiol , vol.62 , pp. 4049-4059
    • Gray, J.P.1    Herwig, R.P.2
  • 14
    • 60249093389 scopus 로고    scopus 로고
    • Community dynamics of anaerobic bacteria in deep petroleum reservoirs
    • Hallmann C, Schwark L, Grice K (2008) Community dynamics of anaerobic bacteria in deep petroleum reservoirs. Nat Geosci 1: 588-591.
    • (2008) Nat Geosci , vol.1 , pp. 588-591
    • Hallmann, C.1    Schwark, L.2    Grice, K.3
  • 16
    • 0000860563 scopus 로고    scopus 로고
    • Ion Chromatography in Environmental Analysis
    • R. A. Meyers (Ed.), Chichester: Wiley
    • Jackson PE (2000) Ion Chromatography in Environmental Analysis. In: Meyers RA (ed) Encyclopedia of analytical chemistry. Wiley, Chichester, pp 2779-2801.
    • (2000) Encyclopedia of Analytical Chemistry , pp. 2779-2801
    • Jackson, P.E.1
  • 17
    • 47849101839 scopus 로고    scopus 로고
    • TLC-FID (Latroscan) analysis of heavy oil and tar sand samples
    • Jiang CQ, Larter SR, Noke KJ, Snowdon LR (2008) TLC-FID (Latroscan) analysis of heavy oil and tar sand samples. Org Geochem 39: 1210-1214.
    • (2008) Org Geochem , vol.39 , pp. 1210-1214
    • Jiang, C.Q.1    Larter, S.R.2    Noke, K.J.3    Snowdon, L.R.4
  • 19
    • 8144227934 scopus 로고    scopus 로고
    • Synchronous effects of temperature, hydrostatic pressure, and salinity on growth, phospholipid profiles, and protein patterns of four Halomonas species isolated from deep-sea hydrothermal-vent and sea surface environments
    • Kaye JZ, Baross JA (2004) Synchronous effects of temperature, hydrostatic pressure, and salinity on growth, phospholipid profiles, and protein patterns of four Halomonas species isolated from deep-sea hydrothermal-vent and sea surface environments. Appl Environ Microbiol 70: 6220-6229.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6220-6229
    • Kaye, J.Z.1    Baross, J.A.2
  • 20
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 22
    • 35148875778 scopus 로고    scopus 로고
    • Phylogenetic diversity of the archaeal community in a continental high-temperature, water-flooded petroleum reservoir
    • Li H, Yang SZ, Mu BZ (2007a) Phylogenetic diversity of the archaeal community in a continental high-temperature, water-flooded petroleum reservoir. Curr Microbiol 55: 382-388.
    • (2007) Curr Microbiol , vol.55 , pp. 382-388
    • Li, H.1    Yang, S.Z.2    Mu, B.Z.3
  • 23
    • 33947239403 scopus 로고    scopus 로고
    • Molecular phylogenetic diversity of the microbial community associated with a high-temperature petroleum reservoir at an offshore oilfield
    • Li H, Yang SZ, Mu BZ, Rong ZF, Zhang J (2007b) Molecular phylogenetic diversity of the microbial community associated with a high-temperature petroleum reservoir at an offshore oilfield. FEMS Mcirobiol Ecol 60: 74-84.
    • (2007) FEMS Mcirobiol Ecol , vol.60 , pp. 74-84
    • Li, H.1    Yang, S.Z.2    Mu, B.Z.3    Rong, Z.F.4    Zhang, J.5
  • 24
    • 78149471109 scopus 로고    scopus 로고
    • Molecular detection of anaerobic ammonium-oxidizing (anammox) bacteria in high temperature petroleum reservoirs
    • Li H, Chen S, Mu BZ, Gu JD (2010) Molecular detection of anaerobic ammonium-oxidizing (anammox) bacteria in high temperature petroleum reservoirs. Microb Ecol 60: 771-783.
    • (2010) Microb Ecol , vol.60 , pp. 771-783
    • Li, H.1    Chen, S.2    Mu, B.Z.3    Gu, J.D.4
  • 25
    • 0030757801 scopus 로고    scopus 로고
    • Dethiosulfovibrio peptidovorans gen. nov., sp. nov., a new anaerobic, slightly halophilic, thiosulfate-reducing bacterium from corroding offshore oil wells
    • Magot M, Ravot G, Campaignolle X, Ollivier B, Patel BK, Fardeau ML, Thomas P, Crolet JL, Garcia JL (1997) Dethiosulfovibrio peptidovorans gen. nov., sp. nov., a new anaerobic, slightly halophilic, thiosulfate-reducing bacterium from corroding offshore oil wells. Int J Syst Bacteriol 47: 818-824.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 818-824
    • Magot, M.1    Ravot, G.2    Campaignolle, X.3    Ollivier, B.4    Patel, B.K.5    Fardeau, M.L.6    Thomas, P.7    Crolet, J.L.8    Garcia, J.L.9
  • 27
    • 0027460328 scopus 로고
    • Profiling of complex microbial population by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial population by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59: 695-700.
    • (1993) Appl Environ Microbiol , vol.59 , pp. 695-700
    • Muyzer, G.1    de Waal, E.C.2    Uitterlinden, A.G.3
  • 28
    • 0029474439 scopus 로고
    • Occurrence and geochemical activity of microorganisms in high-temperature water-flooded oil fields of Kazakhstan and Western Siberia
    • Nazina TN, Ivanova AE, Borzenkov IA, Belyaev SS, Ivanov MV (1995) Occurrence and geochemical activity of microorganisms in high-temperature water-flooded oil fields of Kazakhstan and Western Siberia. Geomicrobiol J 13: 181-192.
    • (1995) Geomicrobiol J , vol.13 , pp. 181-192
    • Nazina, T.N.1    Ivanova, A.E.2    Borzenkov, I.A.3    Belyaev, S.S.4    Ivanov, M.V.5
  • 31
    • 73349103757 scopus 로고    scopus 로고
    • Coupling hydrocarbon degradation to anaerobic respiration and mineral diagenesis: theoretical constraints
    • Onstott TC, Hinton SM, Silver BJ, King HE Jr (2010) Coupling hydrocarbon degradation to anaerobic respiration and mineral diagenesis: theoretical constraints. Geobiology 8: 69-88.
    • (2010) Geobiology , vol.8 , pp. 69-88
    • Onstott, T.C.1    Hinton, S.M.2    Silver, B.J.3    King Jr., H.E.4
  • 32
    • 0033952662 scopus 로고    scopus 로고
    • Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs
    • Orphan VJ, Taylor LT, Hafenbradl D, Delong EF (2000) Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs. Appl Environ Microbiol 66: 700-711.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 700-711
    • Orphan, V.J.1    Taylor, L.T.2    Hafenbradl, D.3    Delong, E.F.4
  • 33
    • 34249091345 scopus 로고    scopus 로고
    • Temperature activation of organic matter and minerals during burial has the potential to sustain the deep biosphere over geological timescales
    • Parkes RJ, Wellsbury P, Mather ID, Cobb SJ, Cragg BA, Hornibrook ERC, Horsfield B (2007) Temperature activation of organic matter and minerals during burial has the potential to sustain the deep biosphere over geological timescales. Org Geochem 38: 845-852.
    • (2007) Org Geochem , vol.38 , pp. 845-852
    • Parkes, R.J.1    Wellsbury, P.2    Mather, I.D.3    Cobb, S.J.4    Cragg, B.A.5    Hornibrook, E.R.C.6    Horsfield, B.7
  • 35
    • 80051677851 scopus 로고    scopus 로고
    • Comparison of microbial community compositions of injection and production well samples in a long-term water-flooded petroleum reservoir
    • Ren HY, Zhang XJ, Song ZY, Rupert W, Gao GJ, Guo SX, Zhao LP (2011) Comparison of microbial community compositions of injection and production well samples in a long-term water-flooded petroleum reservoir. PLoS One 6: e23258.
    • (2011) PLoS One , vol.6
    • Ren, H.Y.1    Zhang, X.J.2    Song, Z.Y.3    Rupert, W.4    Gao, G.J.5    Guo, S.X.6    Zhao, L.P.7
  • 36
    • 0034013150 scopus 로고    scopus 로고
    • Microbial diversity at 83 degrees C in Calcite Springs, Yellowstone National Park: another environment where the Aquificales and "Korarchaeota" coexist
    • Reysenbach AL, Ehringer M, Hershberger K (2000) Microbial diversity at 83 degrees C in Calcite Springs, Yellowstone National Park: another environment where the Aquificales and "Korarchaeota" coexist. Extremophiles 4: 61-67.
    • (2000) Extremophiles , vol.4 , pp. 61-67
    • Reysenbach, A.L.1    Ehringer, M.2    Hershberger, K.3
  • 37
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 39
    • 53049088150 scopus 로고    scopus 로고
    • Biotechnology in petroleum recovery: the microbial EOR
    • Sen R (2008) Biotechnology in petroleum recovery: the microbial EOR. Prog Energy Combust Sci 34: 714-724.
    • (2008) Prog Energy Combust Sci , vol.34 , pp. 714-724
    • Sen, R.1
  • 41
    • 0028028182 scopus 로고
    • Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44: 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 42
    • 0028995014 scopus 로고
    • Canonical correspondence analysis and related multivariate methods in aquatic ecology
    • ter Braak CJF, Verdonschot PFM (1995) Canonical correspondence analysis and related multivariate methods in aquatic ecology. Aquat Sci 57: 255-289.
    • (1995) Aquat Sci , vol.57 , pp. 255-289
    • ter Braak, C.J.F.1    Verdonschot, P.F.M.2
  • 43
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 44
    • 79958017622 scopus 로고    scopus 로고
    • Contribution of Crenarchaeota and Bacteria to autotrophy in the North Atlantic interior
    • Varela MM, van Aken HM, Sintes E, Reinthaler T, Herndl GJ (2011) Contribution of Crenarchaeota and Bacteria to autotrophy in the North Atlantic interior. Environ Microbiol 13: 1524-1533.
    • (2011) Environ Microbiol , vol.13 , pp. 1524-1533
    • Varela, M.M.1    van Aken, H.M.2    Sintes, E.3    Reinthaler, T.4    Herndl, G.J.5
  • 45
    • 79957984323 scopus 로고    scopus 로고
    • Production-related petroleum microbiology: progress and prospects
    • Voordouw G (2011) Production-related petroleum microbiology: progress and prospects. Curr Opin Biotechnol 22: 401-405.
    • (2011) Curr Opin Biotechnol , vol.22 , pp. 401-405
    • Voordouw, G.1
  • 46
    • 43749091537 scopus 로고    scopus 로고
    • Monitoring exogenous and indigenous bacteria by PCR-DGGE technology during the process of microbial enhanced oil recovery
    • Wang J, Ma T, Zhao LX, Lv JH, Li GQ, Zhang H, Zhao B, Liang FL, Liu RL (2008) Monitoring exogenous and indigenous bacteria by PCR-DGGE technology during the process of microbial enhanced oil recovery. J Ind Microbiol Biotechnol 35: 619-628.
    • (2008) J Ind Microbiol Biotechnol , vol.35 , pp. 619-628
    • Wang, J.1    Ma, T.2    Zhao, L.X.3    Lv, J.H.4    Li, G.Q.5    Zhang, H.6    Zhao, B.7    Liang, F.L.8    Liu, R.L.9
  • 47
    • 0035370088 scopus 로고    scopus 로고
    • Anaerobic biodegradation of saturated and aromatic hydrocarbons
    • Widdel F, Rabus R (2001) Anaerobic biodegradation of saturated and aromatic hydrocarbons. Curr Opin Biotechnol 12: 259-276.
    • (2001) Curr Opin Biotechnol , vol.12 , pp. 259-276
    • Widdel, F.1    Rabus, R.2
  • 48
    • 79953781171 scopus 로고    scopus 로고
    • Microbial diversity with dominance of 16S rRNA gene sequences with high GC contents at 74 and 98 °C subsurface crude oil deposits in Japan
    • Yamane K, Hattori Y, Ohtagaki H, Fujiwara K (2011) Microbial diversity with dominance of 16S rRNA gene sequences with high GC contents at 74 and 98 °C subsurface crude oil deposits in Japan. FEMS Microbiol Ecol 76: 220-235.
    • (2011) FEMS Microbiol Ecol , vol.76 , pp. 220-235
    • Yamane, K.1    Hattori, Y.2    Ohtagaki, H.3    Fujiwara, K.4
  • 49
    • 12244257532 scopus 로고    scopus 로고
    • Geographic and environmental sources of variation in lake bacterial community composition
    • Yannarell AC, Triplett EW (2005) Geographic and environmental sources of variation in lake bacterial community composition. Appl Environ Microbiol 71: 227-239.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 227-239
    • Yannarell, A.C.1    Triplett, E.W.2
  • 51
    • 59449110673 scopus 로고    scopus 로고
    • Microbial process in oil fields: culprits, problems, and opportunities
    • Youssef N, Elshahed MS, Mclnerney MJ (2009) Microbial process in oil fields: culprits, problems, and opportunities. Adv Appl Microbiol 66: 141-251.
    • (2009) Adv Appl Microbiol , vol.66 , pp. 141-251
    • Youssef, N.1    Elshahed, M.S.2    Mclnerney, M.J.3
  • 53
    • 78649318757 scopus 로고    scopus 로고
    • Response of microbial community structure to microbial plugging in a mesothermic petroleum reservoir in China
    • Zhang F, She YH, Ma SS, Hu JM, Banat IM, Hou DJ (2010) Response of microbial community structure to microbial plugging in a mesothermic petroleum reservoir in China. Appl Microbiol Biotechnol 88: 1413-1422.
    • (2010) Appl Microbiol Biotechnol , vol.88 , pp. 1413-1422
    • Zhang, F.1    She, Y.H.2    Ma, S.S.3    Hu, J.M.4    Banat, I.M.5    Hou, D.J.6


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