메뉴 건너뛰기




Volumn 33, Issue , 2015, Pages 260-267

Resource recovery from wastewater: Application of meta-omics to phosphorus and carbon management

Author keywords

[No Author keywords available]

Indexed keywords

ANAEROBIC DIGESTION; CARBON; MOBILE SECURITY; MOLECULAR BIOLOGY; PHOSPHORUS; PROTEINS; RECOVERY; WASTEWATER TREATMENT;

EID: 84925603585     PISSN: 09581669     EISSN: 18790429     Source Type: Journal    
DOI: 10.1016/j.copbio.2015.03.003     Document Type: Review
Times cited : (21)

References (52)
  • 1
    • 74549172587 scopus 로고    scopus 로고
    • Evolving urban water and residuals management paradigms: water reclamation and reuse, decentralization, and resource recovery
    • Daigger G.T. Evolving urban water and residuals management paradigms: water reclamation and reuse, decentralization, and resource recovery. Water Environ Res 2009, 81:809-823.
    • (2009) Water Environ Res , vol.81 , pp. 809-823
    • Daigger, G.T.1
  • 3
    • 80052218917 scopus 로고    scopus 로고
    • Domestic wastewater treatment as a net energy producer-can this be achieved?
    • McCarty P.L., Bae J., Kim J. Domestic wastewater treatment as a net energy producer-can this be achieved?. Environ Sci Technol 2011, 45:7100-7106.
    • (2011) Environ Sci Technol , vol.45 , pp. 7100-7106
    • McCarty, P.L.1    Bae, J.2    Kim, J.3
  • 6
    • 84894482378 scopus 로고    scopus 로고
    • Dual potential of microalgae as a sustainable biofuel feedstock and animal feed
    • Lum K.K., Kim J., Lei X.G. Dual potential of microalgae as a sustainable biofuel feedstock and animal feed. J Anim Sci Biotechnol 2013, 4:53.
    • (2013) J Anim Sci Biotechnol , vol.4 , pp. 53
    • Lum, K.K.1    Kim, J.2    Lei, X.G.3
  • 8
    • 0036421765 scopus 로고    scopus 로고
    • A review and update of the microbiology of enhanced biological phosphorus removal in wastewater treatment plants
    • Blackall L.L., Crocetti G.R., Saunders A.M., Bond P.L. A review and update of the microbiology of enhanced biological phosphorus removal in wastewater treatment plants. Antonie Van Leeuwenhoek 2002, 81:681-691.
    • (2002) Antonie Van Leeuwenhoek , vol.81 , pp. 681-691
    • Blackall, L.L.1    Crocetti, G.R.2    Saunders, A.M.3    Bond, P.L.4
  • 9
    • 0022795893 scopus 로고
    • Fundamentals of anaerobic digestion of wastewater sludges
    • Parkin G.F., Owen W.F. Fundamentals of anaerobic digestion of wastewater sludges. J Environ Eng 1986, 112:867-920.
    • (1986) J Environ Eng , vol.112 , pp. 867-920
    • Parkin, G.F.1    Owen, W.F.2
  • 10
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies-the next generation
    • Metzker M.L. Sequencing technologies-the next generation. Nat Rev Genet 2009, 11:31-46.
    • (2009) Nat Rev Genet , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 11
    • 67651173106 scopus 로고    scopus 로고
    • Proteomics by mass spectrometry: approaches. advances, and applications
    • Yates J.R., Ruse C.I., Nakorchevsky A. Proteomics by mass spectrometry: approaches. advances, and applications. Annu Rev Biomed Eng 2009, 11:49-79.
    • (2009) Annu Rev Biomed Eng , vol.11 , pp. 49-79
    • Yates, J.R.1    Ruse, C.I.2    Nakorchevsky, A.3
  • 14
    • 84869886967 scopus 로고    scopus 로고
    • Phosphorus recovery from wastewater through microbial processes
    • Yuan Z., Pratt S., Batstone D.J. Phosphorus recovery from wastewater through microbial processes. Curr Opin Biotechnol 2012, 23:878-883.
    • (2012) Curr Opin Biotechnol , vol.23 , pp. 878-883
    • Yuan, Z.1    Pratt, S.2    Batstone, D.J.3
  • 15
    • 0016719542 scopus 로고
    • Microbiological basis of phosphate removal in the activated sludge process for the treatment of wastewater
    • Fuhs G.W., Chen M. Microbiological basis of phosphate removal in the activated sludge process for the treatment of wastewater. Microb Ecol 1975, 2:119-138.
    • (1975) Microb Ecol , vol.2 , pp. 119-138
    • Fuhs, G.W.1    Chen, M.2
  • 16
    • 0032822623 scopus 로고    scopus 로고
    • Enrichment, phylogenetic analysis and detection of a bacterium that performs enhanced biological phosphate removal in activated sludge
    • Hesselmann R.P., Werlen C., Hahn D., van der Meer J.R., Zehnder A.J. Enrichment, phylogenetic analysis and detection of a bacterium that performs enhanced biological phosphate removal in activated sludge. Syst Appl Microbiol 1999, 22:454-465.
    • (1999) Syst Appl Microbiol , vol.22 , pp. 454-465
    • Hesselmann, R.P.1    Werlen, C.2    Hahn, D.3    van der Meer, J.R.4    Zehnder, A.J.5
  • 17
    • 0034051181 scopus 로고    scopus 로고
    • Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation
    • Crocetti G.R., Hugenholtz P., Bond P.L., Schuler A., Keller J., Jenkins D., Blackall L.L. Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation. Appl Environ Microbiol 2000, 66:1175-1182.
    • (2000) Appl Environ Microbiol , vol.66 , pp. 1175-1182
    • Crocetti, G.R.1    Hugenholtz, P.2    Bond, P.L.3    Schuler, A.4    Keller, J.5    Jenkins, D.6    Blackall, L.L.7
  • 18
    • 84891400490 scopus 로고    scopus 로고
    • Candidatus Accumulibacter phosphatis: elusive bacterium responsible for enhanced biological phosphorus removal
    • Kang D.-W., Noguera D.R. Candidatus Accumulibacter phosphatis: elusive bacterium responsible for enhanced biological phosphorus removal. J Environ Eng 2014, 140:2-10.
    • (2014) J Environ Eng , vol.140 , pp. 2-10
    • Kang, D.-W.1    Noguera, D.R.2
  • 20
    • 84888199944 scopus 로고    scopus 로고
    • Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal
    • Flowers J.J., He S., Malfatti S., Rio Td, Tringe S.G., Hugenholtz P., McMahon K.D. Comparative genomics of two 'Candidatus Accumulibacter' clades performing biological phosphorus removal. ISME J 2013, 7:2301-2314.
    • (2013) ISME J , vol.7 , pp. 2301-2314
    • Flowers, J.J.1    He, S.2    Malfatti, S.3    Rio, Td4    Tringe, S.G.5    Hugenholtz, P.6    McMahon, K.D.7
  • 22
    • 84906879135 scopus 로고    scopus 로고
    • Genome reconstruction and gene expression of 'Candidatus Accumulibacter phosphatis' Clade IB performing biological phosphorus removal
    • Mao Y., Yu K., Xia Y., Chao Y., Zhang T. Genome reconstruction and gene expression of 'Candidatus Accumulibacter phosphatis' Clade IB performing biological phosphorus removal. Environ Sci Technol 2014, 48:10363-10371.
    • (2014) Environ Sci Technol , vol.48 , pp. 10363-10371
    • Mao, Y.1    Yu, K.2    Xia, Y.3    Chao, Y.4    Zhang, T.5
  • 23
    • 84861346969 scopus 로고    scopus 로고
    • A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal
    • Albertsen M., Hansen L.B.S., Saunders A.M., Nielsen P.H., Nielsen K.L. A metagenome of a full-scale microbial community carrying out enhanced biological phosphorus removal. ISME J 2012, 6:1094-1106.
    • (2012) ISME J , vol.6 , pp. 1094-1106
    • Albertsen, M.1    Hansen, L.B.S.2    Saunders, A.M.3    Nielsen, P.H.4    Nielsen, K.L.5
  • 24
    • 77953124142 scopus 로고    scopus 로고
    • Metatranscriptomic array analysis of 'Candidatus Accumulibacter phosphatis'-enriched enhanced biological phosphorus removal sludge
    • He S., Kunin V., Haynes M., Garcia Martin H., Ivanova N., Rohwer F., Hugenholtz P., Mcmahon K.D. Metatranscriptomic array analysis of 'Candidatus Accumulibacter phosphatis'-enriched enhanced biological phosphorus removal sludge. Environ Microbiol 2010, 12:1205-1217.
    • (2010) Environ Microbiol , vol.12 , pp. 1205-1217
    • He, S.1    Kunin, V.2    Haynes, M.3    Garcia Martin, H.4    Ivanova, N.5    Rohwer, F.6    Hugenholtz, P.7    Mcmahon, K.D.8
  • 25
    • 49449111457 scopus 로고    scopus 로고
    • Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
    • Wilmes P., Andersson A.F., Lefsrud M.G., Wexler M., Shah M., Zhang B., Hettich R.L., Bond P.L., VerBerkmoes N., Banfield C.J.F. Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal. ISME J 2008, 2:853-864.
    • (2008) ISME J , vol.2 , pp. 853-864
    • Wilmes, P.1    Andersson, A.F.2    Lefsrud, M.G.3    Wexler, M.4    Shah, M.5    Zhang, B.6    Hettich, R.L.7    Bond, P.L.8    VerBerkmoes, N.9    Banfield, C.J.F.10
  • 26
    • 84922535153 scopus 로고    scopus 로고
    • Anaerobic treatment of low-strength wastewater: a comparison between single and staged anaerobic fluidized bed membrane bioreactors
    • Bae J., Shin C., Lee E., Kim J., McCarty P.L. Anaerobic treatment of low-strength wastewater: a comparison between single and staged anaerobic fluidized bed membrane bioreactors. Bioresour Technol 2014, 165:75-80.
    • (2014) Bioresour Technol , vol.165 , pp. 75-80
    • Bae, J.1    Shin, C.2    Lee, E.3    Kim, J.4    McCarty, P.L.5
  • 28
    • 84921673615 scopus 로고    scopus 로고
    • Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters
    • Vanwonterghem I., Jensen P.D., Dennis P.G., Hugenholtz P., Rabaey K., Tyson G.W. Deterministic processes guide long-term synchronised population dynamics in replicate anaerobic digesters. ISME J 2014, 8:2015-2028.
    • (2014) ISME J , vol.8 , pp. 2015-2028
    • Vanwonterghem, I.1    Jensen, P.D.2    Dennis, P.G.3    Hugenholtz, P.4    Rabaey, K.5    Tyson, G.W.6
  • 30
    • 84928253889 scopus 로고    scopus 로고
    • The nexus of syntrophy-associated microbiota in anaerobic digestion revealed by long-term enrichment and community survey
    • Narihiro T., Nobu M.K., Kim N.-K., Kamagata Y., Liu W.-T. The nexus of syntrophy-associated microbiota in anaerobic digestion revealed by long-term enrichment and community survey. Environ Microbiol 2014, 10.1111/1462-2920.12616.
    • (2014) Environ Microbiol
    • Narihiro, T.1    Nobu, M.K.2    Kim, N.-K.3    Kamagata, Y.4    Liu, W.-T.5
  • 31
    • 84904268834 scopus 로고    scopus 로고
    • Characterization of a methanogenic community within an algal fed anaerobic digester
    • Ellis J.T., Tramp C., Sims R.C., Miller C.D. Characterization of a methanogenic community within an algal fed anaerobic digester. ISRN Microbiol 2012, 2012. 10.5402/2012/753892.
    • (2012) ISRN Microbiol , vol.2012
    • Ellis, J.T.1    Tramp, C.2    Sims, R.C.3    Miller, C.D.4
  • 32
    • 84920736175 scopus 로고    scopus 로고
    • Pyrosequencing of mcrA and archaeal 16S rRNA genes reveals diversity and substrate preference of anaerobic digester methanogen communities
    • Wilkins D., Lu X.-Y., Shen Z., Chen J., Lee P.K.H. Pyrosequencing of mcrA and archaeal 16S rRNA genes reveals diversity and substrate preference of anaerobic digester methanogen communities. Appl Environ Microbiol 2015, 81:604-613.
    • (2015) Appl Environ Microbiol , vol.81 , pp. 604-613
    • Wilkins, D.1    Lu, X.-Y.2    Shen, Z.3    Chen, J.4    Lee, P.K.H.5
  • 33
    • 84872151297 scopus 로고    scopus 로고
    • A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor
    • Li A., Chu Y., Wang X., Ren L., Yu J., Liu X., Yan J., Zhang L., Wu S., Li S. A pyrosequencing-based metagenomic study of methane-producing microbial community in solid-state biogas reactor. Biotechnol Biofuels 2013, 6:3.
    • (2013) Biotechnol Biofuels , vol.6 , pp. 3
    • Li, A.1    Chu, Y.2    Wang, X.3    Ren, L.4    Yu, J.5    Liu, X.6    Yan, J.7    Zhang, L.8    Wu, S.9    Li, S.10
  • 34
    • 84861801813 scopus 로고    scopus 로고
    • Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing
    • Wirth R., Kovacs E., Maroti G., Bagi Z., Rakhely G., Kovacs K. Characterization of a biogas-producing microbial community by short-read next generation DNA sequencing. Biotechnol Biofuels 2012, 5:41.
    • (2012) Biotechnol Biofuels , vol.5 , pp. 41
    • Wirth, R.1    Kovacs, E.2    Maroti, G.3    Bagi, Z.4    Rakhely, G.5    Kovacs, K.6
  • 35
    • 84875031108 scopus 로고    scopus 로고
    • Towards a metagenomic understanding on enhanced biomethane production from waste activated sludge after pH 10 pretreatment
    • Wong M.T., Zhang D., Li J., Hui R.K.H., Tun H.M., Brar M.S., Park T.-J., Chen Y., Leung F. Towards a metagenomic understanding on enhanced biomethane production from waste activated sludge after pH 10 pretreatment. Biotechnol Biofuels 2013, 6:38.
    • (2013) Biotechnol Biofuels , vol.6 , pp. 38
    • Wong, M.T.1    Zhang, D.2    Li, J.3    Hui, R.K.H.4    Tun, H.M.5    Brar, M.S.6    Park, T.-J.7    Chen, Y.8    Leung, F.9
  • 36
    • 84988810585 scopus 로고    scopus 로고
    • A metagenomic study of the microbial communities in four parallel biogas reactors
    • Solli L., Håvelsrud O., Horn S., Rike A. A metagenomic study of the microbial communities in four parallel biogas reactors. Biotechnol Biofuels 2014, 7:146.
    • (2014) Biotechnol Biofuels , vol.7 , pp. 146
    • Solli, L.1    Håvelsrud, O.2    Horn, S.3    Rike, A.4
  • 39
    • 67349232764 scopus 로고    scopus 로고
    • Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing
    • Kröber M., Bekel T., Diaz N.N., Goesmann A., Jaenicke S., Krause L., Miller D., Runte K.J., Viehöver P., Pühler A., et al. Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing. J Biotechnol 2009, 142:38-49.
    • (2009) J Biotechnol , vol.142 , pp. 38-49
    • Kröber, M.1    Bekel, T.2    Diaz, N.N.3    Goesmann, A.4    Jaenicke, S.5    Krause, L.6    Miller, D.7    Runte, K.J.8    Viehöver, P.9    Pühler, A.10
  • 40
    • 49949108153 scopus 로고    scopus 로고
    • The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology
    • Schlüter A., Bekel T., Diaz N.N., Dondrup M., Eichenlaub R., Gartemann K.-H., Krahn I., Krause L., Krömeke H., Kruse O., et al. The metagenome of a biogas-producing microbial community of a production-scale biogas plant fermenter analysed by the 454-pyrosequencing technology. J Biotechnol 2008, 136:77-90.
    • (2008) J Biotechnol , vol.136 , pp. 77-90
    • Schlüter, A.1    Bekel, T.2    Diaz, N.N.3    Dondrup, M.4    Eichenlaub, R.5    Gartemann, K.-H.6    Krahn, I.7    Krause, L.8    Krömeke, H.9    Kruse, O.10
  • 41
    • 84903819288 scopus 로고    scopus 로고
    • Metagenomic analysis of sludge from full-scale anaerobic digesters operated in municipal wastewater treatment plants
    • Yang Y., Yu K., Xia Y., Lau F.K., Tang D.W., Fung W., Fang H.P., Zhang T. Metagenomic analysis of sludge from full-scale anaerobic digesters operated in municipal wastewater treatment plants. Appl Microbiol Biotechnol 2014, 98:5709-5718.
    • (2014) Appl Microbiol Biotechnol , vol.98 , pp. 5709-5718
    • Yang, Y.1    Yu, K.2    Xia, Y.3    Lau, F.K.4    Tang, D.W.5    Fung, W.6    Fang, H.P.7    Zhang, T.8
  • 42
    • 84907682734 scopus 로고    scopus 로고
    • GroopM: an automated tool for the recovery of population genomes from related metagenomes
    • e409v401
    • Imelfort M., Parks D., Woodcroft B., Dennis P., Hugenholtz P., Tyson G. GroopM: an automated tool for the recovery of population genomes from related metagenomes. PeerJ PrePrints 2014, 2. e409v401.
    • (2014) PeerJ PrePrints , vol.2
    • Imelfort, M.1    Parks, D.2    Woodcroft, B.3    Dennis, P.4    Hugenholtz, P.5    Tyson, G.6
  • 43
    • 84875832926 scopus 로고    scopus 로고
    • The binning of metagenomic contigs for microbial physiology of mixed cultures
    • Strous M., Kraft B., Bisdorf R., Tegetmeyer H.E. The binning of metagenomic contigs for microbial physiology of mixed cultures. Front Microbiol 2012, 3:410.
    • (2012) Front Microbiol , vol.3 , pp. 410
    • Strous, M.1    Kraft, B.2    Bisdorf, R.3    Tegetmeyer, H.E.4
  • 44
    • 84925636192 scopus 로고    scopus 로고
    • MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm
    • Wu Y.-W., Tang Y.-H., Tringe S.G., Simmons B.A., Singer S.W. MaxBin: an automated binning method to recover individual genomes from metagenomes using an expectation-maximization algorithm. Microbiome 2014, 2.
    • (2014) Microbiome , vol.2
    • Wu, Y.-W.1    Tang, Y.-H.2    Tringe, S.G.3    Simmons, B.A.4    Singer, S.W.5
  • 46
    • 84879603340 scopus 로고    scopus 로고
    • Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation
    • Hanreich A., Schimpf U., Zakrzewski M., Schlüter A., Benndorf D., Heyer R., Rapp E., Pühler A., Reichl U., Klocke M. Metagenome and metaproteome analyses of microbial communities in mesophilic biogas-producing anaerobic batch fermentations indicate concerted plant carbohydrate degradation. Syst Appl Microbiol 2013, 36:330-338.
    • (2013) Syst Appl Microbiol , vol.36 , pp. 330-338
    • Hanreich, A.1    Schimpf, U.2    Zakrzewski, M.3    Schlüter, A.4    Benndorf, D.5    Heyer, R.6    Rapp, E.7    Pühler, A.8    Reichl, U.9    Klocke, M.10
  • 48
    • 84902368710 scopus 로고    scopus 로고
    • Efficiency of RNA extraction from selected bacteria in the context of biogas production and metatranscriptomics
    • Stark L., Giersch T., Wünschiers R. Efficiency of RNA extraction from selected bacteria in the context of biogas production and metatranscriptomics. Anaerobe 2014, 29:85-90.
    • (2014) Anaerobe , vol.29 , pp. 85-90
    • Stark, L.1    Giersch, T.2    Wünschiers, R.3
  • 49
    • 84890454863 scopus 로고    scopus 로고
    • A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane
    • Rotaru A.-E., Shrestha P.M., Liu F., Shrestha M., Shrestha D., Embree M., Zengler K., Wardman C., Nevin K.P., Lovley D.R. A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane. Energy Environ Sci 2014, 7:408-415.
    • (2014) Energy Environ Sci , vol.7 , pp. 408-415
    • Rotaru, A.-E.1    Shrestha, P.M.2    Liu, F.3    Shrestha, M.4    Shrestha, D.5    Embree, M.6    Zengler, K.7    Wardman, C.8    Nevin, K.P.9    Lovley, D.R.10
  • 50
    • 84891157250 scopus 로고    scopus 로고
    • Metaproteomics of cellulose methanisation under thermophilic conditions reveals a surprisingly high proteolytic activity
    • Lu F., Bize A., Guillot A., Monnet V., Madigou C., Chapleur O., Mazeas L., He P., Bouchez T. Metaproteomics of cellulose methanisation under thermophilic conditions reveals a surprisingly high proteolytic activity. ISME J 2014, 8:88-102.
    • (2014) ISME J , vol.8 , pp. 88-102
    • Lu, F.1    Bize, A.2    Guillot, A.3    Monnet, V.4    Madigou, C.5    Chapleur, O.6    Mazeas, L.7    He, P.8    Bouchez, T.9
  • 51
    • 0037534907 scopus 로고    scopus 로고
    • Peer reviewed: theoretical ecology for engineering biology
    • Curtis T.P., Head I.M., Graham D.W. Peer reviewed: theoretical ecology for engineering biology. Environ Sci Technol 2003, 37:64A-70A.
    • (2003) Environ Sci Technol , vol.37 , pp. 64A-70A
    • Curtis, T.P.1    Head, I.M.2    Graham, D.W.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.