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Volumn 1182, Issue , 2014, Pages 105-119

Measuring expression levels of small regulatory RNA molecules from body fluids and formalin-fixed, paraffin-embedded samples

Author keywords

Cancer; FFPE; miRNA; RT qPCR; Stem loop; Urine

Indexed keywords

EPIDERMAL GROWTH FACTOR RECEPTOR ANTIBODY; FORMALDEHYDE; HSA MIR 325; HSA MIR 515 3P; MICRORNA; MICRORNA 155; MONOCLONAL ANTIBODY; OLIGONUCLEOTIDE; PARAFFIN; SMALL NUCLEOLAR RNA; UNCLASSIFIED DRUG; MIRN325 MICRORNA, HUMAN; MIRN515 MICRORNA, HUMAN;

EID: 84925884451     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-4939-1062-5_10     Document Type: Article
Times cited : (5)

References (25)
  • 1
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, biogenesis, mechanism, and function
    • Bartel DP (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116: 281-297
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 2
    • 78751477191 scopus 로고    scopus 로고
    • Gene silencing by microRNAs: Contributions of translational repression and mRNA decay
    • Huntzinger E, Izaurralde E (2011) Gene silencing by microRNAs: contributions of translational repression and mRNA decay. Nat Rev Genet 12: 99-110
    • (2011) Nat Rev Genet , vol.12 , pp. 99-110
    • Huntzinger, E.1    Izaurralde, E.2
  • 3
    • 77957664647 scopus 로고    scopus 로고
    • MicroRNAs as regulators of differentiation and cell fate decisions
    • Ivey KN, Srivastava D (2010) MicroRNAs as regulators of differentiation and cell fate decisions. Cell Stem Cell 7: 36-41
    • (2010) Cell Stem Cell , vol.7 , pp. 36-41
    • Ivey, K.N.1    Srivastava, D.2
  • 4
    • 47849125676 scopus 로고    scopus 로고
    • MicroRNAs: New regulators of immune cell development and function
    • Baltimore D, Boldin MP, O'Connell RM et al (2008) MicroRNAs: new regulators of immune cell development and function. Nat Immunol 9: 839-845
    • (2008) Nat Immunol , vol.9 , pp. 839-845
    • Baltimore, D.1    Boldin, M.P.2    O'connell, R.M.3
  • 6
    • 79958237903 scopus 로고    scopus 로고
    • Cancer and neurodegenerative disorders: Pathogenic convergence through microRNA regulation
    • Du L, Pertsemlidis A (2011) Cancer and neurodegenerative disorders: pathogenic convergence through microRNA regulation. J Mol Cell Biol 3: 176-180
    • (2011) J Mol Cell Biol , vol.3 , pp. 176-180
    • Du, L.1    Pertsemlidis, A.2
  • 7
    • 78149484489 scopus 로고    scopus 로고
    • The microRNA spectrum in 12 body fl uids
    • Weber JA, Baxter DH, Zhang S et al (2010) The microRNA spectrum in 12 body fl uids. Clin Chem 56: 1733-1741
    • (2010) Clin Chem , vol.56 , pp. 1733-1741
    • Weber, J.A.1    Baxter, D.H.2    Zhang, S.3
  • 8
    • 34748837455 scopus 로고    scopus 로고
    • Systematic analysis of microRNA expression of RNA extracted from fresh frozen and formalin-fi xed paraffi n-embedded samples
    • Xi Y, Nakajima G, Gavin E et al (2007) Systematic analysis of microRNA expression of RNA extracted from fresh frozen and formalin-fi xed paraffi n-embedded samples. RNA 13: 1668-1674
    • (2007) RNA , vol.13 , pp. 1668-1674
    • Xi, Y.1    Nakajima, G.2    Gavin, E.3
  • 9
    • 77952962186 scopus 로고    scopus 로고
    • Robust microRNA stability in degraded RNA preparations from human tissue and cell samples
    • Jung M, Schaefer A, Steiner I et al (2010) Robust microRNA stability in degraded RNA preparations from human tissue and cell samples. Clin Chem 56: 998-1006
    • (2010) Clin Chem , vol.56 , pp. 998-1006
    • Jung, M.1    Schaefer, A.2    Steiner, I.3
  • 10
    • 82255173788 scopus 로고    scopus 로고
    • Micro-RNAs as diagnostic or prognostic markers in human epithelial malignancies
    • Hui A, How C, Ito E et al (2011) Micro-RNAs as diagnostic or prognostic markers in human epithelial malignancies. BMC Cancer 11: 500
    • (2011) BMC Cancer , vol.11 , pp. 500
    • Hui, A.1    How, C.2    Ito, E.3
  • 11
    • 84884907522 scopus 로고    scopus 로고
    • Using microRNA profi ling in urine samples to develop a non-invasive test for bladder cancer
    • Mengual L, Lozano JJ, Ingelmo-Torres M et al (2013) Using microRNA profi ling in urine samples to develop a non-invasive test for bladder cancer. Int J Cancer 133: 2631-2641
    • (2013) Int J Cancer , vol.133 , pp. 2631-2641
    • Mengual, L.1    Lozano, J.J.2    Ingelmo-Torres, M.3
  • 12
    • 84870684707 scopus 로고    scopus 로고
    • MicroRNAs-novel regulators of systemic lupus erythematosus pathogenesis
    • Shen N, Liang D, Tang Y et al (2012) MicroRNAs-novel regulators of systemic lupus erythematosus pathogenesis. Nat Rev Rheumatol 8: 701-709
    • (2012) Nat Rev Rheumatol , vol.8 , pp. 701-709
    • Shen, N.1    Liang, D.2    Tang, Y.3
  • 13
    • 77954315865 scopus 로고    scopus 로고
    • MicroRNAs as biomarkers in rheumatic diseases
    • Alevizos I, Illei GG (2010) MicroRNAs as biomarkers in rheumatic diseases. Nat Rev Rheumatol 6: 391-398
    • (2010) Nat Rev Rheumatol , vol.6 , pp. 391-398
    • Alevizos, I.1    Illei, G.G.2
  • 14
    • 33748624597 scopus 로고    scopus 로고
    • Optimized high-Throughput microRNA expression profi ling provides novel biomarker assessment of clinical prostate and breast cancer biopsies
    • Mattie MD, Benz CC, Bowers J et al (2006) Optimized high-Throughput microRNA expression profi ling provides novel biomarker assessment of clinical prostate and breast cancer biopsies. Mol Cancer 5: 24
    • (2006) Mol Cancer , vol.5 , pp. 24
    • Mattie, M.D.1    Benz, C.C.2    Bowers, J.3
  • 15
    • 41849114566 scopus 로고    scopus 로고
    • MicroRNAs accurately identify cancer tissue origin
    • Rosenfeld N, Aharonov R, Meiri E et al (2008) MicroRNAs accurately identify cancer tissue origin. Nat Biotechnol 26: 462-469
    • (2008) Nat Biotechnol , vol.26 , pp. 462-469
    • Rosenfeld, N.1    Aharonov, R.2    Meiri, E.3
  • 16
    • 20444460289 scopus 로고    scopus 로고
    • MicroRNA expression profi les classify human cancers
    • Lu J, Getz G, Miska EA et al (2005) MicroRNA expression profi les classify human cancers. Nature 435: 834-838
    • (2005) Nature , vol.435 , pp. 834-838
    • Lu, J.1    Getz, G.2    Miska, E.A.3
  • 17
    • 2542626605 scopus 로고    scopus 로고
    • Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival
    • Takamizawa J, Konishi H, Yanagisawa K et al (2004) Reduced expression of the let-7 microRNAs in human lung cancers in association with shortened postoperative survival. Cancer Res 64: 3753-3756
    • (2004) Cancer Res , vol.64 , pp. 3753-3756
    • Takamizawa, J.1    Konishi, H.2    Yanagisawa, K.3
  • 18
    • 27544495514 scopus 로고    scopus 로고
    • A polycistronic microRNA cluster, miR-17-92, is overexpressed in human lung cancers and enhances cell proliferation
    • Hayashita Y, Osada H, Tatematsu Y et al (2005) A polycistronic microRNA cluster, miR-17-92, is overexpressed in human lung cancers and enhances cell proliferation. Cancer Res 65: 9628-9632
    • (2005) Cancer Res , vol.65 , pp. 9628-9632
    • Hayashita, Y.1    Osada, H.2    Tatematsu, Y.3
  • 19
    • 70349169955 scopus 로고    scopus 로고
    • ERalpha-negative and triple negative breast cancer: Molecular features and potential therapeutic approaches
    • Chen JQ, Russo J (2009) ERalpha-negative and triple negative breast cancer: molecular features and potential therapeutic approaches. Biochim Biophys Acta 1796: 162-175
    • (2009) Biochim Biophys Acta , vol.1796 , pp. 162-175
    • Chen, J.Q.1    Russo, J.2
  • 20
    • 29144470346 scopus 로고    scopus 로고
    • Real-Time quantifi cation of microRNAs by stem-loop RT-PCR
    • Chen C, Ridzon DA, Broomer AJ et al (2005) Real-Time quantifi cation of microRNAs by stem-loop RT-PCR. Nucleic Acids Res 33: e179
    • (2005) Nucleic Acids Res , vol.33
    • Chen, C.1    Ridzon, D.A.2    Broomer, A.J.3
  • 21
    • 38849140922 scopus 로고    scopus 로고
    • Protocol: A highly sensitive RT-PCR method for detection and quantifi cation of microRNAs
    • Varkonyi-Gasic E, Wu R, Wood M et al (2007) Protocol: a highly sensitive RT-PCR method for detection and quantifi cation of microRNAs. Plant Methods 3: 12
    • (2007) Plant Methods , vol.3 , pp. 12
    • Varkonyi-Gasic, E.1    Wu, R.2    Wood, M.3
  • 22
    • 84873137070 scopus 로고    scopus 로고
    • A versatile method to design stem-loop primer-based quantitative PCR assays for detecting small regulatory RNA molecules
    • Czimmerer Z, Hulvely J, Simandi Z et al (2013) A versatile method to design stem-loop primer-based quantitative PCR assays for detecting small regulatory RNA molecules. PLoS One 8: e55168
    • (2013) PLoS One , vol.8
    • Czimmerer, Z.1    Hulvely, J.2    Simandi, Z.3
  • 23
    • 79952577682 scopus 로고    scopus 로고
    • Clinicopathological and prognostic value of microRNA-21 and microRNA-155 in colorectal cancer
    • Shibuya H, Iinuma H, Shimada R et al (2010) Clinicopathological and prognostic value of microRNA-21 and microRNA-155 in colorectal cancer. Oncology 79: 313-320
    • (2010) Oncology , vol.79 , pp. 313-320
    • Shibuya, H.1    Iinuma, H.2    Shimada, R.3
  • 24
    • 77649229497 scopus 로고    scopus 로고
    • MRNA and microRNA quality control for RT-qPCR analysis
    • Becker C, Hammerle-Fickinger A, Riedmaier I et al (2010) mRNA and microRNA quality control for RT-qPCR analysis. Methods 50: 237-243
    • (2010) Methods , vol.50 , pp. 237-243
    • Becker, C.1    Hammerle-Fickinger, A.2    Riedmaier, I.3
  • 25
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-Time quantitative PCR and the 2(-Delta Delta C(T)) method
    • Livak KJ, Schmittgen TD (2001) Analysis of relative gene expression data using real-Time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25: 402-408
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.