-
1
-
-
77953896432
-
Cell signaling by receptor tyrosine kinases
-
M.A. Lemmon, and J. Schlessinger Cell signaling by receptor tyrosine kinases Cell 141 2010 1117 11134 http://dx.doi.org/10.1016/j.cell.2010.06.011
-
(2010)
Cell
, vol.141
, pp. 1117-11134
-
-
Lemmon, M.A.1
Schlessinger, J.2
-
2
-
-
0037145061
-
Dimerization and activation of EGF receptor
-
J. Schlessinger Dimerization and activation of EGF receptor Receptor 110 2002 669 672
-
(2002)
Receptor
, vol.110
, pp. 669-672
-
-
Schlessinger, J.1
-
3
-
-
32044464123
-
Epidermal growth factor receptor (EGFR) signaling in cancer
-
N. Normanno, A. De Luca, C. Bianco, L. Strizzi, M. Mancino, and M.R. Maiello, et al. Epidermal growth factor receptor (EGFR) signaling in cancer Gene 366 2006 2 16 http://dx.doi.org/10.1016/j.gene.2005.10.018
-
(2006)
Gene
, vol.366
, pp. 2-16
-
-
Normanno, N.1
De Luca, A.2
Bianco, C.3
Strizzi, L.4
Mancino, M.5
Maiello, M.R.6
-
4
-
-
18744405139
-
The ErbB receptors and their ligands in cancer: An overview
-
N. Normanno, C. Bianco, L. Strizzi, M. Mancino, M.R. Maiello, and A. De Luca, et al. The ErbB receptors and their ligands in cancer: an overview Curr. Drug Targets 6 2005 243 257
-
(2005)
Curr. Drug Targets
, vol.6
, pp. 243-257
-
-
Normanno, N.1
Bianco, C.2
Strizzi, L.3
Mancino, M.4
Maiello, M.R.5
De Luca, A.6
-
5
-
-
67549145398
-
Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment
-
N. Jura, N.F. Endres, K. Engel, S. Deindl, R. Das, and M.H. Lamers, et al. Mechanism for activation of the EGF receptor catalytic domain by the juxtamembrane segment Cell 137 2009 1293 1307 http://dx.doi.org/10.1016/j.cell.2009.04.025
-
(2009)
Cell
, vol.137
, pp. 1293-1307
-
-
Jura, N.1
Endres, N.F.2
Engel, K.3
Deindl, S.4
Das, R.5
Lamers, M.H.6
-
6
-
-
33745002702
-
An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor
-
X. Zhang, J. Gureasko, K. Shen, P.A. Cole, and J. Kuriyan An allosteric mechanism for activation of the kinase domain of epidermal growth factor receptor Cell 125 2006 1137 1149 10.1016/j.cell.2006.05.013
-
(2006)
Cell
, vol.125
, pp. 1137-1149
-
-
Zhang, X.1
Gureasko, J.2
Shen, K.3
Cole, P.A.4
Kuriyan, J.5
-
7
-
-
84873280409
-
Conformational coupling across the plasma membrane in activation of the EGF receptor
-
N.F. Endres, R. Das, A.W. Smith, A. Arkhipov, E. Kovacs, and Y. Huang, et al. Conformational coupling across the plasma membrane in activation of the EGF receptor Cell 152 2013 543 556 http://dx.doi.org/10.1016/j.cell.2012.12.032
-
(2013)
Cell
, vol.152
, pp. 543-556
-
-
Endres, N.F.1
Das, R.2
Smith, A.W.3
Arkhipov, A.4
Kovacs, E.5
Huang, Y.6
-
8
-
-
67449146917
-
The juxtamembrane region of the EGF receptor functions as an activation domain
-
M. Red Brewer, S.H. Choi, D. Alvarado, K. Moravcevic, A. Pozzi, and M.A. Lemmon, et al. The juxtamembrane region of the EGF receptor functions as an activation domain Mol. Cell 34 2009 641 651
-
(2009)
Mol. Cell
, vol.34
, pp. 641-651
-
-
Red Brewer, M.1
Choi, S.H.2
Alvarado, D.3
Moravcevic, K.4
Pozzi, A.5
Lemmon, M.A.6
-
9
-
-
67549144420
-
The juxtamembrane region of EGFR takes center stage
-
S.R. Hubbard The juxtamembrane region of EGFR takes center stage Cell 137 2009 1181 1183
-
(2009)
Cell
, vol.137
, pp. 1181-1183
-
-
Hubbard, S.R.1
-
10
-
-
0028788339
-
Activation of the EGF receptor by insertional mutations in its juxtamembrane regions
-
A. Sorokin Activation of the EGF receptor by insertional mutations in its juxtamembrane regions Oncogene 11 1995 1531 1540
-
(1995)
Oncogene
, vol.11
, pp. 1531-1540
-
-
Sorokin, A.1
-
11
-
-
67649391241
-
The intracellular juxtamembrane domain of the epidermal growth factor (EGF) receptor is responsible for the allosteric regulation of EGF binding
-
J.L. Macdonald-Obermann, and L.J. Pike The intracellular juxtamembrane domain of the epidermal growth factor (EGF) receptor is responsible for the allosteric regulation of EGF binding J. Biol. Chem. 284 2009 13570 13576
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 13570-13576
-
-
MacDonald-Obermann, J.L.1
Pike, L.J.2
-
12
-
-
84865238071
-
Bipartite tetracysteine display reveals allosteric control of ligand-specific EGFR activation
-
R.A. Scheck, M.A. Lowder, J.S. Appelbaum, and A. Schepartz Bipartite tetracysteine display reveals allosteric control of ligand-specific EGFR activation ACS Chem. Biol. 7 2012 1367 1376 http://dx.doi.org/10.1021/cb300216f
-
(2012)
ACS Chem. Biol.
, vol.7
, pp. 1367-1376
-
-
Scheck, R.A.1
Lowder, M.A.2
Appelbaum, J.S.3
Schepartz, A.4
-
13
-
-
37649013040
-
Epidermal growth factor receptor juxtamembrane region regulates allosteric tyrosine kinase activation
-
K.W. Thiel, and G. Carpenter Epidermal growth factor receptor juxtamembrane region regulates allosteric tyrosine kinase activation Proc. Natl. Acad. Sci. U. S. A. 104 2007 19238 19243
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 19238-19243
-
-
Thiel, K.W.1
Carpenter, G.2
-
14
-
-
84856297856
-
Negative co-operativity in the EGF receptor
-
L.J. Pike Negative co-operativity in the EGF receptor Biochem. Soc. Trans. 40 2012 15 19 http://dx.doi.org/10.1042/BST20110610
-
(2012)
Biochem. Soc. Trans.
, vol.40
, pp. 15-19
-
-
Pike, L.J.1
-
15
-
-
84870823045
-
Consequences of replacing EGFR juxtamembrane domain with an unstructured sequence
-
L. He, and K. Hristova Consequences of replacing EGFR juxtamembrane domain with an unstructured sequence Sci. Rep. 2 2012 1 8 http://dx.doi.org/10.1038/srep00854
-
(2012)
Sci. Rep.
, vol.2
, pp. 1-8
-
-
He, L.1
Hristova, K.2
-
16
-
-
79953753353
-
Phosphatidylinositol-4,5-bisphosphate regulates epidermal growth factor receptor activation
-
I.E. Michailidis, R. Rusinova, A. Georgakopoulos, Y. Chen, R. Iyengar, and N.K. Robakis, et al. Phosphatidylinositol-4,5-bisphosphate regulates epidermal growth factor receptor activation Pflugers Arch. - Eur. J. Physiol. 461 2011 387 397
-
(2011)
Pflugers Arch. - Eur. J. Physiol.
, vol.461
, pp. 387-397
-
-
Michailidis, I.E.1
Rusinova, R.2
Georgakopoulos, A.3
Chen, Y.4
Iyengar, R.5
Robakis, N.K.6
-
17
-
-
0036082665
-
PIP(2) and proteins: Interactions, organization, and information flow
-
S. McLaughlin, J. Wang, A. Gambhir, and D. Murray PIP(2) and proteins: interactions, organization, and information flow Annu. Rev. Biophys. Biomol. 31 2002 151 175 http://dx.doi.org/10.1146/annurev.biophys.31.082901.134259
-
(2002)
Annu. Rev. Biophys. Biomol.
, vol.31
, pp. 151-175
-
-
McLaughlin, S.1
Wang, J.2
Gambhir, A.3
Murray, D.4
-
18
-
-
22244449320
-
An electrostatic engine model for autoinhibition and activation of the Epidermal Growth Factor Receptor (EGFR/ErbB) Family
-
S. McLaughlin, S.O. Smith, M.J. Hayman, and D. Murray An electrostatic engine model for autoinhibition and activation of the Epidermal Growth Factor Receptor (EGFR/ErbB) Family J. Gen. Physiol. 126 2005 41 53
-
(2005)
J. Gen. Physiol.
, vol.126
, pp. 41-53
-
-
McLaughlin, S.1
Smith, S.O.2
Hayman, M.J.3
Murray, D.4
-
19
-
-
33750340121
-
Structure of the membrane reconstituted transmembrane-juxtamembrane peptide EGFR(622-660) and its interaction with Ca2 +/calmodulin
-
T. Sato, P. Pallavi, U. Golebiewska, S. McLaughlin, and S.O. Smith Structure of the membrane reconstituted transmembrane-juxtamembrane peptide EGFR(622-660) and its interaction with Ca2 +/calmodulin Biochemistry 45 2006 12704 12714
-
(2006)
Biochemistry
, vol.45
, pp. 12704-12714
-
-
Sato, T.1
Pallavi, P.2
Golebiewska, U.3
McLaughlin, S.4
Smith, S.O.5
-
20
-
-
84873181474
-
Transmembrane helix orientation influences membrane binding of the intracellular juxtamembrane domain in Neu receptor peptides
-
C. Matsushita, H. Tamagaki, Y. Miyazawa, S. Aimoto, S.O. Smith, and T. Sato Transmembrane helix orientation influences membrane binding of the intracellular juxtamembrane domain in Neu receptor peptides Proc. Natl. Acad. Sci. U. S. A. 110 2013 1646 1651 http://dx.doi.org/10.1073/pnas.1215207110
-
(2013)
Proc. Natl. Acad. Sci. U. S. A.
, vol.110
, pp. 1646-1651
-
-
Matsushita, C.1
Tamagaki, H.2
Miyazawa, Y.3
Aimoto, S.4
Smith, S.O.5
Sato, T.6
-
21
-
-
72749123748
-
PIP(2)-binding site in Kir channels: Definition by multiscale biomolecular simulations
-
P.J. Stansfeld, R. Hopkinson, F.M. Ashcroft, and M.S.P. Sansom PIP(2)-binding site in Kir channels: definition by multiscale biomolecular simulations Biochemistry 48 2009 10926 10933 http://dx.doi.org/10.1021/bi9013193
-
(2009)
Biochemistry
, vol.48
, pp. 10926-10933
-
-
Stansfeld, P.J.1
Hopkinson, R.2
Ashcroft, F.M.3
Sansom, M.S.P.4
-
22
-
-
84874298962
-
Identification of cardiolipin binding sites on cytochrome c oxidase at the entrance of proton channels
-
C. Arnarez, S.J. Marrink, and X. Periole Identification of cardiolipin binding sites on cytochrome c oxidase at the entrance of proton channels Sci. Rep. 3 2013 1263 http://dx.doi.org/10.1038/srep01263
-
(2013)
Sci. Rep.
, vol.3
, pp. 1263
-
-
Arnarez, C.1
Marrink, S.J.2
Periole, X.3
-
23
-
-
84873292211
-
Architecture and membrane interactions of the EGF receptor
-
A. Arkhipov, Y. Shan, R. Das, N.F. Endres, M.P. Eastwood, and D.E. Wemmer, et al. Architecture and membrane interactions of the EGF receptor Cell 152 2013 557 569 http://dx.doi.org/10.1016/j.cell.2012.12.030
-
(2013)
Cell
, vol.152
, pp. 557-569
-
-
Arkhipov, A.1
Shan, Y.2
Das, R.3
Endres, N.F.4
Eastwood, M.P.5
Wemmer, D.E.6
-
24
-
-
46249092554
-
GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation
-
B. Hess, C. Kutzner, D. Van Der Spoel, and E. Lindahl GROMACS 4: algorithms for highly efficient, load-balanced, and scalable molecular simulation J. Chem. Theory Comput. 4 2008 435 447 http://dx.doi.org/10.1021/ct700301q
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 435-447
-
-
Hess, B.1
Kutzner, C.2
Van Der Spoel, D.3
Lindahl, E.4
-
25
-
-
27344454932
-
GROMACS: Fast, flexible, and free
-
D. Van Der Spoel, E. Lindahl, B. Hess, G. Groenhof, A.E. Mark, and H.J.C. Berendsen GROMACS: fast, flexible, and free J. Comput. Chem. 26 2005 1701 1718
-
(2005)
J. Comput. Chem.
, vol.26
, pp. 1701-1718
-
-
Van Der Spoel, D.1
Lindahl, E.2
Hess, B.3
Groenhof, G.4
Mark, A.E.5
Berendsen, H.J.C.6
-
26
-
-
48849113878
-
Comparative protein structure modeling using MODELLER
-
Unit 2.9
-
N. Eswar, B. Webb, M.A. Marti-Renom, M.S. Madhusudhan, D. Eramian, and M.-Y. Shen, et al. Comparative protein structure modeling using MODELLER Curr. Protoc. Protein Sci. 2007 http://dx.doi.org/10.1002/0471140864.ps0209s50 (Unit 2.9)
-
(2007)
Curr. Protoc. Protein Sci.
-
-
Eswar, N.1
Webb, B.2
Marti-Renom, M.A.3
Madhusudhan, M.S.4
Eramian, D.5
Shen, M.-Y.6
-
27
-
-
49449113010
-
The MARTINI coarse-grained force field: Extension to proteins
-
L. Monticelli, S.K. Kandasamy, X. Periole, R.G. Larson, D.P. Tieleman, and S.-J. Marrink The MARTINI coarse-grained force field: extension to proteins J. Chem. Theory Comput. 4 2008 819 834 http://dx.doi.org/10.1021/ct700324x
-
(2008)
J. Chem. Theory Comput.
, vol.4
, pp. 819-834
-
-
Monticelli, L.1
Kandasamy, S.K.2
Periole, X.3
Larson, R.G.4
Tieleman, D.P.5
Marrink, S.-J.6
-
28
-
-
34547474332
-
The MARTINI force field: Coarse grained model for biomolecular simulations
-
S.J. Marrink, H.J. Risselada, S. Yefimov, D.P. Tieleman, and A.H. de Vries The MARTINI force field: coarse grained model for biomolecular simulations J. Phys. Chem. B 111 2007 7812 7824 http://dx.doi.org/10.1021/jp071097f
-
(2007)
J. Phys. Chem. B
, vol.111
, pp. 7812-7824
-
-
Marrink, S.J.1
Risselada, H.J.2
Yefimov, S.3
Tieleman, D.P.4
De Vries, A.H.5
-
29
-
-
0035132230
-
Anisotropy of fluctuation dynamics of proteins with an elastic network model
-
A.R. Atilgan, S.R. Durell, R.L. Jernigan, M.C. Demirel, O. Keskin, and I. Bahar Anisotropy of fluctuation dynamics of proteins with an elastic network model Biophys. J. 80 2001 505 515 http://dx.doi.org/10.1016/S0006-3495(01)76033-X
-
(2001)
Biophys. J.
, vol.80
, pp. 505-515
-
-
Atilgan, A.R.1
Durell, S.R.2
Jernigan, R.L.3
Demirel, M.C.4
Keskin, O.5
Bahar, I.6
-
30
-
-
84908326414
-
Lipid clustering correlates with membrane curvature as revealed by molecular simulations of complex lipid bilayers
-
submitted for publication
-
H. Koldsø, D. Shorthouse, J. Helie, and M.S.P. Sansom Lipid clustering correlates with membrane curvature as revealed by molecular simulations of complex lipid bilayers PLoS Comput. Biol. 2014 (submitted for publication)
-
(2014)
PLoS Comput. Biol.
-
-
Koldsø, H.1
Shorthouse, D.2
Helie, J.3
Sansom, M.S.P.4
-
31
-
-
79954524314
-
From coarse grained to atomistic: A serial multiscale approach to membrane protein simulations
-
P.J. Stansfeld, and M.S.P. Sansom From coarse grained to atomistic: a serial multiscale approach to membrane protein simulations J. Chem. Theory Comput. 7 2011 1157 1166 http://dx.doi.org/10.1021/ct100569y
-
(2011)
J. Chem. Theory Comput.
, vol.7
, pp. 1157-1166
-
-
Stansfeld, P.J.1
Sansom, M.S.P.2
-
32
-
-
0008819754
-
The GROMOS biomolecular simulation program package
-
W.R.P. Scott, P.H. Hünenberger, I.G. Tironi, A.E. Mark, S.R. Billeter, and J. Fennen, et al. The GROMOS biomolecular simulation program package J. Phys. Chem. A 103 1999 3596 3607 10.1021/jp984217f
-
(1999)
J. Phys. Chem. A
, vol.103
, pp. 3596-3607
-
-
Scott, W.R.P.1
Hünenberger, P.H.2
Tironi, I.G.3
Mark, A.E.4
Billeter, S.R.5
Fennen, J.6
-
33
-
-
0000388705
-
LINCS: A linear constraint solver for molecular simulations
-
B. Hess, H. Bekker, H.J.C. Berendsen, and J.G.E.M. Fraaije LINCS: a linear constraint solver for molecular simulations J. Comput. Chem. 18 1997 1463 1472 http://dx.doi.org/10.1002/(SICI)1096-987X(199709)18:12<1463::AID-JCC4>3.3.CO;2-L
-
(1997)
J. Comput. Chem.
, vol.18
, pp. 1463-1472
-
-
Hess, B.1
Bekker, H.2
Berendsen, H.J.C.3
Fraaije, J.G.E.M.4
-
34
-
-
33846823909
-
Particle mesh Ewald: An N(N) method for Ewald sums in large systems
-
T. Darden, D. York, and L. Pedersen Particle mesh Ewald: an N(N) method for Ewald sums in large systems J. Chem. Phys. 98 1993 10089 10092
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 10089-10092
-
-
Darden, T.1
York, D.2
Pedersen, L.3
-
35
-
-
33846086933
-
Canonical sampling through velocity rescaling
-
G. Bussi, D. Donadio, and M. Parrinello Canonical sampling through velocity rescaling J. Chem. Phys. 126 2007 014101
-
(2007)
J. Chem. Phys.
, vol.126
, pp. 014101
-
-
Bussi, G.1
Donadio, D.2
Parrinello, M.3
-
36
-
-
0019707626
-
Polymorphic transitions in single crystals: A new molecular dynamics method
-
M. Parrinello, and A. Rahman Polymorphic transitions in single crystals: a new molecular dynamics method J. Appl. Phys. 52 1981 7182 7190 http://dx.doi.org/10.1063/1.328693
-
(1981)
J. Appl. Phys.
, vol.52
, pp. 7182-7190
-
-
Parrinello, M.1
Rahman, A.2
-
38
-
-
84900524866
-
Sidekick for membrane simulations: Automated ensemble molecular dynamics simulations of transmembrane helices
-
B.A. Hall, K.B.A. Halim, A. Buyan, B. Emmanouil, and M.S.P. Sansom Sidekick for membrane simulations: automated ensemble molecular dynamics simulations of transmembrane helices J. Chem. Theory Comput. 10 2014 2165 2175
-
(2014)
J. Chem. Theory Comput.
, vol.10
, pp. 2165-2175
-
-
Hall, B.A.1
Halim, K.B.A.2
Buyan, A.3
Emmanouil, B.4
Sansom, M.S.P.5
-
39
-
-
84874599376
-
Evidence for cardiolipin binding sites on the membrane-exposed surface of the cytochrome bc1
-
C. Arnarez, J.P. Mazat, J. Elezgaray, S.J. Marrink, and X. Periole Evidence for cardiolipin binding sites on the membrane-exposed surface of the cytochrome bc1 J. Am. Chem. Soc. 135 2013 3112 3120
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 3112-3120
-
-
Arnarez, C.1
Mazat, J.P.2
Elezgaray, J.3
Marrink, S.J.4
Periole, X.5
-
40
-
-
84870830305
-
Local lipid reorganization by a transmembrane protein domain
-
H. Koldsø, and M.S.P. Sansom Local lipid reorganization by a transmembrane protein domain J. Phys. Chem. Lett. 3 2012 3498 3502 http://dx.doi.org/10.1021/jz301570w
-
(2012)
J. Phys. Chem. Lett.
, vol.3
, pp. 3498-3502
-
-
Koldsø, H.1
Sansom, M.S.P.2
|