High-precision, automated integration of multiple isothermal titration calorimetric thermograms: New features of NITPIC

Methods

Volumn 76, Issue , 2015, Pages 87-98

  Scheuermann, Thomas H ^a   Brautigam, Chad A ^a  

^a UNIVERSITY OF TEXAS SOUTHWESTERN MEDICAL CENTER   (United States)

Author keywords

Automated processing; Isothermal titration calorimetry; Serial integration; Singular value decomposition

Indexed keywords

CHYMOTRYPSIN A; HYPOXIA INDUCIBLE FACTOR 2ALPHA; PYRUVATE DEHYDROGENASE KINASE 2; SOYBEAN TRYPSIN INHIBITOR;

ACCURACY; ALGORITHM; ARTICLE; AUTOMATION; CALORIMETER; COMPUTER PROGRAM; CONTROLLED STUDY; DATA ANALYSIS; ENTHALPY; GEL PERMEATION CHROMATOGRAPHY; HUMAN; ISOTHERMAL TITRATION CALORIMETRY; PRIORITY JOURNAL; PROTEIN PURIFICATION; SIGNAL NOISE RATIO; THERMOGRAPHY; CALORIMETRY; COMPARATIVE STUDY; INFORMATION PROCESSING; PROCEDURES; THERMODYNAMICS;

AUTOMATIC DATA PROCESSING; CALORIMETRY; SOFTWARE; THERMODYNAMICS;

EID: 84925445801     PISSN: 10462023     EISSN: 10959130     Source Type: Journal    
DOI: 10.1016/j.ymeth.2014.11.024     Document Type: Article

References (27)

1. Pierce M.M., Raman C.S., Nall B.T. Methods 1999, 19:213-221.
2. Oda M., Nakamura H. Genes Cells 2000, 5:319-326.
3. Leavitt S., Freire E. Curr. Opin. Struct. Biol. 2001, 11:560-566.
4. Majhi P.R., Blume A. Langmuir 2001, 17:3844-3851.
5. Jahnke N., Krylova O.O., Hoomann T., Vargas C., Fiedler S., Pohl P., et al. Anal. Chem. 2014, 86:920-927.
6. Vargas C., Klingler J., Keller S. Methods Mol. Biol. 2013, 1033:253-270.
7. Heerklotz H., Tsamaloukas A.D., Keller S. Nat. Protoc. 2009, 4:686-697.
8. Freyer M.W., Lewis E.A. Methods Cell Biol. 2008, 84:79-113.
9. Wiseman T., Williston S., Brandts J.F., Lin L.N. Anal. Biochem. 1989, 179:131-137.
10. Armstrong K.M., Baker B.M. Biophys. J. 2007, 93:597-609.
11. Baker B.M., Murphy K.P. Biophys. J. 1996, 71:2049-2055.
12. Coussens N.P., Schuck P., Zhao H. J. Chem. Thermodyn. 2012, 52:95-107.
13. Ladbury J.E., Williams M.A. Curr. Opin. Struct. Biol. 2004, 14:562-569.
14. Tan A., Tanner J.J., Henzl M.T. Biophys. Chem. 2008, 134:64-71.
15. Houtman J.C.D., Brown P.H., Bowden B., Yamaguchi H., Appella E., Samelson L.E., et al. Protein Sci. 2007, 16:30-42.
16. Freiburger L.A., Auclair K., Mittermaier A.K. ChemBioChem 2009, 10:2871-2873.
17. Freire E. Drug Discov. Today 2008, 13:869-874.
18. Ladbury J.E. Biochem. Soc. Trans. 2010, 38:888-893.
19. Sarver R.W., Bills E., Bolton G., Bratton L.D., Caspers N.L., Dunbar J.B., et al. J. Med. Chem. 2008, 51:3804-3813.
20. Scheuermann T.H., Li Q., Ma H.-W., Key J., Zhang L., Chen R., et al. Nat. Chem. Biol. 2013, 9:271-276.
21. Keller S., Vargas C., Zhao H., Piszczek G., Brautigam C.A., Schuck P. Anal. Chem. 2012, 84:5066-5073.
22. Machius M., Brautigam C.A., Tomchick D.R., Ward P., Otwinowski Z., Blevins J.S., et al. J. Mol. Biol. 2007, 373:681-694.
23. Tso S.-C., Qi X., Gui W.-J., Wu C.-Y., Chuang J.L., Wernstedt-Asterholm I., et al. J. Biol. Chem. 2014, 289:4432-4443.
24. Sambrook J., Fritsch E.F., Maniatis T. Molecular Cloning: A Laboratory Manual 1989, Cold Spring Harbor Publications, Cold Spring Harbor, NY. second ed.
25. Bösterling B., Quast U. Biochim. Biophys. Acta 1981, 657:58-72.
26. Brautigam, C.A., 2015. Methods 76 (2015) 87-98.
27. Bevington P.R., Robinson D.K. Data Reduction and Error Analysis for the Physical Sciences 1992, WCB/McGraw-Hill, Boston, MA. second ed.