메뉴 건너뛰기




Volumn 13, Issue 1, 2015, Pages

Microbiology of diabetic foot infections: From Louis Pasteur to 'crime scene investigation'

Author keywords

Diabetic foot infection; High throughput sequencing; Metagenomics; Microbiology; Molecular diagnostics

Indexed keywords

EXTENDED SPECTRUM BETA LACTAMASE; HEMOLYSIN; LEUKOCIDIN; STAPHYLOCOCCUS ENTEROTOXIN; STAPHYLOCOCCUS ENTEROTOXIN A; RNA 16S; VIRULENCE FACTOR;

EID: 84924338387     PISSN: None     EISSN: 17417015     Source Type: Journal    
DOI: 10.1186/s12916-014-0232-0     Document Type: Article
Times cited : (124)

References (64)
  • 1
    • 0004313259 scopus 로고
    • In Translation from the French by Mrs RL Devonshire
    • Vallery-Radot R: The Life of Pasteur, vol. II. In Translation from the French by Mrs RL Devonshire. 1902.
    • (1902) The Life of Pasteur , vol.2
    • Vallery-Radot, R.1
  • 3
    • 11844293372 scopus 로고    scopus 로고
    • Preventing foot ulcers in patients with diabetes
    • Singh N, Armstrong DG, Lipsky BA: Preventing foot ulcers in patients with diabetes. JAMA 2005, 293:217-228.
    • (2005) JAMA , vol.293 , pp. 217-228
    • Singh, N.1    Armstrong, D.G.2    Lipsky, B.A.3
  • 5
    • 33846905752 scopus 로고    scopus 로고
    • Validation of the Infectious Diseases Society of America's diabetic foot infection classification system
    • Lavery LA, Armstrong DG, Murdoch DP, Peters EJG, Lipsky BA: Validation of the Infectious Diseases Society of America's diabetic foot infection classification system. Clin Infect Dis 2007, 44:562-565.
    • (2007) Clin Infect Dis , vol.44 , pp. 562-565
    • Lavery, L.A.1    Armstrong, D.G.2    Murdoch, D.P.3    Peters, E.J.G.4    Lipsky, B.A.5
  • 6
    • 84924652825 scopus 로고    scopus 로고
    • Open bypass and endovascular procedures among diabetic foot ulcer cases in the United States from 2001 to 2010
    • Skrepnek GH, Armstrong DG, Mills JL: Open bypass and endovascular procedures among diabetic foot ulcer cases in the United States from 2001 to 2010. J Vasc Surg 2014. doi:10.1016/j.jvs.2014.04.071
    • (2014) J Vasc Surg
    • Skrepnek, G.H.1    Armstrong, D.G.2    Mills, J.L.3
  • 9
    • 47649085039 scopus 로고    scopus 로고
    • Wound bioburden and infection-related complications in diabetic foot ulcers
    • Gardner SE, Frantz RA: Wound bioburden and infection-related complications in diabetic foot ulcers. Biol Res Nurs 2008, 10:44-53.
    • (2008) Biol Res Nurs , vol.10 , pp. 44-53
    • Gardner, S.E.1    Frantz, R.A.2
  • 10
    • 84861510108 scopus 로고    scopus 로고
    • Infectious Diseases Society of America clinical practice guideline for the diagnosis and treatment of diabetic foot infections
    • Lipsky BA, Berendt AR, Cornia PB, Pile JC, Peters EJ, Armstrong DG, Deery HG, Embil JM, Joseph WS, Karchmer AW, Pinzur MS, Senneville E, Infectious Diseases Society of America: Infectious Diseases Society of America clinical practice guideline for the diagnosis and treatment of diabetic foot infections. Clin Infect Dis 2012, 2012:e132-e173.
    • (2012) Clin Infect Dis , vol.2012 , pp. e132-e173
  • 11
    • 34248225758 scopus 로고    scopus 로고
    • Cellular and molecular basis of wound healing in diabetes
    • Brem H, Tomic-Canic M: Cellular and molecular basis of wound healing in diabetes. J Clin Invest 2007, 117:1219-1222.
    • (2007) J Clin Invest , vol.117 , pp. 1219-1222
    • Brem, H.1    Tomic-Canic, M.2
  • 13
    • 18244416170 scopus 로고    scopus 로고
    • Defined and refined: criteria for identifying wound infection revisited
    • Cutting KF, White R: Defined and refined: criteria for identifying wound infection revisited. Br J Community Nurs 2004, 9:S6-S15.
    • (2004) Br J Community Nurs , vol.9 , pp. S6-S15
    • Cutting, K.F.1    White, R.2
  • 15
    • 15544376957 scopus 로고    scopus 로고
    • Criteria for identifying wound infection-revisited
    • Cutting KF, White RJ: Criteria for identifying wound infection-revisited. Ostomy Wound Manage 2005, 51:28-34.
    • (2005) Ostomy Wound Manage , vol.51 , pp. 28-34
    • Cutting, K.F.1    White, R.J.2
  • 16
    • 72749097447 scopus 로고    scopus 로고
    • Clinical signs of infection in diabetic foot ulcers with high microbial load
    • Gardner SE, Hillis SL, Frantz RA: Clinical signs of infection in diabetic foot ulcers with high microbial load. Biol Res Nurs 2009, 11:119-128.
    • (2009) Biol Res Nurs , vol.11 , pp. 119-128
    • Gardner, S.E.1    Hillis, S.L.2    Frantz, R.A.3
  • 19
    • 34548665257 scopus 로고    scopus 로고
    • Bacteriology of moderate-to-severe diabetic foot infections and in vitro activity of antimicrobial agents
    • Citron DM, Goldstein EJ, Merriam CV, Lipsky BA, Abramson MA: Bacteriology of moderate-to-severe diabetic foot infections and in vitro activity of antimicrobial agents. J Clin Microbiol 2007, 45:2819-2828.
    • (2007) J Clin Microbiol , vol.45 , pp. 2819-2828
    • Citron, D.M.1    Goldstein, E.J.2    Merriam, C.V.3    Lipsky, B.A.4    Abramson, M.A.5
  • 20
    • 84864075394 scopus 로고    scopus 로고
    • Diabetic foot infections: the role of microbiology and antibiotic treatment
    • Roberts AD, Simon GL: Diabetic foot infections: the role of microbiology and antibiotic treatment. Semin Vasc Surg 2012, 25:75-81.
    • (2012) Semin Vasc Surg , vol.25 , pp. 75-81
    • Roberts, A.D.1    Simon, G.L.2
  • 22
    • 3943054082 scopus 로고    scopus 로고
    • It's not what you put on, but what you take off: techniques for debriding and off-loading the diabetic foot wound
    • Armstrong DG, Lavery LA, Nixon BP, Boulton AJ: It's not what you put on, but what you take off: techniques for debriding and off-loading the diabetic foot wound. Clin Infect Dis 2004, 39:S92-S99.
    • (2004) Clin Infect Dis , vol.39 , pp. S92-S99
    • Armstrong, D.G.1    Lavery, L.A.2    Nixon, B.P.3    Boulton, A.J.4
  • 23
    • 84926677946 scopus 로고    scopus 로고
    • New molecular techniques to study the skin microbiota of diabetic foot ulcers
    • Lavigne JP, Sotto A, Dunyach-Remy C, Lipsky BA: New molecular techniques to study the skin microbiota of diabetic foot ulcers. Adv Wound Care 2014. doi:10.1089/wound.2014.0532.
    • (2014) Adv Wound Care
    • Lavigne, J.P.1    Sotto, A.2    Dunyach-Remy, C.3    Lipsky, B.A.4
  • 25
    • 53749097505 scopus 로고    scopus 로고
    • Polymicrobial nature of chronic diabetic foot ulcer biofilm infections determined using bacterial tag encoded FLX amplicon pyrosequencing (bTEFAP)
    • Dowd SE, Wolcott RD, Sun Y, McKeehan T, Smith E, Rhoads D: Polymicrobial nature of chronic diabetic foot ulcer biofilm infections determined using bacterial tag encoded FLX amplicon pyrosequencing (bTEFAP). PLoS One 2008, 3:e3326.
    • (2008) PLoS One , vol.3
    • Dowd, S.E.1    Wolcott, R.D.2    Sun, Y.3    McKeehan, T.4    Smith, E.5    Rhoads, D.6
  • 26
    • 34547697713 scopus 로고    scopus 로고
    • Diabetic foot infections: microbiology made modern? Array of hope
    • Lipsky BA: Diabetic foot infections: microbiology made modern? Array of hope. Diabetes Care 2007, 30:2171-2172.
    • (2007) Diabetes Care , vol.30 , pp. 2171-2172
    • Lipsky, B.A.1
  • 27
    • 34547658009 scopus 로고    scopus 로고
    • Miniaturized oligonucleotide arrays: a new tool for discriminating colonization from infection due to Staphylococcus aureus in diabetic foot ulcers
    • Sotto A, Richard JL, Jourdan N, Combescure C, Bouziges N, Lavigne JP, Nîmes University Hospital Working Group on the Diabetic Foot (GP30): Miniaturized oligonucleotide arrays: a new tool for discriminating colonization from infection due to Staphylococcus aureus in diabetic foot ulcers. Diabetes Care 2007, 30:2051-2056.
    • (2007) Diabetes Care , vol.30 , pp. 2051-2056
  • 29
    • 84859017612 scopus 로고    scopus 로고
    • Distinguishing colonization from infection with Staphylococcus aureus in diabetic foot ulcers with miniaturized oligonucleotide arrays: a French multicenter study
    • Sotto A, Richard JL, Messad N, Molinari N, Jourdan N, Schuldiner S, Sultan A, Carrière C, Canivet B, Landraud L, Lina G, Lavigne JP, the French Study Group on the Diabetic Foot: Distinguishing colonization from infection with Staphylococcus aureus in diabetic foot ulcers with miniaturized oligonucleotide arrays: a French multicenter study. Diabetes Care 2012, 35:617-623.
    • (2012) Diabetes Care , vol.35 , pp. 617-623
  • 30
    • 84874407312 scopus 로고    scopus 로고
    • Diabetic foot ulcer microbiome: one small step for molecular microbiology. One giant leap for understanding diabetic foot ulcers?
    • Lipsky BA, Richard JL, Lavigne JP: Diabetic foot ulcer microbiome: one small step for molecular microbiology. One giant leap for understanding diabetic foot ulcers? Diabetes 2013, 62:679-681.
    • (2013) Diabetes , vol.62 , pp. 679-681
    • Lipsky, B.A.1    Richard, J.L.2    Lavigne, J.P.3
  • 31
    • 27744552117 scopus 로고    scopus 로고
    • Ertapenem versus piperacillin/tazobactam for diabetic foot infections (SIDESTEP): prospective, randomised, controlled, double-blinded, multicentre trial
    • Lipsky BA, Armstrong DG, Citron DM, Tice AD, Morgenstern DE, Abramson MA: Ertapenem versus piperacillin/tazobactam for diabetic foot infections (SIDESTEP): prospective, randomised, controlled, double-blinded, multicentre trial. Lancet 2005, 366:1695-1703.
    • (2005) Lancet , vol.366 , pp. 1695-1703
    • Lipsky, B.A.1    Armstrong, D.G.2    Citron, D.M.3    Tice, A.D.4    Morgenstern, D.E.5    Abramson, M.A.6
  • 34
    • 84874444175 scopus 로고    scopus 로고
    • The neuropathic diabetic foot ulcer microbiome is associated with clinical factors
    • Gardner SE, Hillis SL, Heilmann K, Segre JA, Grice EA: The neuropathic diabetic foot ulcer microbiome is associated with clinical factors. Diabetes 2013, 62:923-930.
    • (2013) Diabetes , vol.62 , pp. 923-930
    • Gardner, S.E.1    Hillis, S.L.2    Heilmann, K.3    Segre, J.A.4    Grice, E.A.5
  • 37
    • 33645566184 scopus 로고    scopus 로고
    • Diabetic foot infections: stepwise medical and surgical management
    • Armstrong DG, Lipsky BA: Diabetic foot infections: stepwise medical and surgical management. Int Wound J 2004, 1:123-132.
    • (2004) Int Wound J , vol.1 , pp. 123-132
    • Armstrong, D.G.1    Lipsky, B.A.2
  • 38
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz P, Goebel BM, Pace NR: Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J Bacteriol 1998, 180:4765-4773. A published erratum appears in J Bacteriol 1998, 180:6793.
    • (1998) J Bacteriol , vol.180 , pp. 4765-4773
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 39
    • 46449124442 scopus 로고    scopus 로고
    • A diversity profile of the human skin microbiota
    • Grice EA, Kong HH, Renaud G, Young AC, NISC Comparative Sequencing Program, Bouffard GG, Blakesley RW, Wolfsberg TG, Turner ML, Segre JA: A diversity profile of the human skin microbiota. Genome Res 2008, 18:1043-1050.
    • (2008) Genome Res , vol.18 , pp. 1043-1050
  • 40
    • 42049111815 scopus 로고    scopus 로고
    • Survey of bacterial diversity in chronic wounds using pyrosequencing, DGGE, and full ribosome shotgun sequencing
    • Dowd SE, Sun Y, Secor PR, Rhoads DD, Wolcott BM, James GA, Wolcott RD: Survey of bacterial diversity in chronic wounds using pyrosequencing, DGGE, and full ribosome shotgun sequencing. BMC Microbiol 2008, 8:43.
    • (2008) BMC Microbiol , vol.8 , pp. 43
    • Dowd, S.E.1    Sun, Y.2    Secor, P.R.3    Rhoads, D.D.4    Wolcott, B.M.5    James, G.A.6    Wolcott, R.D.7
  • 41
    • 44949162188 scopus 로고    scopus 로고
    • New developments in diagnosing and treating diabetic foot infections
    • Lipsky BA: New developments in diagnosing and treating diabetic foot infections. Diabetes Metab Res Rev 2008, 24:S66-S71.
    • (2008) Diabetes Metab Res Rev , vol.24 , pp. S66-S71
    • Lipsky, B.A.1
  • 42
    • 0032192790 scopus 로고    scopus 로고
    • Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products
    • Handelsman J, Rondon MR, Brady SF, Clardy J, Goodman RM: Molecular biological access to the chemistry of unknown soil microbes: a new frontier for natural products. Chem Biol 1998, 5:R245-R249.
    • (1998) Chem Biol , vol.5 , pp. R245-R249
    • Handelsman, J.1    Rondon, M.R.2    Brady, S.F.3    Clardy, J.4    Goodman, R.M.5
  • 43
    • 0002842298 scopus 로고
    • The analysis of natural microbial-populations by ribosomal-RNA sequences
    • Pace NR, Stahl DA, Lane DJ, Olsen GJ: The analysis of natural microbial-populations by ribosomal-RNA sequences. Adv Microb Ecol 1986, 9:1-55.
    • (1986) Adv Microb Ecol , vol.9 , pp. 1-55
    • Pace, N.R.1    Stahl, D.A.2    Lane, D.J.3    Olsen, G.J.4
  • 46
    • 84862276328 scopus 로고    scopus 로고
    • Structure, function and diversity of the healthy human microbiome
    • Human Microbiome Project Consortium: Structure, function and diversity of the healthy human microbiome. Nature 2012, 486:207-214.
    • (2012) Nature , vol.486 , pp. 207-214
  • 47
    • 84924321771 scopus 로고    scopus 로고
    • 454 Life Sciences, a Roche Company
    • 454 Life Sciences, a Roche Company. [http://www.454.com]
  • 48
    • 84924321770 scopus 로고    scopus 로고
    • llumina |Sequencing and array-based solutions for genetic research
    • llumina |Sequencing and array-based solutions for genetic research. [http://www.illumina.com]
  • 49
    • 84924321769 scopus 로고    scopus 로고
    • Ion Torrent. [http://tools.lifetechnologies.com/content/sfs/brochures/Small_Genome_Brochure.pdf]
  • 50
    • 84871409631 scopus 로고    scopus 로고
    • Metagenomics and community profiling: culture-independent techniques in the clinical laboratory
    • Willner D, Hugenholtz P: Metagenomics and community profiling: culture-independent techniques in the clinical laboratory. Clin Microbiol Newsl 2013, 35:1-9.
    • (2013) Clin Microbiol Newsl , vol.35 , pp. 1-9
    • Willner, D.1    Hugenholtz, P.2
  • 51
    • 33750344695 scopus 로고    scopus 로고
    • 16S rRNA sequencing in routine bacterial identification: a 30-month experiment
    • Mignard S, Flandrois JP: 16S rRNA sequencing in routine bacterial identification: a 30-month experiment. J Microbiol Methods 2006, 67:574-581.
    • (2006) J Microbiol Methods , vol.67 , pp. 574-581
    • Mignard, S.1    Flandrois, J.P.2
  • 52
    • 84858864215 scopus 로고    scopus 로고
    • Molecular methods for pathogen and microbial community detection and characterization: current and potential application in diagnostic microbiology
    • Sibley CD, Peirano G, Church DL: Molecular methods for pathogen and microbial community detection and characterization: current and potential application in diagnostic microbiology. Infect Genet Evol 2012, 12:505-521.
    • (2012) Infect Genet Evol , vol.12 , pp. 505-521
    • Sibley, C.D.1    Peirano, G.2    Church, D.L.3
  • 53
    • 10944226351 scopus 로고    scopus 로고
    • Metagenomics: genomic analysis of microbial communities
    • Riesenfeld CS, Schloss PD, Handelsman J: Metagenomics: genomic analysis of microbial communities. Annu Rev Genet 2004, 38:525-552.
    • (2004) Annu Rev Genet , vol.38 , pp. 525-552
    • Riesenfeld, C.S.1    Schloss, P.D.2    Handelsman, J.3
  • 56
    • 0345195995 scopus 로고    scopus 로고
    • Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis
    • Wintzingerode F, Göbel U: Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol Rev 1997, 21:213-229.
    • (1997) FEMS Microbiol Rev , vol.21 , pp. 213-229
    • Wintzingerode, F.1    Göbel, U.2
  • 57
    • 0035988627 scopus 로고    scopus 로고
    • Quantification using real-time PCR technology: applications and limitations
    • Klein D: Quantification using real-time PCR technology: applications and limitations. Trends Mol Med 2002, 8:257-260.
    • (2002) Trends Mol Med , vol.8 , pp. 257-260
    • Klein, D.1
  • 58
    • 2542460200 scopus 로고    scopus 로고
    • PCR-based diagnostics for infectious diseases: uses, limitations, and future applications in acute-care settings
    • Yang S, Rothman RE: PCR-based diagnostics for infectious diseases: uses, limitations, and future applications in acute-care settings. Lancet Infect Dis 2004, 4:337-348.
    • (2004) Lancet Infect Dis , vol.4 , pp. 337-348
    • Yang, S.1    Rothman, R.E.2
  • 59
    • 73349110099 scopus 로고    scopus 로고
    • Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates
    • Kunin V, Engelbrektson A, Ochman H, Hugenholtz P: Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates. Environ Microbiol 2010, 12:118-123.
    • (2010) Environ Microbiol , vol.12 , pp. 118-123
    • Kunin, V.1    Engelbrektson, A.2    Ochman, H.3    Hugenholtz, P.4
  • 61
    • 84858955694 scopus 로고    scopus 로고
    • Comparison of culture and molecular identification of bacteria in chronic wounds
    • Rhoads DD, Wolcott RD, Sun Y, Dowd SE: Comparison of culture and molecular identification of bacteria in chronic wounds. Int J Mol Sci 2012, 13:2535-2550.
    • (2012) Int J Mol Sci , vol.13 , pp. 2535-2550
    • Rhoads, D.D.1    Wolcott, R.D.2    Sun, Y.3    Dowd, S.E.4
  • 63
    • 84894122170 scopus 로고    scopus 로고
    • Better tests, better care: improved diagnostics for infectious diseases
    • Caliendo AM, Gilbert DN, Ginocchio CC, Hanson KE, May L, Quinn TC, Tenover FC, Alland D, Blaschke AJ, Bonomo RA, Carroll KC, Ferraro MJ, Hirschhorn LR, Joseph WP, Karchmer T, MacIntyre AT, Reller LB, Jackson AF, Infectious Diseases Society of America (IDSA): Better tests, better care: improved diagnostics for infectious diseases. Clin Infect Dis 2013, 57:S139-S170.
    • (2013) Clin Infect Dis , vol.57 , pp. S139-S170
  • 64
    • 84924321768 scopus 로고    scopus 로고
    • "CSI: Crime Scene Investigation" Pilot (TV Episode 2000)
    • "CSI: Crime Scene Investigation" Pilot (TV Episode 2000). [http://www.imdb.com/title/tt0534724/quotes]


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.