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Volumn 6, Issue , 2015, Pages

Camera-based three-dimensional real-time particle tracking at kHz rates and Ångström accuracy

Author keywords

[No Author keywords available]

Indexed keywords

DATA PROCESSING; DETECTION METHOD; DNA; LASER; PARTICLE SIZE; REAL TIME; RESOLUTION;

EID: 84924616042     PISSN: None     EISSN: 20411723     Source Type: Journal    
DOI: 10.1038/ncomms6885     Document Type: Article
Times cited : (110)

References (38)
  • 1
    • 84879664794 scopus 로고    scopus 로고
    • Fork sensing and strand switching control antagonistic activities of RecQ helicases
    • Klaue, D. et al. Fork sensing and strand switching control antagonistic activities of RecQ helicases. Nat. Commun. 4, 2024 (2013).
    • (2013) Nat. Commun. , vol.4 , pp. 2024
    • Klaue, D.1
  • 2
    • 84870207299 scopus 로고    scopus 로고
    • Direct observation of stalled fork restart via fork regression in the T4 replication system
    • Manosas, M., Perumal, S. K., Croquette, V. & Benkovic, S. J. Direct observation of stalled fork restart via fork regression in the T4 replication system. Science 338, 1217-1220 (2012).
    • (2012) Science , vol.338 , pp. 1217-1220
    • Manosas, M.1    Perumal, S.K.2    Croquette, V.3    Benkovic, S.J.4
  • 3
    • 84871513032 scopus 로고    scopus 로고
    • Studying genomic processes at the single-molecule level: Introducing the tools and applications
    • Dulin, D., Lipfert, J., Moolman, M. C. & Dekker, N. H. Studying genomic processes at the single-molecule level: introducing the tools and applications. Nat. Rev. Genet. 14, 9-22 (2013).
    • (2013) Nat. Rev. Genet. , vol.14 , pp. 9-22
    • Dulin, D.1    Lipfert, J.2    Moolman, M.C.3    Dekker, N.H.4
  • 4
    • 33846898070 scopus 로고    scopus 로고
    • Single-molecule studies of nucleic acid motors
    • Seidel, R. & Dekker, C. Single-molecule studies of nucleic acid motors. Curr. Opin. Struct. Biol. 17, 80-86 (2007).
    • (2007) Curr. Opin. Struct. Biol. , vol.17 , pp. 80-86
    • Seidel, R.1    Dekker, C.2
  • 5
    • 33745774997 scopus 로고    scopus 로고
    • Direct force measurements on DNA in a solid-state nanopore
    • Keyser, U. F. et al. Direct force measurements on DNA in a solid-state nanopore. Nat. Phys. 2, 473-477 (2006).
    • (2006) Nat. Phys. , vol.2 , pp. 473-477
    • Keyser, U.F.1
  • 6
    • 80053923452 scopus 로고    scopus 로고
    • Resonances arising from hydrodynamic memory in Brownian motion
    • Franosch, T. et al. Resonances arising from hydrodynamic memory in Brownian motion. Nature 478, 85-88 (2011).
    • (2011) Nature , vol.478 , pp. 85-88
    • Franosch, T.1
  • 7
    • 0347623370 scopus 로고    scopus 로고
    • Kinesin moves by an asymmetric hand-over-hand mechanism
    • Asbury, C. L., Fehr, A. N. & Block, S. M. Kinesin moves by an asymmetric hand-over-hand mechanism. Science 302, 2130-2134 (2003).
    • (2003) Science , vol.302 , pp. 2130-2134
    • Asbury, C.L.1    Fehr, A.N.2    Block, S.M.3
  • 9
    • 84879040933 scopus 로고    scopus 로고
    • Sequence-dependent base pair stepping dynamics in XPD helicase unwinding
    • Qi, Z., Pugh, R. A., Spies, M. & Chemla, Y. R. Sequence-dependent base pair stepping dynamics in XPD helicase unwinding. Elife 2, e00334 (2013).
    • (2013) Elife , vol.2
    • Qi, Z.1    Pugh, R.A.2    Spies, M.3    Chemla, Y.R.4
  • 10
    • 79953292607 scopus 로고    scopus 로고
    • Ultrahigh-resolution optical trap with single-fluorophore sensitivity
    • Comstock, M. J., Ha, T. & Chemla, Y. R. Ultrahigh-resolution optical trap with single-fluorophore sensitivity. Nat. Methods 8, 335-340 (2011).
    • (2011) Nat. Methods , vol.8 , pp. 335-340
    • Comstock, M.J.1    Ha, T.2    Chemla, Y.R.3
  • 11
    • 70349216944 scopus 로고    scopus 로고
    • Optical tweezers with millikelvin precision of temperature-controlled objectives and base-pair resolution
    • Mahamdeh, M. & Schäffer, E. Optical tweezers with millikelvin precision of temperature-controlled objectives and base-pair resolution. Opt. Express 17, 17190-17199 (2009).
    • (2009) Opt. Express , vol.17 , pp. 17190-17199
    • Mahamdeh, M.1    Schäffer, E.2
  • 12
    • 0029977418 scopus 로고    scopus 로고
    • Methods of digital video microscopy for colloidal studies
    • Crocker, J. C. & Grier, D. G. Methods of digital video microscopy for colloidal studies. J. Colloid Interface Sci. 179, 298-310 (1996).
    • (1996) J. Colloid Interface Sci. , vol.179 , pp. 298-310
    • Crocker, J.C.1    Grier, D.G.2
  • 13
    • 0036111913 scopus 로고    scopus 로고
    • Magnetic tweezers: Micromanipulation and force measurement at the molecular level
    • Gosse, C. & Croquette, V. Magnetic tweezers: micromanipulation and force measurement at the molecular level. Biophys. J. 82, 3314-3329 (2002).
    • (2002) Biophys. J. , vol.82 , pp. 3314-3329
    • Gosse, C.1    Croquette, V.2
  • 14
    • 59149096327 scopus 로고    scopus 로고
    • Torsional stiffness of single superparamagnetic microspheres in an external magnetic field
    • Klaue, D. & Seidel, R. Torsional stiffness of single superparamagnetic microspheres in an external magnetic field. Phys. Rev. Lett. 102, 028302 (2009).
    • (2009) Phys. Rev. Lett. , vol.102
    • Klaue, D.1    Seidel, R.2
  • 15
    • 84861401482 scopus 로고    scopus 로고
    • Recent advances in magnetic tweezers
    • De Vlaminck, I. & Dekker, C. Recent advances in magnetic tweezers. Annu. Rev. Biophys. 41, 453-472 (2012).
    • (2012) Annu. Rev. Biophys. , vol.41 , pp. 453-472
    • De Vlaminck, I.1    Dekker, C.2
  • 16
    • 60549086229 scopus 로고    scopus 로고
    • Type III restriction enzymes communicate in 1D without looping between their target sites
    • Ramanathan, S. P. et al. Type III restriction enzymes communicate in 1D without looping between their target sites. Proc. Natl Acad. Sci. USA 106, 1748-1753 (2009).
    • (2009) Proc. Natl Acad. Sci. USA , vol.106 , pp. 1748-1753
    • Ramanathan, S.P.1
  • 17
    • 83655192461 scopus 로고    scopus 로고
    • Highly parallel magnetic tweezers by targeted DNA tethering
    • De Vlaminck, I. et al. Highly parallel magnetic tweezers by targeted DNA tethering. Nano Lett. 11, 5489-5493 (2011).
    • (2011) Nano Lett. , vol.11 , pp. 5489-5493
    • De Vlaminck, I.1
  • 18
    • 54749117023 scopus 로고    scopus 로고
    • Multiplexed single-molecule measurements with magnetic tweezers
    • Ribeck, N. & Saleh, O. A. Multiplexed single-molecule measurements with magnetic tweezers. Rev. Sci. Instrum. 79, 094301 (2008).
    • (2008) Rev. Sci. Instrum. , vol.79
    • Ribeck, N.1    Saleh, O.A.2
  • 19
    • 84870527086 scopus 로고    scopus 로고
    • A compact holographic optical tweezers instrument
    • Gibson, G. M. et al. A compact holographic optical tweezers instrument. Rev. Sci. Instrum. 83, 113107 (2012).
    • (2012) Rev. Sci. Instrum. , vol.83
    • Gibson, G.M.1
  • 20
    • 78149366169 scopus 로고    scopus 로고
    • Real-time particle tracking at 10,000 fps using optical fiber illumination
    • Otto, O. et al. Real-time particle tracking at 10,000 fps using optical fiber illumination. Opt. Express 18, 22722-22733 (2010).
    • (2010) Opt. Express , vol.18 , pp. 22722-22733
    • Otto, O.1
  • 21
    • 79954495299 scopus 로고    scopus 로고
    • High-speed video-based tracking of optically trapped colloids
    • Otto, O. et al. High-speed video-based tracking of optically trapped colloids. J. Opt. 13, 4 (2011).
    • (2011) J. Opt. , vol.13 , pp. 4
    • Otto, O.1
  • 23
    • 0037437363 scopus 로고    scopus 로고
    • Three-dimensional tracking of fluorescent nanoparticles with subnanometer precision by use of off-focus imaging
    • Speidel, M., Jonáš, A. & Florin, E. L. Three-dimensional tracking of fluorescent nanoparticles with subnanometer precision by use of off-focus imaging. Opt. Lett. 28, 69-71 (2003).
    • (2003) Opt. Lett. , vol.28 , pp. 69-71
    • Speidel, M.1    Jonáš, A.2    Florin, E.L.3
  • 24
    • 67749129301 scopus 로고    scopus 로고
    • Quantifying noise in optical tweezers by allan variance
    • Czerwinski, F., Richardson, A. C. & Oddershede, L. B. Quantifying noise in optical tweezers by allan variance. Opt. Express 17, 13255-13269 (2009).
    • (2009) Opt. Express , vol.17 , pp. 13255-13269
    • Czerwinski, F.1    Richardson, A.C.2    Oddershede, L.B.3
  • 25
    • 34547686108 scopus 로고    scopus 로고
    • Step length measurement-theory and simulation for tethered bead constant-force single molecule assay
    • Wallin, A. E., Salmi, A. & Tuma, R. Step length measurement-theory and simulation for tethered bead constant-force single molecule assay. Biophys. J. 93, 795-805 (2007).
    • (2007) Biophys. J. , vol.93 , pp. 795-805
    • Wallin, A.E.1    Salmi, A.2    Tuma, R.3
  • 26
    • 84857837586 scopus 로고    scopus 로고
    • Power spectrum and Allan variance methods for calibrating single-molecule video-tracking instruments
    • Lansdorp, B. M. & Saleh, O. A. Power spectrum and Allan variance methods for calibrating single-molecule video-tracking instruments. Rev. Sci. Instrum. 83, 025115 (2012).
    • (2012) Rev. Sci. Instrum. , vol.83
    • Lansdorp, B.M.1    Saleh, O.A.2
  • 28
    • 84861134836 scopus 로고    scopus 로고
    • Non-bias-limited tracking of spherical particles, enabling nanometer resolution at low magnification
    • van Loenhout, M. T. J., Kerssemakers, J. W. J., De Vlaminck, I. & Dekker, C. Non-bias-limited tracking of spherical particles, enabling nanometer resolution at low magnification. Biophys. J. 102, 2362-2371 (2012).
    • (2012) Biophys. J. , vol.102 , pp. 2362-2371
    • Van Loenhout, M.T.J.1    Kerssemakers, J.W.J.2    De Vlaminck, I.3    Dekker, C.4
  • 29
    • 58249114971 scopus 로고    scopus 로고
    • Dynamics of DNA replication loops reveal temporal control of lagging-strand synthesis
    • Hamdan, S. M., Loparo, J. J., Takahashi, M., Richardson, C. C. & van Oijen, A. M. Dynamics of DNA replication loops reveal temporal control of lagging-strand synthesis. Nature 457, 336-339 (2009).
    • (2009) Nature , vol.457 , pp. 336-339
    • Hamdan, S.M.1    Loparo, J.J.2    Takahashi, M.3    Richardson, C.C.4    Van Oijen, A.M.5
  • 30
    • 84880924506 scopus 로고    scopus 로고
    • High-speed micro particle image velocimetry studies of boundary-layer flows in a direct-injection engine
    • Jainski, C., Lu, L., Dreizler, A. & Sick, V. High-speed micro particle image velocimetry studies of boundary-layer flows in a direct-injection engine. Int. J. Engine Res. 14, 247-259 (2013).
    • (2013) Int. J. Engine Res. , vol.14 , pp. 247-259
    • Jainski, C.1    Lu, L.2    Dreizler, A.3    Sick, V.4
  • 31
    • 84859198102 scopus 로고    scopus 로고
    • Single-molecule mechanical identification and sequencing
    • Ding, F. et al. Single-molecule mechanical identification and sequencing. Nat. Methods 9, 367-372 (2012).
    • (2012) Nat. Methods , vol.9 , pp. 367-372
    • Ding, F.1
  • 32
    • 83655192457 scopus 로고    scopus 로고
    • Direct mechanical measurements reveal the material properties of three-dimensional DNA origami
    • Kauert, D. J., Kurth, T., Liedl, T. & Seidel, R. Direct mechanical measurements reveal the material properties of three-dimensional DNA origami. Nano Lett. 11, 5558-5563 (2011).
    • (2011) Nano Lett. , vol.11 , pp. 5558-5563
    • Kauert, D.J.1    Kurth, T.2    Liedl, T.3    Seidel, R.4
  • 33
    • 84863856881 scopus 로고    scopus 로고
    • Electromagnetic torque tweezers: A versatile approach for measurement of single-molecule twist and torque
    • Janssen, X. J. A. et al. Electromagnetic torque tweezers: a versatile approach for measurement of single-molecule twist and torque. Nano Lett. 12, 3634-3639 (2012).
    • (2012) Nano Lett. , vol.12 , pp. 3634-3639
    • Janssen, X.J.A.1
  • 34
    • 84855795765 scopus 로고    scopus 로고
    • Scanning evanescent fields using a pointlike light source and a nanomechanical DNA gear
    • Brutzer, H., Schwarz, F. W. & Seidel, R. Scanning evanescent fields using a pointlike light source and a nanomechanical DNA gear. Nano Lett. 12, 473-478 (2012).
    • (2012) Nano Lett. , vol.12 , pp. 473-478
    • Brutzer, H.1    Schwarz, F.W.2    Seidel, R.3
  • 35
    • 84860012641 scopus 로고    scopus 로고
    • Torque measurements reveal sequence-specific cooperative transitions in supercoiled DNA
    • Oberstrass, F. C., Fernandes, L. E. & Bryant, Z. Torque measurements reveal sequence-specific cooperative transitions in supercoiled DNA. Proc. Natl Acad. Sci. USA 109, 6106-6111 (2012).
    • (2012) Proc. Natl Acad. Sci. USA , vol.109 , pp. 6106-6111
    • Oberstrass, F.C.1    Fernandes, L.E.2    Bryant, Z.3
  • 36
    • 84876346296 scopus 로고    scopus 로고
    • The helicase-like domains of type III restriction enzymes trigger long-range diffusion along DNA
    • Schwarz, F. W. et al. The helicase-like domains of type III restriction enzymes trigger long-range diffusion along DNA. Science 340, 353-356 (2013).
    • (2013) Science , vol.340 , pp. 353-356
    • Schwarz, F.W.1
  • 37
    • 77950659882 scopus 로고    scopus 로고
    • Energetics at the DNA supercoiling transition
    • Brutzer, H., Luzzietti, N., Klaue, D. & Seidel, R. Energetics at the DNA supercoiling transition. Biophys. J. 98, 1267-1276 (2010).
    • (2010) Biophys. J. , vol.98 , pp. 1267-1276
    • Brutzer, H.1    Luzzietti, N.2    Klaue, D.3    Seidel, R.4
  • 38
    • 0028370233 scopus 로고
    • Characterizing frequency stability: A continuous power-law model with discrete sampling
    • Walter, T. Characterizing frequency stability: a continuous power-law model with discrete sampling. IEEE Trans. Instrum. Meas. 43, 69-79 (1994).
    • (1994) IEEE Trans. Instrum. Meas. , vol.43 , pp. 69-79
    • Walter, T.1


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