-
1
-
-
84876370249
-
A critical look at reciprocity in ecology and evolution: Introduction to the symposium
-
Reznick, D. N. A critical look at reciprocity in ecology and evolution: introduction to the symposium. Am. Nat. 181, S1-S8 (2013).
-
(2013)
Am. Nat.
, vol.181
, pp. S1-S8
-
-
Reznick, D.N.1
-
2
-
-
84866682695
-
-
The University of Chicago Press
-
Thompson, J. N. in Relentless Evolution 121-143 (The University of Chicago Press, 2013).
-
(2013)
Relentless Evolution
, pp. 121-143
-
-
Thompson, J.N.1
-
3
-
-
34249070435
-
Evolution on ecological time-scales
-
Carroll, S. P., Hendry, A. P., Reznick, D. N. & Fox, C. W. Evolution on ecological time-scales. Funct. Ecol. 21, 387-393 (2007).
-
(2007)
Funct. Ecol.
, vol.21
, pp. 387-393
-
-
Carroll, S.P.1
Hendry, A.P.2
Reznick, D.N.3
Fox, C.W.4
-
4
-
-
0003732734
-
-
Garland Science
-
Janeway, C., Travers, P., Walport, M. & Shlomchik, M. Immunobiology: the Immune System in Health and Disease (Garland Science, 2005).
-
(2005)
Immunobiology: The Immune System in Health and Disease
-
-
Janeway, C.1
Travers, P.2
Walport, M.3
Shlomchik, M.4
-
5
-
-
34548083732
-
Neutral versus adaptive genetic variation in parasite resistance: Importance of major histocompatibility complex supertypes in a free-ranging primate
-
Schwensow, N., Fietz, J., Dausmann, K. H. & Sommer, S. Neutral versus adaptive genetic variation in parasite resistance: importance of major histocompatibility complex supertypes in a free-ranging primate. Heredity 99, 265-277 (2007).
-
(2007)
Heredity
, vol.99
, pp. 265-277
-
-
Schwensow, N.1
Fietz, J.2
Dausmann, K.H.3
Sommer, S.4
-
6
-
-
78751649582
-
MHC class II DRB diversity in raccoons (Procyon lotor) reveals associations with raccoon rabies virus (Lyssavirus)
-
Srithayakumar, V., Castillo, S., Rosatte, R. C. & Kyle, C. J. MHC class II DRB diversity in raccoons (Procyon lotor) reveals associations with raccoon rabies virus (Lyssavirus). Immunogenetics 63, 103-113 (2011).
-
(2011)
Immunogenetics
, vol.63
, pp. 103-113
-
-
Srithayakumar, V.1
Castillo, S.2
Rosatte, R.C.3
Kyle, C.J.4
-
7
-
-
84857566948
-
Insights into the complex associations between MHC class II DRB polymorphism and multiple gastrointestinal parasite infestations in the striped mouse
-
Froeschke, G. & Sommer, S. Insights into the complex associations between MHC class II DRB polymorphism and multiple gastrointestinal parasite infestations in the striped mouse. PLoS ONE 7, e31820 (2012).
-
(2012)
PLoS ONE
, vol.7
-
-
Froeschke, G.1
Sommer, S.2
-
8
-
-
27744606052
-
The importance of immune gene variability (MHC) in evolutionary ecology and conservation
-
Sommer, S. The importance of immune gene variability (MHC) in evolutionary ecology and conservation. Front. Zool. 2, 16 (2005).
-
(2005)
Front. Zool.
, vol.2
, pp. 16
-
-
Sommer, S.1
-
9
-
-
77950816077
-
How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings
-
Spurgin, L. G. & Richardson, D. S. How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings. Proc. R. Soc. London B Biol. Sci. 277, 979-988 (2010).
-
(2010)
Proc. R. Soc. London B Biol. Sci.
, vol.277
, pp. 979-988
-
-
Spurgin, L.G.1
Richardson, D.S.2
-
10
-
-
0037371150
-
Multiple parasites are driving major histocompatibility complex polymorphism in the wild
-
Wegner, K. M., Reusch, T. B. H. & Kalbe, M. Multiple parasites are driving major histocompatibility complex polymorphism in the wild. J. Evol. Biol. 16, 224-232 (2003).
-
(2003)
J. Evol. Biol.
, vol.16
, pp. 224-232
-
-
Wegner, K.M.1
Reusch, T.B.H.2
Kalbe, M.3
-
11
-
-
78650250240
-
Parasite-mediated evolution of the functional part of the MHC in primates
-
Garamszegi, L. Z. & Nunn, C. L. Parasite-mediated evolution of the functional part of the MHC in primates. J. Evol. Biol. 24, 184-195 (2011).
-
(2011)
J. Evol. Biol.
, vol.24
, pp. 184-195
-
-
Garamszegi, L.Z.1
Nunn, C.L.2
-
12
-
-
45149108270
-
Coevolutionary relationship between helminth diversity and MHC class II polymorphism in rodents
-
Goüy de Bellocq, J., Charbonnel, N. & Morand, S. Coevolutionary relationship between helminth diversity and MHC class II polymorphism in rodents. J. Evol. Biol. 21, 1144-1150 (2008).
-
(2008)
J. Evol. Biol.
, vol.21
, pp. 1144-1150
-
-
Goüy De Bellocq, J.1
Charbonnel, N.2
Morand, S.3
-
13
-
-
60049096475
-
Major histocompatibility complex (MHC) heterozygote superiority to natural multi-parasite infections in the water vole (Arvicola terrestris)
-
Oliver, M. K., Telfer, S. & Piertney, S. B. Major histocompatibility complex (MHC) heterozygote superiority to natural multi-parasite infections in the water vole (Arvicola terrestris). Proc. R. Soc. London B Biol. Sci. 276, 1119-1128 (2009).
-
(2009)
Proc. R. Soc. London B Biol. Sci.
, vol.276
, pp. 1119-1128
-
-
Oliver, M.K.1
Telfer, S.2
Piertney, S.B.3
-
14
-
-
67749099944
-
Disentangling the web of life
-
Bascompte, J. Disentangling the web of life. Science 325, 416-419 (2009).
-
(2009)
Science
, vol.325
, pp. 416-419
-
-
Bascompte, J.1
-
15
-
-
84881547512
-
Temporal dynamics of direct reciprocal and indirect effects in a host-parasite network
-
Pilosof, S., Fortuna, M. A., Vinarski, M. V., Korallo-Vinarskaya, N. P. & Krasnov, B. R. Temporal dynamics of direct reciprocal and indirect effects in a host-parasite network. J. Anim. Ecol. 82, 987-996 (2013).
-
(2013)
J. Anim. Ecol.
, vol.82
, pp. 987-996
-
-
Pilosof, S.1
Fortuna, M.A.2
Vinarski, M.V.3
Korallo-Vinarskaya, N.P.4
Krasnov, B.R.5
-
17
-
-
77952089984
-
Biogeography and conservation in Southeast Asia: How 2.7 million years of repeated environmental fluctuations affect today's patterns and the future of the remaining refugial-phase biodiversity
-
Woodruff, D. S. Biogeography and conservation in Southeast Asia: how 2.7 million years of repeated environmental fluctuations affect today's patterns and the future of the remaining refugial-phase biodiversity. Biodivers. Conserv. 19, 919-941 (2010).
-
(2010)
Biodivers. Conserv.
, vol.19
, pp. 919-941
-
-
Woodruff, D.S.1
-
18
-
-
77951973196
-
A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies
-
Galan, M., Guivier, E., Caraux, G., Charbonnel, N. & Cosson, J.-F. A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies. BMC Genomics 11, 296 (2010).
-
(2010)
BMC Genomics
, vol.11
, pp. 296
-
-
Galan, M.1
Guivier, E.2
Caraux, G.3
Charbonnel, N.4
Cosson, J.-F.5
-
19
-
-
0038379170
-
Advantage of rare HLA supertype in HIV disease progression
-
Trachtenberg, E. et al. Advantage of rare HLA supertype in HIV disease progression. Nat. Med. 9, 928-935 (2003).
-
(2003)
Nat. Med.
, vol.9
, pp. 928-935
-
-
Trachtenberg, E.1
-
20
-
-
0033388724
-
Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism
-
Sette, A. & Sidney, J. Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism. Immunogenetics 50, 201-212 (1999).
-
(1999)
Immunogenetics
, vol.50
, pp. 201-212
-
-
Sette, A.1
Sidney, J.2
-
21
-
-
0032055915
-
Several common HLA-DR types share largely overlapping peptide binding repertoires
-
Southwood, S. et al. Several common HLA-DR types share largely overlapping peptide binding repertoires. J. Immunol. 160, 3363-3373 (1998).
-
(1998)
J. Immunol.
, vol.160
, pp. 3363-3373
-
-
Southwood, S.1
-
22
-
-
18944395866
-
In silico identification of supertypes for class II MHCs
-
Doytchinova, I. A. & Flower, D. R. In silico identification of supertypes for class II MHCs. J. Immunol. 174, 7085-7095 (2005).
-
(2005)
J. Immunol.
, vol.174
, pp. 7085-7095
-
-
Doytchinova, I.A.1
Flower, D.R.2
-
23
-
-
84860901198
-
Characterization and 454 pyrosequencing of major histocompatibility complex class I genes in the great tit reveal complexity in a passerine system
-
Sepil, I., Moghadam, H. K., Huchard, E. & Sheldon, B. C. Characterization and 454 pyrosequencing of major histocompatibility complex class I genes in the great tit reveal complexity in a passerine system. BMC Evol. Biol. 12, 68 (2012).
-
(2012)
BMC Evol. Biol.
, vol.12
, pp. 68
-
-
Sepil, I.1
Moghadam, H.K.2
Huchard, E.3
Sheldon, B.C.4
-
24
-
-
34548163583
-
Non-random coextinctions in phylogenetically structured mutualistic networks
-
Rezende, E. L., Lavabre, J. E., Guimarães, P. R., Jordano, P. & Bascompte, J. Non-random coextinctions in phylogenetically structured mutualistic networks. Nature 448, 925-928 (2007).
-
(2007)
Nature
, vol.448
, pp. 925-928
-
-
Rezende, E.L.1
Lavabre, J.E.2
Guimarães, P.R.3
Jordano, P.4
Bascompte, J.5
-
25
-
-
0042424615
-
The nested assembly of plant-animal mutualistic networks
-
Bascompte, J., Jordano, P., Melián, C. J. & Olesen, J. M. The nested assembly of plant-animal mutualistic networks. Proc. Natl Acad. Sci. USA 100, 9383-9387 (2003).
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 9383-9387
-
-
Bascompte, J.1
Jordano, P.2
Melián, C.J.3
Olesen, J.M.4
-
26
-
-
77955590909
-
Nestedness versus modularity in ecological networks: Two sides of the same coin?
-
Fortuna, M. A. et al. Nestedness versus modularity in ecological networks: two sides of the same coin? J. Anim. Ecol. 79, 811-817 (2010).
-
(2010)
J. Anim. Ecol.
, vol.79
, pp. 811-817
-
-
Fortuna, M.A.1
-
27
-
-
49249087447
-
A consistent metric for nestedness analysis in ecological systems: Reconciling concept and measurement
-
Almeida-Neto, M., Guimarães, P. R., Loyola, R. D. & Ulrich, W. A consistent metric for nestedness analysis in ecological systems: reconciling concept and measurement. Oikos 117, 1227-1239 (2008).
-
(2008)
Oikos
, vol.117
, pp. 1227-1239
-
-
Almeida-Neto, M.1
Guimarães, P.R.2
Loyola, R.D.3
Ulrich, W.4
-
28
-
-
61849175951
-
The coevolving web of life
-
Thompson, J. N. The coevolving web of life. Am. Nat. 173, 125-140 (2009).
-
(2009)
Am. Nat.
, vol.173
, pp. 125-140
-
-
Thompson, J.N.1
-
29
-
-
43249096495
-
Ecological consequences of genetic diversity
-
Hughes, A. R., Inouye, B. D., Johnson, M. T. J., Underwood, N. & Vellend, M. Ecological consequences of genetic diversity. Ecol. Lett. 11, 609-623 (2008).
-
(2008)
Ecol. Lett.
, vol.11
, pp. 609-623
-
-
Hughes, A.R.1
Inouye, B.D.2
Johnson, M.T.J.3
Underwood, N.4
Vellend, M.5
-
30
-
-
77953244779
-
Deforestation homogenizes tropical parasitoid-host networks
-
Laliberté, E. & Tylianakis, J. M. Deforestation homogenizes tropical parasitoid-host networks. Ecology 91, 1740-1747 (2010).
-
(2010)
Ecology
, vol.91
, pp. 1740-1747
-
-
Laliberté, E.1
Tylianakis, J.M.2
-
31
-
-
84872688293
-
Introduced parasites in food webs: New species, shifting structures?
-
Britton, J. R. Introduced parasites in food webs: new species, shifting structures? Trends Ecol. Evol. 28, 93-99 (2013).
-
(2013)
Trends Ecol. Evol.
, vol.28
, pp. 93-99
-
-
Britton, J.R.1
-
32
-
-
70350489744
-
Rodent-borne diseases and their risks for public health
-
Meerburg, B. G., Singleton, G. R. & Kijlstra, A. Rodent-borne diseases and their risks for public health. Crit. Rev. Microbiol. 35, 221-270 (2009).
-
(2009)
Crit. Rev. Microbiol.
, vol.35
, pp. 221-270
-
-
Meerburg, B.G.1
Singleton, G.R.2
Kijlstra, A.3
-
33
-
-
84898636628
-
The diversity of microparasites of rodents: A comparative analysis that helps in identifying rodent-borne rich habitats in Southeast Asia
-
Bordes, F. et al. The diversity of microparasites of rodents: a comparative analysis that helps in identifying rodent-borne rich habitats in Southeast Asia. Infect. Ecol. Epidemiol. 3, 1-10 (2013).
-
(2013)
Infect. Ecol. Epidemiol.
, vol.3
, pp. 1-10
-
-
Bordes, F.1
-
34
-
-
0141906788
-
Rapid evolutionary dynamics and disease threats to biodiversity
-
Altizer, S., Harvell, D. & Friedle, E. Rapid evolutionary dynamics and disease threats to biodiversity. Trends Ecol. Evol. 18, 589-596 (2003).
-
(2003)
Trends Ecol. Evol.
, vol.18
, pp. 589-596
-
-
Altizer, S.1
Harvell, D.2
Friedle, E.3
-
35
-
-
12444253043
-
Association between major histocompatibility complex class II DRB alleles and parasite load in the hairy-footed gerbil, Gerbillurus paeba, in the southern Kalahari
-
Harf, R. & Sommer, S. Association between major histocompatibility complex class II DRB alleles and parasite load in the hairy-footed gerbil, Gerbillurus paeba, in the southern Kalahari. Mol. Ecol. 14, 85-91 (2005).
-
(2005)
Mol. Ecol.
, vol.14
, pp. 85-91
-
-
Harf, R.1
Sommer, S.2
-
36
-
-
72149127649
-
Diverse MHC IIB allele repertoire increases parasite resistance and body condition in the Long-tailed giant rat (Leopoldamys sabanus)
-
Lenz, T. L., Wells, K., Pfeiffer, M. & Sommer, S. Diverse MHC IIB allele repertoire increases parasite resistance and body condition in the Long-tailed giant rat (Leopoldamys sabanus). BMC Evol. Biol. 9, 269 (2009).
-
(2009)
BMC Evol. Biol.
, vol.9
, pp. 269
-
-
Lenz, T.L.1
Wells, K.2
Pfeiffer, M.3
Sommer, S.4
-
37
-
-
78651447245
-
SESAME (SEquence Sorter & AMplicon Explorer): Genotyping based on high-throughput multiplex amplicon sequencing
-
Meglécz, E. et al. SESAME (SEquence Sorter & AMplicon Explorer): genotyping based on high-throughput multiplex amplicon sequencing. Bioinformatics 27, 277-278 (2011).
-
(2011)
Bioinformatics
, vol.27
, pp. 277-278
-
-
Meglécz, E.1
-
38
-
-
0037246882
-
IMGT/HLA and IMGT/MHC: Sequence databases for the study of the major histocompatibility complex
-
Robinson, J. et al. IMGT/HLA and IMGT/MHC: sequence databases for the study of the major histocompatibility complex. Nucleic Acids Res. 31, 311-314 (2003).
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 311-314
-
-
Robinson, J.1
-
39
-
-
0027217789
-
Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1
-
Brown, J. H. et al. Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1. Nature 364, 33-39 (1993).
-
(1993)
Nature
, vol.364
, pp. 33-39
-
-
Brown, J.H.1
-
40
-
-
15844406550
-
HyPhy: Hypothesis testing using phylogenies
-
Pond, S. L. K., Frost, S. D. W. & Muse, S. V. HyPhy: hypothesis testing using phylogenies. Bioinformatics 21, 676-679 (2005).
-
(2005)
Bioinformatics
, vol.21
, pp. 676-679
-
-
Pond, S.L.K.1
Frost, S.D.W.2
Muse, S.V.3
-
41
-
-
79957613599
-
MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura, K. et al. MEGA5: Molecular Evolutionary Genetics Analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 28, 2731-2739 (2011).
-
(2011)
Mol. Biol. Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
-
42
-
-
44349095887
-
adegenet: A R package for the multivariate analysis of genetic markers
-
Jombart, T. adegenet: a R package for the multivariate analysis of genetic markers. Bioinformatics 24, 1403-1405 (2008).
-
(2008)
Bioinformatics
, vol.24
, pp. 1403-1405
-
-
Jombart, T.1
-
43
-
-
26244464025
-
Comparing community structure identification
-
Danon, L., Diaz-Guilera, A., Duch, J. & Arenas, A. Comparing community structure identification. J. Stat. Mech. Theory Exp. 9, P09008 (2005).
-
(2005)
J. Stat. Mech. Theory Exp.
, vol.9
-
-
Danon, L.1
Diaz-Guilera, A.2
Duch, J.3
Arenas, A.4
-
44
-
-
84861215246
-
Evidence for the 'good genes' model: Association of MHC Class II DRB alleles with ectoparasitism and reproductive state in the neotropical lesser bulldog bat, Noctilio albiventris
-
Schad, J., Dechmann, D. K. N., Voigt, C. C. & Sommer, S. Evidence for the 'good genes' model: Association of MHC Class II DRB alleles with ectoparasitism and reproductive state in the neotropical lesser bulldog bat, Noctilio albiventris. PLoS ONE 7, e37101 (2012).
-
(2012)
PLoS ONE
, vol.7
-
-
Schad, J.1
Dechmann, D.K.N.2
Voigt, C.C.3
Sommer, S.4
-
45
-
-
1042304216
-
APE: Analyses of phylogenetics and evolution in R language
-
Paradis, E., Claude, J. & Strimmer, K. APE: analyses of phylogenetics and evolution in R language. Bioinformatics 20, 289-290 (2004).
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
46
-
-
84862178988
-
A glimpse on the pattern of rodent diversification: A phylogenetic approach
-
Fabre, P., Hautier, L., Dimitrov, D. & Douzery, E. A glimpse on the pattern of rodent diversification: a phylogenetic approach. BMC Evol. Biol. 12, 88 (2012).
-
(2012)
BMC Evol. Biol.
, vol.12
, pp. 88
-
-
Fabre, P.1
Hautier, L.2
Dimitrov, D.3
Douzery, E.4
-
47
-
-
77953629995
-
Revisiting the taxonomy of the Rattini tribe: A phylogeny-based delimitation of species boundaries
-
Pagès, M. et al. Revisiting the taxonomy of the Rattini tribe: a phylogeny-based delimitation of species boundaries. BMC Evol. Biol. 10, 184 (2010).
-
(2010)
BMC Evol. Biol.
, vol.10
, pp. 184
-
-
Pagès, M.1
-
49
-
-
77955395053
-
Plant community properties predict vegetation resilience to herbivore disturbance in the Arctic
-
Speed, J. D. M., Cooper, E. J., Jónsdóttir, I. S., Van Der Wal, R. & Woodin, S. J. Plant community properties predict vegetation resilience to herbivore disturbance in the Arctic. J. Ecol. 98, 1002-1013 (2010).
-
(2010)
J. Ecol.
, vol.98
, pp. 1002-1013
-
-
Speed, J.D.M.1
Cooper, E.J.2
Jónsdóttir, I.S.3
Van Der Wal, R.4
Woodin, S.J.5
-
50
-
-
0034811382
-
An extension of presence/absence coefficients to abundance data: A new look at absence
-
Tamás, J., Podani, J. & Csontos, P. An extension of presence/absence coefficients to abundance data: a new look at absence. J. Veg. Sci. 12, 401-410 (2001).
-
(2001)
J. Veg. Sci.
, vol.12
, pp. 401-410
-
-
Tamás, J.1
Podani, J.2
Csontos, P.3
-
51
-
-
78249245126
-
Null model analysis of species associations using abundance data
-
Ulrich, W. & Gotelli, N. J. Null model analysis of species associations using abundance data. Ecology 91, 3384-3397 (2010).
-
(2010)
Ecology
, vol.91
, pp. 3384-3397
-
-
Ulrich, W.1
Gotelli, N.J.2
-
52
-
-
33745837839
-
Improving the analyses of nestedness for large sets of matrices
-
Guimarães, Jr P. & Guimarães, P. R. Improving the analyses of nestedness for large sets of matrices. Environ. Model. Softw. 21, 1512-1513 (2006).
-
(2006)
Environ. Model. Softw
, vol.21
, pp. 1512-1513
-
-
Guimarães, P.1
Guimarães, P.R.2
-
53
-
-
84892473124
-
A method for detecting modules in quantitative bipartite networks
-
Dormann, C. F. & Strauss, R. A. A method for detecting modules in quantitative bipartite networks. Methods Ecol. Evol. 5, 90-98 (2014).
-
(2014)
Methods Ecol. Evol.
, vol.5
, pp. 90-98
-
-
Dormann, C.F.1
Strauss, R.A.2
-
54
-
-
67650774722
-
Introducing the bipartite Package: Analysing Ecological Networks
-
Dormann, C. F., Gruber, B. & Fründ, J. Introducing the bipartite Package: Analysing Ecological Networks. R News 8, 8-11 (2008).
-
(2008)
R News
, vol.8
, pp. 8-11
-
-
Dormann, C.F.1
Gruber, B.2
Fründ, J.3
-
55
-
-
84867381488
-
A comparative study of ecological specialization estimators
-
Poisot, T., Canard, E., Mouquet, N. & Hochberg, M. E. A comparative study of ecological specialization estimators. Methods Ecol. Evol. 3, 537-544 (2012).
-
(2012)
Methods Ecol. Evol.
, vol.3
, pp. 537-544
-
-
Poisot, T.1
Canard, E.2
Mouquet, N.3
Hochberg, M.E.4
|