-
1
-
-
0035001937
-
The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis
-
Ledent V, Vervoort M. The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis. Genome Res. 2001;11:754-70.
-
(2001)
Genome Res
, vol.11
, pp. 754-770
-
-
Ledent, V.1
Vervoort, M.2
-
2
-
-
0042421751
-
The Arabidopsis basic/helix-loop-helix transcription factor family
-
Toledo-Ortiz G, Huq E, Quail PH. The Arabidopsis basic/helix-loop-helix transcription factor family. Plant Cell. 2003;15:1749-70.
-
(2003)
Plant Cell
, vol.15
, pp. 1749-1770
-
-
Toledo-Ortiz, G.1
Huq, E.2
Quail, P.H.3
-
3
-
-
18644383812
-
Analysis of the transcriptional activation domain of the Drosophila tango bHLH-PAS transcription factor
-
Sonnenfeld MJ, Delvecchio C, Sun X. Analysis of the transcriptional activation domain of the Drosophila tango bHLH-PAS transcription factor. Dev Genes Evol. 2005;215:221-9.
-
(2005)
Dev Genes Evol
, vol.215
, pp. 221-229
-
-
Sonnenfeld, M.J.1
Delvecchio, C.2
Sun, X.3
-
4
-
-
0024554495
-
A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and myc proteins
-
Murre C, McCaw PS, Baltimore D. A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and myc proteins. Cell. 1989;56:777-83.
-
(1989)
Cell
, vol.56
, pp. 777-783
-
-
Murre, C.1
McCaw, P.S.2
Baltimore, D.3
-
5
-
-
0032925848
-
Positional dependence, cliques, and predictive motifs in the bHLH protein domain
-
Atchley WR, Terhalle W, Dress A. Positional dependence, cliques, and predictive motifs in the bHLH protein domain. J Mol Evol. 1999;48:501-16.
-
(1999)
J Mol Evol
, vol.48
, pp. 501-516
-
-
Atchley, W.R.1
Terhalle, W.2
Dress, A.3
-
6
-
-
0033980393
-
Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms
-
Massari ME, Murre C. Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms. Mol Cell Biol. 2000;20:429-40.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 429-440
-
-
Massari, M.E.1
Murre, C.2
-
8
-
-
0031008399
-
A natural classification of the basic helix-loop-helix class of transcription factors
-
Atchley WR, Fitch WM. A natural classification of the basic helix-loop-helix class of transcription factors. Proc Natl Acad Sci U S A. 1997;94:5172-6.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 5172-5176
-
-
Atchley, W.R.1
Fitch, W.M.2
-
9
-
-
33947252158
-
Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics
-
Simionato E, Ledent V, Richards G, Thomas-Chollier M, Kerner P, Coornaert D, et al. Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics. BMC Evol Biol. 2007;7(33):1-18.
-
(2007)
BMC Evol Biol
, vol.7
, Issue.33
, pp. 1-18
-
-
Simionato, E.1
Ledent, V.2
Richards, G.3
Thomas-Chollier, M.4
Kerner, P.5
Coornaert, D.6
-
10
-
-
0029686266
-
Proteins of the Myc network: essential regulators of cell growth and differentiation
-
Henriksson M, Luscher B. Proteins of the Myc network: essential regulators of cell growth and differentiation. Adv Cancer Res. 1996;68:109-82.
-
(1996)
Adv Cancer Res
, vol.68
, pp. 109-182
-
-
Henriksson, M.1
Luscher, B.2
-
11
-
-
0031806044
-
The molecular role of Myc in growth and transformation: recent discoveries lead to new insights
-
Facchini LM, Penn LZ. The molecular role of Myc in growth and transformation: recent discoveries lead to new insights. FASEB J. 1998;12:633-51.
-
(1998)
FASEB J
, vol.12
, pp. 633-651
-
-
Facchini, L.M.1
Penn, L.Z.2
-
12
-
-
0034661187
-
Mitf from neural crest to melanoma: signal transduction and transcription in the melanocyte lineage
-
Goding CR. Mitf from neural crest to melanoma: signal transduction and transcription in the melanocyte lineage. Genes Dev. 2000;14:1712-28.
-
(2000)
Genes Dev
, vol.14
, pp. 1712-1728
-
-
Goding, C.R.1
-
13
-
-
0025939047
-
Id proteins Id1 and Id2 selectively inhibit DNA binding by one class of helix-loop-helix proteins
-
Sun XH, Copeland NG, Jenkins NA, Baltimore D. Id proteins Id1 and Id2 selectively inhibit DNA binding by one class of helix-loop-helix proteins. Mol Cell Biol. 1991;11:5603-11.
-
(1991)
Mol Cell Biol
, vol.11
, pp. 5603-5611
-
-
Sun, X.H.1
Copeland, N.G.2
Jenkins, N.A.3
Baltimore, D.4
-
14
-
-
0032054380
-
The function of hairy-related bHLH repressor proteins in cell fate decisions
-
Fisher A, Caudy M. The function of hairy-related bHLH repressor proteins in cell fate decisions. Bioessays. 1998;20:298-306.
-
(1998)
Bioessays
, vol.20
, pp. 298-306
-
-
Fisher, A.1
Caudy, M.2
-
15
-
-
0034210603
-
Characterization of the human and mouse HEY1, HEY2, and HEYL genes: cloning, mapping, and mutation screening of a new bHLH gene family
-
Steidl C, Leimeister C, Klamt B, Maier M, Nanda I, Dixon M, et al. Characterization of the human and mouse HEY1, HEY2, and HEYL genes: cloning, mapping, and mutation screening of a new bHLH gene family. Genomics. 2000;66:195-203.
-
(2000)
Genomics
, vol.66
, pp. 195-203
-
-
Steidl, C.1
Leimeister, C.2
Klamt, B.3
Maier, M.4
Nanda, I.5
Dixon, M.6
-
16
-
-
0030156554
-
Collier, a novel regulator of Drosophila head development, is expressed in a single mitotic domain
-
Crozatier M, Valle D, Dubois L, Ibnsouda S, Vincent A. Collier, a novel regulator of Drosophila head development, is expressed in a single mitotic domain. Curr Biol. 1996;6:707-18.
-
(1996)
Curr Biol
, vol.6
, pp. 707-718
-
-
Crozatier, M.1
Valle, D.2
Dubois, L.3
Ibnsouda, S.4
Vincent, A.5
-
17
-
-
0037694799
-
The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity
-
Heim MA, Jakoby M, Werber M, Martin C, Weisshaar B, Bailey PC. The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. Mol Biol Evol. 2003;20:735-47.
-
(2003)
Mol Biol Evol
, vol.20
, pp. 735-747
-
-
Heim, M.A.1
Jakoby, M.2
Werber, M.3
Martin, C.4
Weisshaar, B.5
Bailey, P.C.6
-
18
-
-
33747087226
-
Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis
-
Li X, Duan X, Jiang H, Sun Y, Tang Y, Yuan Z, et al. Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis. Plant Physiol. 2006;141:1167-84.
-
(2006)
Plant Physiol
, vol.141
, pp. 1167-1184
-
-
Li, X.1
Duan, X.2
Jiang, H.3
Sun, Y.4
Tang, Y.5
Yuan, Z.6
-
19
-
-
77954345059
-
Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae
-
Carretero-Paulet L, Galstyan A, Roig-Villanova I, Martinez-Garcia JF, Bilbao-Castro JR, Robertson DL. Genome-wide classification and evolutionary analysis of the bHLH family of transcription factors in Arabidopsis, poplar, rice, moss, and algae. Plant Physiol. 2010;153:1398-412.
-
(2010)
Plant Physiol
, vol.153
, pp. 1398-1412
-
-
Carretero-Paulet, L.1
Galstyan, A.2
Roig-Villanova, I.3
Martinez-Garcia, J.F.4
Bilbao-Castro, J.R.5
Robertson, D.L.6
-
20
-
-
80755169485
-
Genetics and control of tomato fruit ripening and quality attributes
-
Klee HJ, Giovannoni JJ. Genetics and control of tomato fruit ripening and quality attributes. Annu Rev Genet. 2011;45:41-59.
-
(2011)
Annu Rev Genet
, vol.45
, pp. 41-59
-
-
Klee, H.J.1
Giovannoni, J.J.2
-
21
-
-
84863693752
-
The tomato genome sequence provides insights into fleshy fruit evolution
-
Consortium TTG. The tomato genome sequence provides insights into fleshy fruit evolution. Nature. 2012;485:635-41.
-
(2012)
Nature
, vol.485
, pp. 635-641
-
-
Consortium, T.T.G.1
-
22
-
-
0030794453
-
Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition
-
Shimizu T, Toumoto A, Ihara K, Shimizu M, Kyogoku Y, Ogawa N, et al. Crystal structure of PHO4 bHLH domain-DNA complex: flanking base recognition. EMBO J. 1997;16:4689-97.
-
(1997)
EMBO J
, vol.16
, pp. 4689-4697
-
-
Shimizu, T.1
Toumoto, A.2
Ihara, K.3
Shimizu, M.4
Kyogoku, Y.5
Ogawa, N.6
-
23
-
-
84875514782
-
A Large-scale identification of direct targets of the tomato MADS box transcription factor RIPENING INHIBITOR reveals the regulation of fruit ripening
-
Fujisawa M, Nakano T, Shima Y, Ito Y. A Large-scale identification of direct targets of the tomato MADS box transcription factor RIPENING INHIBITOR reveals the regulation of fruit ripening. Plant Cell. 2013;25:371-86.
-
(2013)
Plant Cell
, vol.25
, pp. 371-386
-
-
Fujisawa, M.1
Nakano, T.2
Shima, Y.3
Ito, Y.4
-
24
-
-
0037192861
-
TGTCACA motif is a novel cis-regulatory enhancer element involved in fruit-specific expression of the cucumisin gene
-
Yamagata H, Yonesu K, Hirata A, Aizono Y. TGTCACA motif is a novel cis-regulatory enhancer element involved in fruit-specific expression of the cucumisin gene. J Biol Chem. 2002;277:11582-90.
-
(2002)
J Biol Chem
, vol.277
-
-
Yamagata, H.1
Yonesu, K.2
Hirata, A.3
Aizono, Y.4
-
25
-
-
27944446929
-
AtbHLH29 of Arabidopsis thaliana is a functional ortholog of tomato FER involved in controlling iron acquisition in strategy I plants
-
Yuan YX, Zhang J, Wang DW, Ling HQ. AtbHLH29 of Arabidopsis thaliana is a functional ortholog of tomato FER involved in controlling iron acquisition in strategy I plants. Cell Res. 2005;15:613-21.
-
(2005)
Cell Res
, vol.15
, pp. 613-621
-
-
Yuan, Y.X.1
Zhang, J.2
Wang, D.W.3
Ling, H.Q.4
-
26
-
-
40249095934
-
FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis
-
Yuan Y, Wu H, Wang N, Li J, Zhao W, Du J, et al. FIT interacts with AtbHLH38 and AtbHLH39 in regulating iron uptake gene expression for iron homeostasis in Arabidopsis. Cell Res. 2008;18:385-97.
-
(2008)
Cell Res
, vol.18
, pp. 385-397
-
-
Yuan, Y.1
Wu, H.2
Wang, N.3
Li, J.4
Zhao, W.5
Du, J.6
-
27
-
-
77956819375
-
The bHLH transcription factor POPEYE regulates response to iron deficiency in Arabidopsis roots
-
Long TA, Tsukagoshi H, Busch W, Lahner B, Salt DE, Benfey PN. The bHLH transcription factor POPEYE regulates response to iron deficiency in Arabidopsis roots. Plant Cell. 2010;22:2219-36.
-
(2010)
Plant Cell
, vol.22
, pp. 2219-2236
-
-
Long, T.A.1
Tsukagoshi, H.2
Busch, W.3
Lahner, B.4
Salt, D.E.5
Benfey, P.N.6
-
28
-
-
84873261716
-
Requirement and functional redundancy of Ib subgroup bHLH proteins for iron deficiency responses and uptake in Arabidopsis thaliana
-
Wang N, Cui Y, Liu Y, Fan H, Du J, Huang Z, et al. Requirement and functional redundancy of Ib subgroup bHLH proteins for iron deficiency responses and uptake in Arabidopsis thaliana. Mol Plant. 2013;6:503-13.
-
(2013)
Mol Plant
, vol.6
, pp. 503-513
-
-
Wang, N.1
Cui, Y.2
Liu, Y.3
Fan, H.4
Du, J.5
Huang, Z.6
-
29
-
-
0037108975
-
The tomato fer gene encoding a bHLH protein controls iron-uptake responses in roots
-
Ling HQ, Bauer P, Bereczky Z, Keller B, Ganal M. The tomato fer gene encoding a bHLH protein controls iron-uptake responses in roots. Proc Natl Acad Sci U S A. 2002;99:13938-43.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
-
-
Ling, H.Q.1
Bauer, P.2
Bereczky, Z.3
Keller, B.4
Ganal, M.5
-
30
-
-
84855696745
-
Morphological evolution in land plants: new designs with old genes
-
Pires ND, Dolan L. Morphological evolution in land plants: new designs with old genes. Philos Trans R Soc Lond B Biol Sci. 2012;367:508-18.
-
(2012)
Philos Trans R Soc Lond B Biol Sci
, vol.367
, pp. 508-518
-
-
Pires, N.D.1
Dolan, L.2
-
31
-
-
77952222149
-
Origin and diversification of basic-helix-loop-helix proteins in plants
-
Pires N, Dolan L. Origin and diversification of basic-helix-loop-helix proteins in plants. Mol Biol Evol. 2010;27:862-74.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 862-874
-
-
Pires, N.1
Dolan, L.2
-
32
-
-
22744445156
-
Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes
-
Rodriguez-Ezpeleta N, Brinkmann H, Burey SC, Roure B, Burger G, Loffelhardt W, et al. Monophyly of primary photosynthetic eukaryotes: green plants, red algae, and glaucophytes. Curr Biol. 2005;15:1325-30.
-
(2005)
Curr Biol
, vol.15
, pp. 1325-1330
-
-
Rodriguez-Ezpeleta, N.1
Brinkmann, H.2
Burey, S.C.3
Roure, B.4
Burger, G.5
Loffelhardt, W.6
-
33
-
-
65249109213
-
Origin and radiation of the earliest vascular land plants
-
Steemans P, Herisse AL, Melvin J, Miller MA, Paris F, Verniers J, et al. Origin and radiation of the earliest vascular land plants. Science. 2009;324:353.
-
(2009)
Science
, vol.324
, pp. 353
-
-
Steemans, P.1
Herisse, A.L.2
Melvin, J.3
Miller, M.A.4
Paris, F.5
Verniers, J.6
-
34
-
-
33749357831
-
Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice
-
Rizzon C, Ponger L, Gaut BS. Striking similarities in the genomic distribution of tandemly arrayed genes in Arabidopsis and rice. PLoS Comput Biol. 2006;2:989-1000.
-
(2006)
PLoS Comput Biol
, vol.2
, pp. 989-1000
-
-
Rizzon, C.1
Ponger, L.2
Gaut, B.S.3
-
35
-
-
0029852474
-
Identical major gene loci for heavy metal tolerances that have independently evolved in different local populations and subspecies of Silene vulgaris
-
Schat H, Vooijs R, Kuiper E. Identical major gene loci for heavy metal tolerances that have independently evolved in different local populations and subspecies of Silene vulgaris. Evolution. 1996;50:1888-95.
-
(1996)
Evolution
, vol.50
, pp. 1888-1895
-
-
Schat, H.1
Vooijs, R.2
Kuiper, E.3
|