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Volumn 8, Issue 4, 2011, Pages 335-340

Ultrahigh-resolution optical trap with single-fluorophore sensitivity

Author keywords

[No Author keywords available]

Indexed keywords

CARRIER PROTEIN; COMPLEMENTARY DNA; DNA BINDING PROTEIN; OLIGONUCLEOTIDE;

EID: 79953292607     PISSN: 15487091     EISSN: 15491676     Source Type: Journal    
DOI: 10.1038/nmeth.1574     Document Type: Article
Times cited : (169)

References (36)
  • 1
    • 85015087906 scopus 로고    scopus 로고
    • Ten years of tension: Single-molecule DNA mechanics
    • DOI 10.1038/nature01405
    • Bustamante, C., Bryant, Z. & Smith, S.B. Ten years of tension: single-molecule DNA mechanics. Nature 421, 423-427 (2003) (Pubitemid 36157948)
    • (2003) Nature , vol.421 , Issue.6921 , pp. 423-427
    • Bustamante, C.1    Bryant, Z.2    Smith, S.B.3
  • 2
    • 3342942688 scopus 로고    scopus 로고
    • Single-molecule fluorescence spectroscopy and microscopy of biomolecular motors
    • Peterman, E.J., Sosa, H. & Moerner, W.E. Single-molecule fluorescence spectroscopy and microscopy of biomolecular motors. Annu. Rev. Phys. Chem. 55, 79-96 (2004).
    • (2004) Annu. Rev. Phys. Chem. , vol.55 , pp. 79-96
    • Peterman, E.J.1    Sosa, H.2    Moerner, W.E.3
  • 3
    • 33645990641 scopus 로고    scopus 로고
    • Bridging conformational dynamics and function using single-molecule spectroscopy
    • Myong, S., Stevens, B.C. & Ha, T. Bridging conformational dynamics and function using single-molecule spectroscopy. Structure 14, 633-643 (2006)
    • (2006) Structure , vol.14 , pp. 633-643
    • Myong, S.1    Stevens, B.C.2    Ha, T.3
  • 6
    • 33748926752 scopus 로고    scopus 로고
    • Stoichiometry and turnover in single, functioning membrane protein complexes
    • DOI 10.1038/nature05135, PII NATURE05135
    • Leake, M.C. et al. Stoichiometry and turnover in single, functioning membrane protein complexes. Nature 443, 355-358 (2006) (Pubitemid 44435156)
    • (2006) Nature , vol.443 , Issue.7109 , pp. 355-358
    • Leake, M.C.1    Chandler, J.H.2    Wadhams, G.H.3    Bai, F.4    Berry, R.M.5    Armitage, J.P.6
  • 7
    • 34247843089 scopus 로고    scopus 로고
    • Subunit counting in membrane-bound proteins
    • DOI 10.1038/nmeth1024, PII NMETH1024
    • Ulbrich, M.H. & Isacoff, E.Y. Subunit counting in membrane-bound proteins. Nat. Methods 4, 319-321 (2007) (Pubitemid 46766975)
    • (2007) Nature Methods , vol.4 , Issue.4 , pp. 319-321
    • Ulbrich, M.H.1    Isacoff, E.Y.2
  • 8
    • 0037832404 scopus 로고    scopus 로고
    • Myosin V walks hand-over-hand: Single fluorophore imaging with 1.5-nm localization
    • DOI 10.1126/science.1084398
    • Yildiz, A. et al. Myosin v walks hand-over-hand: Single fluorophore imaging with 1.5-nm localization. Science 300, 2061-2065 (2003) (Pubitemid 36760126)
    • (2003) Science , vol.300 , Issue.5628 , pp. 2061-2065
    • Yildiz, A.1    Forkey, J.N.2    McKinney, S.A.3    Ha, T.4    Goldman, Y.E.5    Selvin, P.R.6
  • 10
    • 44449134820 scopus 로고    scopus 로고
    • A practical guide to single-molecule FRET
    • DOI 10.1038/nmeth.1208, PII NMETH.1208
    • Roy, R., Hohng, S. & Ha, T. A practical guide to single-molecule fret. Nat. Methods 5, 507-516 (2008) (Pubitemid 351761757)
    • (2008) Nature Methods , vol.5 , Issue.6 , pp. 507-516
    • Roy, R.1    Hohng, S.2    Ha, T.3
  • 11
    • 27644514163 scopus 로고    scopus 로고
    • Repetitive shuttling of a motor protein on DNA
    • DOI 10.1038/nature04049, PII N04049
    • Myong, S., Rasnik, I., Joo, C., Lohman, T.M. & Ha, T. Repetitive shuttling of a motor protein on DNA. Nature 437, 1321-1325 (2005) (Pubitemid 41568672)
    • (2005) Nature , vol.437 , Issue.7063 , pp. 1321-1325
    • Myong, S.1    Rasnik, I.2    Joo, C.3    Lohman, T.M.4    Ha, T.5
  • 12
    • 28544432440 scopus 로고    scopus 로고
    • Direct observation of base-pair stepping by RNA polymerase
    • DOI 10.1038/nature04268, PII N04268
    • Abbondanzieri, E.A., Greenleaf, W.J., Shaevitz, J.W., Landick, R. & Block, S.M. Direct observation of base-pair stepping by RNA polymerase. Nature 438, 460-465 (2005) (Pubitemid 41742012)
    • (2005) Nature , vol.438 , Issue.7067 , pp. 460-465
    • Abbondanzieri, E.A.1    Greenleaf, W.J.2    Shaevitz, J.W.3    Landick, R.4    Block, S.M.5
  • 14
    • 67649322129 scopus 로고    scopus 로고
    • Precision surface-coupled optical-trapping assay with one-basepair resolution
    • Carter, A.R., Seol, Y. & Perkins, T.T. Precision surface-coupled optical-trapping assay with one-basepair resolution. Biophys. J. 96, 2926-2934 (2009)
    • (2009) Biophys. J. , vol.96 , pp. 2926-2934
    • Carter, A.R.1    Seol, Y.2    Perkins, T.T.3
  • 15
    • 77949498593 scopus 로고    scopus 로고
    • Revealing the base pair stepping dynamics of nucleic acid motor proteins with optical traps
    • Chemla, Y.R. Revealing the base pair stepping dynamics of nucleic acid motor proteins with optical traps. Phys. Chem. Chem. Phys. 12, 3080-3095 (2010)
    • (2010) Phys. Chem. Chem. Phys. , vol.12 , pp. 3080-3095
    • Chemla, Y.R.1
  • 16
    • 0346258014 scopus 로고    scopus 로고
    • Backtracking by single RNA polymerase molecules observed at near-base-pair resolution
    • DOI 10.1038/nature02191
    • Shaevitz, J.W., Abbondanzieri, E.A., Landick, R. & Block, S.M. Backtracking by single rna polymerase molecules observed at near-base-pair resolution. Nature 426, 684-687 (2003) (Pubitemid 38009379)
    • (2003) Nature , vol.426 , Issue.6967 , pp. 684-687
    • Shaevitz, J.W.1    Abbondanzieri, E.A.2    Landick, R.3    Block, S.M.4
  • 18
    • 58749087869 scopus 로고    scopus 로고
    • Intersubunit coordination in a homomeric ring atpase
    • Moffitt, J.R. et al. Intersubunit coordination in a homomeric ring atpase. Nature 457, 446-450 (2009)
    • (2009) Nature , vol.457 , pp. 446-450
    • Moffitt, J.R.1
  • 19
    • 0028766419 scopus 로고
    • Relaxation of a single DNA molecule observed by optical microscopy
    • Perkins, T.T., Quake, S.R., Smith, D.E. & Chu, S. Relaxation of a single DNA molecule observed by optical microscopy. Science 264, 822-826 (1994) (Pubitemid 24193447)
    • (1994) Science , vol.264 , Issue.5160 , pp. 822-826
    • Perkins, T.T.1    Quake, S.R.2    Smith, D.E.3    Chu, S.4
  • 20
    • 0032559298 scopus 로고    scopus 로고
    • Simultaneous observation of individual ATPase and mechanical events by a single myosin molecule during interaction with actin
    • DOI 10.1016/S0092-8674(00)80911-3
    • Ishijima, A. et al. Simultaneous observation of individual atpase and mechanical events by a single myosin molecule during interaction with actin. Cell 92, 161-171 (1998) (Pubitemid 28073040)
    • (1998) Cell , vol.92 , Issue.2 , pp. 161-171
    • Ishijima, A.1    Kojima, H.2    Funatsu, T.3    Tokunaga, M.4    Higuchi, H.5    Tanaka, H.6    Yanagida, T.7
  • 21
    • 35348897239 scopus 로고    scopus 로고
    • Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction
    • DOI 10.1126/science.1146113
    • Hohng, S. et al. Fluorescence-force spectroscopy maps two-dimensional reaction landscape of the holliday junction. Science 318, 279-283 (2007) (Pubitemid 47574856)
    • (2007) Science , vol.318 , Issue.5848 , pp. 279-283
    • Hohng, S.1    Zhou, R.2    Nahas, M.K.3    Yu, J.4    Schulten, K.5    Lilley, D.M.J.6    Ha, T.7
  • 23
    • 59649116344 scopus 로고    scopus 로고
    • Counting rad51 proteins disassembling from nucleoprotein filaments under tension
    • van Mameren, J. et al. Counting rad51 proteins disassembling from nucleoprotein filaments under tension. Nature 457, 745-748 (2009)
    • (2009) Nature , vol.457 , pp. 745-748
    • Van Mameren, J.1
  • 25
    • 2642522184 scopus 로고    scopus 로고
    • Combining optical trapping and single-molecule fluorescence spectroscopy: Enhanced photobleaching of fluorophores
    • van Dijk, M.A., Kapitein, L.C., Mameren, J., Schmidt, C.F. & Peterman, E.J. Combining optical trapping and single-molecule fluorescence spectroscopy: Enhanced photobleaching of fluorophores. J. Phys. Chem. B 108, 6479-6484 (2004)
    • (2004) J. Phys. Chem. B , vol.108 , pp. 6479-6484
    • Van Dijk, M.A.1    Kapitein, L.C.2    Mameren, J.3    Schmidt, C.F.4    Peterman, E.J.5
  • 26
    • 33746702015 scopus 로고    scopus 로고
    • Interlaced optical force-fluorescence measurements for single molecule biophysics
    • DOI 10.1529/biophysj.106.082602
    • Brau, R.R., Tarsa, P.B., Ferrer, J.M., Lee, P. & Lang, M.J. Interlaced optical force-fluorescence measurements for single molecule biophysics. Biophys. J. 91, 1069-1077 (2006) (Pubitemid 44161939)
    • (2006) Biophysical Journal , vol.91 , Issue.3 , pp. 1069-1077
    • Brau, R.R.1    Tarsa, P.B.2    Ferrer, J.M.3    Lee, P.4    Lang, M.J.5
  • 27
    • 52149114343 scopus 로고    scopus 로고
    • High resolution dual trap optical tweezers with differential detection
    • eds., Selvin, P. & Ha, T.J. Cold Spring Harbor Laboratory Press
    • Bustamante, C., Chemla, Y.R. & Moffitt, J.R. High resolution dual trap optical tweezers with differential detection. in Single-Molecule Techniques: A Laboratory Manual (eds., Selvin, P. & Ha, T.J.) 297-324 (Cold Spring Harbor Laboratory Press, 2007)
    • (2007) Single-Molecule Techniques: A Laboratory Manual , pp. 297-324
    • Bustamante, C.1    Chemla, Y.R.2    Moffitt, J.R.3
  • 29
    • 0027472356 scopus 로고
    • Micromanipulation by 'multiple' optical traps created by a single fast scanning trap integrated with the bilateral confocal scanning laser microscope
    • DOI 10.1002/cyto.990140202
    • Visscher, K., Brakenhoff, G.J. & Krol, J.J. Micromanipulation by multiple optical traps created by a single fast scanning trap integrated with the bilateral confocal scanning laser microscope. Cytometry 14, 105-114 (1993) (Pubitemid 23042733)
    • (1993) Cytometry , vol.14 , Issue.2 , pp. 105-114
    • Visscher, K.1    Brakenhoff, G.J.2    Krol, J.J.3
  • 31
    • 1842607083 scopus 로고    scopus 로고
    • Power spectrum analysis for optical tweezers
    • Berg-Sorensen, K. & Flyvbjerg, H. Power spectrum analysis for optical tweezers. Rev. Sci. Instrum. 75, 594-612 (2004)
    • (2004) Rev. Sci. Instrum. , vol.75 , pp. 594-612
    • Berg-Sorensen, K.1    Flyvbjerg, H.2
  • 32
    • 70449095193 scopus 로고    scopus 로고
    • Characterization of photoactivated singlet oxygen damage in single-molecule optical trap experiments
    • Landry, M.P., McCall, P.M., Qi, Z. & Chemla, Y.R. Characterization of photoactivated singlet oxygen damage in single-molecule optical trap experiments. Biophys. J. 97, 2128-2136 (2009)
    • (2009) Biophys. J. , vol.97 , pp. 2128-2136
    • Landry, M.P.1    McCall, P.M.2    Qi, Z.3    Chemla, Y.R.4
  • 33
    • 0034807927 scopus 로고    scopus 로고
    • Single-molecule fluorescence resonance energy transfer
    • DOI 10.1006/meth.2001.1217
    • Ha, T. Single-molecule fluorescence resonance energy transfer. Methods 25, 78-86 (2001) (Pubitemid 32905290)
    • (2001) Methods , vol.25 , Issue.1 , pp. 78-86
    • Ha, T.1
  • 34
    • 33750295496 scopus 로고    scopus 로고
    • Nonblinking and long-lasting single-molecule fluorescence imaging
    • DOI 10.1038/nmeth934, PII NMETH934
    • Rasnik, I., McKinney, S.A. & Ha, T. Nonblinking and long-lasting single-molecule fluorescence imaging. Nat. Methods 3, 891-893 (2006) (Pubitemid 44614723)
    • (2006) Nature Methods , vol.3 , Issue.11 , pp. 891-893
    • Rasnik, I.1    McKinney, S.A.2    Ha, T.3
  • 35
    • 0030024985 scopus 로고    scopus 로고
    • Overstretching B-DNA: The elastic response of individual double-stranded and single-stranded DNA molecules
    • Smith, S.B., Cui, Y. & Bustamante, C. Overstretching B-DNA: the elastic response of individual double-stranded and single-stranded DNA molecules. Science 271, 795-799 (1996)
    • (1996) Science , vol.271 , pp. 795-799
    • Smith, S.B.1    Cui, Y.2    Bustamante, C.3


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