Sesame (SEquence Sorter & AMplicon Explorer): Genotyping based on high-throughput multiplex amplicon sequencing

Bioinformatics

Volumn 27, Issue 2, 2011, Pages 277-278

  Meglécz, Emese ^a   Piry, Sylvain ^b   Desmarais, Erick ^c   Galan, Maxime ^b   Gilles, André ^a   Guivier, Emmanuel ^b   Pech, Nicolas ^a   Martin, Jean François ^b  

^a AIX MARSEILLE UNIVERSITY   (France)

^b INSTITUT DE RECHERCHE POUR LE DÉVELOPPEMENT   (France)

^c UNIV MONTPELLIER   (France)

Author keywords

[No Author keywords available]

Indexed keywords

SESAMUM INDICUM;

ALLELE; ARTICLE; COMPUTER PROGRAM; DNA SEQUENCE; GENOTYPE; HIGH THROUGHPUT NUCLEOTIDE SEQUENCING; INTERNET; METHODOLOGY;

ALLELES; GENOTYPE; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; INTERNET; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 78651447245     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btq641     Document Type: Article

References (3)

1. Edgar,R.C. (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res., 32, 1792-1797.
2. Galan,M. et al. (2010) A 454 multiplex sequencing method for rapid and reliable genotyping of highly polymorphic genes in large-scale studies. BMC Genomics, 11, 269.
3. Katoh,K. et al. (2005) MAFFTversion 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res., 33, 511-518.