메뉴 건너뛰기




Volumn 9, Issue 7, 2003, Pages 928-935

Advantage of rare HLA supertype in HIV disease progression

Author keywords

[No Author keywords available]

Indexed keywords

HLA ANTIGEN; HLA ANTIGEN CLASS 1; PEPTIDE;

EID: 0038379170     PISSN: 10788956     EISSN: None     Source Type: Journal    
DOI: 10.1038/nm893     Document Type: Article
Times cited : (288)

References (49)
  • 1
    • 0026577897 scopus 로고
    • Complexity in the major histocompatibility complex
    • Trowsdale, J. & Campbell, R.D. Complexity in the major histocompatibility complex. Eur. J. Immunogenet. 19, 45-55 (1992).
    • (1992) Eur. J. Immunogenet. , vol.19 , pp. 45-55
    • Trowsdale, J.1    Campbell, R.D.2
  • 2
    • 0025324091 scopus 로고
    • Structure, function, and diversity of class I major histocompatibility complex molecules
    • Bjorkman, P.J. & Parham, P. Structure, function, and diversity of class I major histocompatibility complex molecules. Annu. Rev. Biochem. 59, 253-288 (1990).
    • (1990) Annu. Rev. Biochem. , vol.59 , pp. 253-288
    • Bjorkman, P.J.1    Parham, P.2
  • 3
    • 0023115557 scopus 로고
    • The relation between major histocompatibility complex (MHC) restriction and the capacity of 1a to bind immunogenetic peptides
    • Buus, S., Sette, A., Colon, S., Miles, C. & Grey, H.M. The relation between major histocompatibility complex (MHC) restriction and the capacity of 1a to bind immunogenetic peptides. Science 235, 1353-1358 (1987).
    • (1987) Science , vol.235 , pp. 1353-1358
    • Buus, S.1    Sette, A.2    Colon, S.3    Miles, C.4    Grey, H.M.5
  • 4
    • 0025913521 scopus 로고
    • Common West African HLA antigens are associated with protection from severe malaria
    • Hill, A.V.S. et al. Common West African HLA antigens are associated with protection from severe malaria. Nature 352, 595-600 (1991).
    • (1991) Nature , vol.352 , pp. 595-600
    • Hill, A.V.S.1
  • 5
    • 0033301381 scopus 로고    scopus 로고
    • Polymorphism and evolution of HLA class I and II genes and molecules
    • Little, A.M. & Parham, P. Polymorphism and evolution of HLA class I and II genes and molecules. Rev. Immunogenet. 1, 105-123 (1999).
    • (1999) Rev. Immunogenet. , vol.1 , pp. 105-123
    • Little, A.M.1    Parham, P.2
  • 6
    • 0025147562 scopus 로고
    • Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex molecules
    • Hughes, A.L., Ota, T. & Nei, M. Positive Darwinian selection promotes charge profile diversity in the antigen-binding cleft of class I major-histocompatibility-complex molecules. Mol. Biol. Evol. 7, 515-524 (1990).
    • (1990) Mol. Biol. Evol. , vol.7 , pp. 515-524
    • Hughes, A.L.1    Ota, T.2    Nei, M.3
  • 7
    • 0034533885 scopus 로고    scopus 로고
    • A method for estimating the intensity of overdominant selection from the distribution of allele frequencies
    • Slatkin, M. & Muirhead, C.A. A method for estimating the intensity of overdominant selection from the distribution of allele frequencies. Genetics 156, 2119-2126 (2000).
    • (2000) Genetics , vol.156 , pp. 2119-2126
    • Slatkin, M.1    Muirhead, C.A.2
  • 8
    • 0015515875 scopus 로고
    • Evolutionary significance of the HLA system
    • Bodmer, W.F. Evolutionary significance of the HLA system. Nature 237, 139-145 (1972).
    • (1972) Nature , vol.237 , pp. 139-145
    • Bodmer, W.F.1
  • 9
    • 0031918872 scopus 로고    scopus 로고
    • The immunogenetics of human infectious diseases
    • Hill, A.V.S. The immunogenetics of human infectious diseases. Ann. Rev. Immunol. 16, 593-617 (1998).
    • (1998) Ann. Rev. Immunol. , vol.16 , pp. 593-617
    • Hill, A.V.S.1
  • 10
    • 0034987091 scopus 로고    scopus 로고
    • + T-cell repertoire in long-term nonprogressors and its role in the control of viral load and disease activity
    • + T-cell repertoire in long-term nonprogressors and its role in the control of viral load and disease activity. Hum. Immunol. 62, 561-576 (2001).
    • (2001) Hum. Immunol. , vol.62 , pp. 561-576
    • Propato, A.1
  • 11
    • 0035500512 scopus 로고    scopus 로고
    • Human leucocyte antigen supertypes and immune susceptibility to HIV-1, implications for vaccine design
    • MacDonald, K.S. et al. Human leucocyte antigen supertypes and immune susceptibility to HIV-1, implications for vaccine design. Immunol. Lett. 79, 151-157 (2001).
    • (2001) Immunol. Lett. , vol.79 , pp. 151-157
    • MacDonald, K.S.1
  • 12
    • 0030811688 scopus 로고    scopus 로고
    • Human histocompatibility leukocyte antigen-binding supermotifs predict broadly cross-reactive cytotoxic T lymphocyte responses in patients with acute hepatitis
    • Bertoni, R. et al. Human histocompatibility leukocyte antigen-binding supermotifs predict broadly cross-reactive cytotoxic T lymphocyte responses in patients with acute hepatitis. J. Clin. Invest. 100, 503-513 (1997).
    • (1997) J. Clin. Invest. , vol.100 , pp. 503-513
    • Bertoni, R.1
  • 13
    • 0033830082 scopus 로고    scopus 로고
    • A single CTL clone can recognize a naturally processed HIV-1 epitope presented by two different HLA class I molecules
    • Tomiyama, H., Yamada, N., Komatsu, H., Hirayama, K. & Takiguchi, M. A single CTL clone can recognize a naturally processed HIV-1 epitope presented by two different HLA class I molecules. Eur. J. Immunol. 30, 2521-2530 (2000).
    • (2000) Eur. J. Immunol. , vol.30 , pp. 2521-2530
    • Tomiyama, H.1    Yamada, N.2    Komatsu, H.3    Hirayama, K.4    Takiguchi, M.5
  • 14
    • 0035152281 scopus 로고    scopus 로고
    • Identification of novel HLA-A2-restricted human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte epitopes predicted by the HLA-A2 supertype peptide-binding motif
    • Altfeld, M.A. et al. Identification of novel HLA-A2-restricted human immunodeficiency virus type 1-specific cytotoxic T-lymphocyte epitopes predicted by the HLA-A2 supertype peptide-binding motif. J. Virol. 75, 1301-1311 (2001).
    • (2001) J. Virol. , vol.75 , pp. 1301-1311
    • Altfeld, M.A.1
  • 15
    • 0001935670 scopus 로고
    • The ecological genetics of host-parasite relationships
    • (eds. Taylor, A.E.R. & Muller, R.M.) (Blackwell Oxford)
    • Clarke, B. The ecological genetics of host-parasite relationships. in Genetic aspects of host-parasite relationships. (eds. Taylor, A.E.R. & Muller, R.M.) 87-103 (Blackwell Oxford, 1976).
    • (1976) Genetic Aspects of Host-Parasite Relationships , pp. 87-103
    • Clarke, B.1
  • 16
    • 0038675682 scopus 로고
    • MHC organization of the rat: Evolutionary considerations
    • (eds. Kelsoe, G. & Schulze, D.H.) (University of Texas Press, Austin)
    • Howard, J.C. MHC organization of the rat: evolutionary considerations. in Evolution and Vertebrate Immunity (eds. Kelsoe, G. & Schulze, D.H.) 397-411 (University of Texas Press, Austin, 1987).
    • (1987) Evolution and Vertebrate Immunity , pp. 397-411
    • Howard, J.C.1
  • 17
    • 0031806468 scopus 로고    scopus 로고
    • Influence of host genes on HIV-1 disease progression
    • Roger, M. Influence of host genes on HIV-1 disease progression. FASEB J. 12, 625-632 (1998).
    • (1998) FASEB J. , vol.12 , pp. 625-632
    • Roger, M.1
  • 18
    • 1242348716 scopus 로고    scopus 로고
    • A review of the role of the human leukocyte antigen (HLA) system as a host immunogenetic factor influencing HIV transmission and course of infection with progression to AIDS
    • (eds. Korber, B. et al.) (Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM)
    • Trachtenberg, E.A. & Erlich, H.A. A review of the role of the human leukocyte antigen (HLA) system as a host immunogenetic factor influencing HIV transmission and course of infection with progression to AIDS. in HIV Molecular Immunology Database (eds. Korber, B. et al.) 1-60 (Theoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, NM., 2001).
    • (2001) HIV Molecular Immunology Database , pp. 1-60
    • Trachtenberg, E.A.1    Erlich, H.A.2
  • 19
    • 0033548497 scopus 로고    scopus 로고
    • HLA and HIV-1: Heterozygote advantage and B*35-Cw* 04 disadvantage
    • Carrington, M. et al. HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage. Science 283, 1748-1752 (1999).
    • (1999) Science , vol.283 , pp. 1748-1752
    • Carrington, M.1
  • 20
    • 0033502040 scopus 로고    scopus 로고
    • Consistent associations of HLA class I and II and transporter gene products with progression of human immunodeficiency virus type 1 infection in homosexual men
    • Keet, I.P. et al, Consistent associations of HLA class I and II and transporter gene products with progression of human immunodeficiency virus type 1 infection in homosexual men. J. Infect. Dis. 180, 299-309 (1999).
    • (1999) J. Infect. Dis. , vol.180 , pp. 299-309
    • Keet, I.P.1
  • 22
    • 0033388724 scopus 로고    scopus 로고
    • Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism
    • Sette, A. & Sidney, J. Nine major HLA class I supertypes account for the vast preponderance of HLA-A and -B polymorphism. Immunogenetics 50, 201-112 (1999).
    • (1999) Immunogenetics , vol.50 , pp. 201-112
    • Sette, A.1    Sidney, J.2
  • 23
    • 0006582115 scopus 로고    scopus 로고
    • Influence of combinations of human major histocompatibility complex genes on the course of HIV-1 infection
    • Kaslow, R.A. et al. Influence of combinations of human major histocompatibility complex genes on the course of HIV-1 infection. Nat. Med. 2, 405-411 (1996).
    • (1996) Nat. Med. , vol.2 , pp. 405-411
    • Kaslow, R.A.1
  • 24
    • 0033152036 scopus 로고    scopus 로고
    • New class I and II HLA alleles strongly associated with opposite patterns of progression to AIDS
    • Hendel, H. et al. New class I and II HLA alleles strongly associated with opposite patterns of progression to AIDS. J. Immunol. 162, 6942-6946 (1999).
    • (1999) J. Immunol. , vol.162 , pp. 6942-6946
    • Hendel, H.1
  • 25
    • 0026546828 scopus 로고
    • Polymorphism, recombination and linkage disequilibrium within the HLA class II region
    • Begovich, A.B. et al. Polymorphism, recombination and linkage disequilibrium within the HLA class II region. J. Immunol. 148, 249-258 (1992).
    • (1992) J. Immunol. , vol.148 , pp. 249-258
    • Begovich, A.B.1
  • 26
    • 0035913225 scopus 로고    scopus 로고
    • Evolution and transmission of stable CTL escape mutations in HIV infection
    • Goulder, P.J. et al. Evolution and transmission of stable CTL escape mutations in HIV infection. Nature 412, 334-338 (2001).
    • (2001) Nature , vol.412 , pp. 334-338
    • Goulder, P.J.1
  • 28
    • 0032614642 scopus 로고    scopus 로고
    • Hypothesis selection and testing by the MDL principle
    • Rissanen, J. Hypothesis selection and testing by the MDL principle. Comput. J. 42, 260-269 (1999).
    • (1999) Comput. J. , vol.42 , pp. 260-269
    • Rissanen, J.1
  • 30
    • 0030924546 scopus 로고    scopus 로고
    • Frequency of HLA allele-specific peptide motifs in HIV-1 proteins correlates with the allele's association with relative rates of disease progression after HIV-1 infection
    • Nelson, G.W., Kaslow, R. & Mann, D.L. Frequency of HLA allele-specific peptide motifs in HIV-1 proteins correlates with the allele's association with relative rates of disease progression after HIV-1 infection. Proc. Natl. Acad. Sci. USA 94, 9802-9807 (1997).
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 9802-9807
    • Nelson, G.W.1    Kaslow, R.2    Mann, D.L.3
  • 31
    • 0034232826 scopus 로고    scopus 로고
    • Association of race and gender with HIV-1 RNA levels and immunologic progression
    • Anastos, K. et al. Association of race and gender with HIV-1 RNA levels and immunologic progression. J. Acquir. Immune Defic. Syndr. 24, 218-226 (2000).
    • (2000) J. Acquir. Immune Defic. Syndr. , vol.24 , pp. 218-226
    • Anastos, K.1
  • 32
    • 0026530178 scopus 로고
    • Acquired immune deficiency syndrome occurring within 5 years of infection with human immune deficiency virus type-1: The Multicenter AIDS Cohort Study
    • Phair, J. et al. Acquired immune deficiency syndrome occurring within 5 years of infection with human immune deficiency virus type-1: the Multicenter AIDS Cohort Study. J. Acquir. Immune Defic. Syndr. 5, 490-496 (1992).
    • (1992) J. Acquir. Immune Defic. Syndr. , vol.5 , pp. 490-496
    • Phair, J.1
  • 33
    • 0026685065 scopus 로고
    • Predictors of the risk of development of acquired immunodeficiency syndrome within 24 months among gay men seropositive for human immunodeficiency virus type 1: A report from the Multicenter AIDS Cohort Study
    • Saah, A.J. et al. Predictors of the risk of development of acquired immunodeficiency syndrome within 24 months among gay men seropositive for human immunodeficiency virus type 1: a report from the Multicenter AIDS Cohort Study. Am. J. Epidemiol. 135, 1147-1155 (1992).
    • (1992) Am. J. Epidemiol. , vol.135 , pp. 1147-1155
    • Saah, A.J.1
  • 34
    • 0034699512 scopus 로고    scopus 로고
    • Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia
    • Allen, T.M. et al. Tat-specific cytotoxic T lymphocytes select for SIV escape variants during resolution of primary viraemia, Nature 407, 386-390 (2000).
    • (2000) Nature , vol.407 , pp. 386-390
    • Allen, T.M.1
  • 35
    • 0031253703 scopus 로고    scopus 로고
    • HIV-1 reverse transcriptase-specific CTL against conserved epitopes do not protect against progression to AIDS
    • van der Burg, S.H. et al. HIV-1 reverse transcriptase-specific CTL against conserved epitopes do not protect against progression to AIDS. J. Immunol. 159, 3648-3654 (1997).
    • (1997) J. Immunol. , vol.159 , pp. 3648-3654
    • Van der Burg, S.H.1
  • 36
    • 0037165969 scopus 로고    scopus 로고
    • Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level
    • Moore, C.B. et al. Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level. Science 296, 1439-1443 (2002).
    • (2002) Science , vol.296 , pp. 1439-1443
    • Moore, C.B.1
  • 37
    • 0026488418 scopus 로고
    • Different rates of HLA class I molecule assembly which are determined by amino acid sequence in the alpha 2 domain
    • Hill, A., Takiguchi, M. & McMichael, A. Different rates of HLA class I molecule assembly which are determined by amino acid sequence in the alpha 2 domain. Immunogenetics 37, 95-101 (1993).
    • (1993) Immunogenetics , vol.37 , pp. 95-101
    • Hill, A.1    Takiguchi, M.2    McMichael, A.3
  • 38
    • 0036105538 scopus 로고    scopus 로고
    • The cell biology of MHC class I antigen presentation
    • Williams, A., Peh, C.A. & Elliott, T. The cell biology of MHC class I antigen presentation. Tissue Antigens 59, 3-17 (2002).
    • (2002) Tissue Antigens , vol.59 , pp. 3-17
    • Williams, A.1    Peh, C.A.2    Elliott, T.3
  • 39
    • 0036138764 scopus 로고    scopus 로고
    • The magnitude and specificity of influenza A virus-specific cytotoxic T-lymphocyte responses in humans is related to HLA-A and -B phenotype
    • Boon, A.C. et al. The magnitude and specificity of influenza A virus-specific cytotoxic T-lymphocyte responses in humans is related to HLA-A and -B phenotype. J. Virol. 76, 582-590 (2002).
    • (2002) J. Virol. , vol.76 , pp. 582-590
    • Boon, A.C.1
  • 40
    • 0036340475 scopus 로고    scopus 로고
    • Clustering patterns of cytotoxic T-lymphocyte epitopes in human immunodeficiency virus type 1 (HIV-1) proteins reveal imprints of immune evasion on HIV-1 global variation
    • Yusim, K. et al. Clustering patterns of cytotoxic T-lymphocyte epitopes in human immunodeficiency virus type 1 (HIV-1) proteins reveal imprints of immune evasion on HIV-1 global variation. J. Virol. 76, 8757-8768 (2002).
    • (2002) J. Virol. , vol.76 , pp. 8757-8768
    • Yusim, K.1
  • 41
    • 0037015016 scopus 로고    scopus 로고
    • Evidence for an ancient selective sweep in the MHC class I gene repertoire of chimpanzees
    • de Groot, N.G. et al. Evidence for an ancient selective sweep in the MHC class I gene repertoire of chimpanzees. Proc. Natl. Acad. Sci. USA 99, 11748-11753 (2002).
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 11748-11753
    • De Groot, N.G.1
  • 42
    • 0026298073 scopus 로고
    • Rapid HLA-DPB typing using enzymatically amplified DNA and nonradioactive sequence specific oligonucleotide probes
    • Bugawan, T.L., Begovich, A.B. & Erlich, H.A. Rapid HLA-DPB typing using enzymatically amplified DNA and nonradioactive sequence specific oligonucleotide probes. Immunogenetics 34, 413 (1991).
    • (1991) Immunogenetics , vol.34 , pp. 413
    • Bugawan, T.L.1    Begovich, A.B.2    Erlich, H.A.3
  • 43
    • 0025782805 scopus 로고
    • Rapid typing of HLA-DQB1 DNA polymorphism using nonradioactive oligonucleotide probes and amplified DNA
    • Bugawan, T.L. & Erlich, H.A. Rapid typing of HLA-DQB1 DNA polymorphism using nonradioactive oligonucleotide probes and amplified DNA. Immunogenetics 33, 163-170 (1991).
    • (1991) Immunogenetics , vol.33 , pp. 163-170
    • Bugawan, T.L.1    Erlich, H.A.2
  • 44
    • 0028001030 scopus 로고
    • A method for typing polymorphism at the HLA-A locus using PCR amplification and immobilized oligonucleotide probes
    • Bugawan, T.L., Apple, R. & Erlich, H.A. A method for typing polymorphism at the HLA-A locus using PCR amplification and immobilized oligonucleotide probes. Tissue Antigens 44, 137-147 (1994).
    • (1994) Tissue Antigens , vol.44 , pp. 137-147
    • Bugawan, T.L.1    Apple, R.2    Erlich, H.A.3
  • 45
    • 0026027158 scopus 로고
    • Rapid typing of DNA sequence polymorphism at the HLA-DRB1 locus using the polymerase chain reaction and nonradioactive oligonucleotide probes
    • Scharf, S.J., Griffith, R.L. & Erlich, H.A. Rapid typing of DNA sequence polymorphism at the HLA-DRB1 locus using the polymerase chain reaction and nonradioactive oligonucleotide probes. Hum. Immunol. 30, 190-201 (1991).
    • (1991) Hum. Immunol. , vol.30 , pp. 190-201
    • Scharf, S.J.1    Griffith, R.L.2    Erlich, H.A.3
  • 46
    • 0038675681 scopus 로고    scopus 로고
    • PCR-based methods of HLA typing
    • (eds. Carrington, M. & Hoelzel, A.R.) (Oxford University Press, Oxford)
    • Erlich, H.A. & Trachtenberg E.A. PCR-based methods of HLA typing. in Molecular Epidemiology: A Practical Approach (eds. Carrington, M. & Hoelzel, A.R.) 181-207 (Oxford University Press, Oxford, 2001).
    • (2001) Molecular Epidemiology: A Practical Approach , pp. 181-207
    • Erlich, H.A.1    Trachtenberg, E.A.2
  • 47
    • 0034846053 scopus 로고    scopus 로고
    • Analysis of the frequencies of HLA-A, B, and C alletes and haplotypes in the five major ethnic groups of the United States reveals high levels of diversity in these loci and contrasting distribution patterns in these populations
    • Cao, K. et al. Analysis of the frequencies of HLA-A, B, and C alletes and haplotypes in the five major ethnic groups of the United States reveals high levels of diversity in these loci and contrasting distribution patterns in these populations. Hum. Immunol. 62, 1009-1030 (2001).
    • (2001) Hum. Immunol. , vol.62 , pp. 1009-1030
    • Cao, K.1
  • 49
    • 0002002528 scopus 로고
    • A simplified Monte-Carlo significance test procedure
    • Hope, A.C.A. A simplified Monte-Carlo significance test procedure. J. R. Stat. Soc. Ser. B, 582-598 (1968).
    • (1968) J. R. Stat. Soc. Ser. B , pp. 582-598
    • Hope, A.C.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.