Phylogenetic endemism in terrestrial mammals

Global Ecology and Biogeography

Volumn 24, Issue 2, 2015, Pages 168-179

  Rosauer, Dan F ^a,b   Jetz, Walter ^a,c  

^a YALE UNIVERSITY   (United States)

^b AUSTRALIAN NATIONAL UNIVERSITY   (Australia)

^c IMPERIAL COLLEGE LONDON   (United Kingdom)

Author keywords

Endemism; GLM models; Isolation; Mammals; Phylogenetic diversity; Phylogenetic endemism; SAR models

Indexed keywords

BIODIVERSITY; ENDEMISM; EVOLUTIONARY BIOLOGY; LAST GLACIAL MAXIMUM; MAMMAL; PHYLOGENETICS;

MAMMALIA;

EID: 84922646532     PISSN: 1466822X     EISSN: 14668238     Source Type: Journal    
DOI: 10.1111/geb.12237     Document Type: Article

References (55)

1. Allen, A.P., Gillooly, J.F. & Brown, J.H. (2007) Recasting the species-energy hypothesis: the different roles of kinetic and potential energy in regulating biodiversity. Scaling biodiversity (ed. by D. Storch, P.A. Marquet and J.H. Brown ), pp. 283-299. Cambridge University Press, Cambridge.
2. Belmaker, J. & Jetz, W. (2011) Cross-scale variation in species richness-environment associations. Global Ecology and Biogeography, 20, 464-474.
3. Bininda-Emonds, O.R.P., Cardillo, M., Jones, K.E., MacPhee, R.D.E., Beck, R.M.D., Grenyer, R., Price, S.A., Vos, R.A., Gittleman, J.L. & Purvis, A. (2007) The delayed rise of present-day mammals. Nature, 446, 507-512.
4. Bivand, R. (2011) spdep (R package): spdep: Spatial dependence: weighting schemes, statistics and models. R package version 0.5-37. http://CRAN.R-project.org/package=spdep.
5. Bonn, A., Storch, D. & Gaston, K.J. (2004) Structure of the species-energy relationship. Proceedings of the Royal Society B: Biological Sciences, 271, 1685-1691.
6. Braconnot, P., Otto-Bliesner, B., Harrison, S. etal. (2007) Results of PMIP2 coupled simulations of the mid-Holocene and Last Glacial Maximum - part 1: experiments and large-scale features. Climate of the Past, 3, 261-277.
7. Cadotte, M.W. (2013) Experimental evidence that evolutionarily diverse assemblages result in higher productivity. Proceedings of the National Academy of Sciences USA, 110, 8996-9000.
8. Cadotte, M.W. & Davies, J.T. (2010) Rarest of the rare: advances in combining evolutionary distinctiveness and scarcity to inform conservation at biogeographical scales. Diversity and Distributions, 16, 376-385.
9. Carnaval, A.C. & Moritz, C. (2008) Historical climate modelling predicts patterns of current biodiversity in the Brazilian Atlantic forest. Journal of Biogeography, 35, 1187-1201.
10. Carnaval, A.C., Hickerson, M.J., Haddad, C.F.B., Rodrigues, M.T. & Moritz, C. (2009) Stability predicts genetic diversity in the Brazilian Atlantic forest hotspot. Science, 323, 785-789.
11. Ceballos, G. & Ehrlich, P.R. (2006) Global mammal distributions, biodiversity hotspots, and conservation. Proceedings of the National Academy of Sciences USA, 103, 19374-19379.
12. Collen, B., Turvey, S.T., Waterman, C., Meredith, H.M.R., Kuhn, T.S., Baillie, J.E.M. & Isaac, N.J.B. (2011) Investing in evolutionary history: implementing a phylogenetic approach for mammal conservation. Philosophical Transactions of the Royal Society B: Biological Sciences, 366, 2611-2622.
13. Crisp, M., Laffan, S., Linder, H. & Monro, A. (2001) Endemism in the Australian flora. Journal of Biogeography, 28, 183-198.
14. Davies, T.J. & Buckley, L.B. (2011) Phylogenetic diversity as a window into the evolutionary and biogeographic histories of present-day richness gradients for mammals. Philosophical Transactions of the Royal Society B: Biological Sciences, 366, 2414-2425.
15. Davies, T.J., Purvis, A. & Gittleman, J.L. (2009) Quaternary climate change and the geographic ranges of mammals. The American Naturalist, 174, 297-307.
16. Evans, K.L., Warren, P.H. & Gaston, K.J. (2005) Species-energy relationships at the macroecological scale: a review of the mechanisms. Biological Reviews, 80, 1-25.
17. Faith, D.P. (1992) Conservation evaluation and phylogenetic diversity. Biological Conservation, 61, 1-10.
18. Faith, D.P., Reid, C.A.M. & Hunter, J. (2004) Integrating phylogenetic diversity, complementarity, and endemism for conservation assessment. Conservation Biology, 18, 255-261.
19. Fjeldsa, J. & Lovett, J.C. (1997) Geographical patterns of old and young species in African forest biota: the significance of specific montane areas as evolutionary centres. Biodiversity and Conservation, 6, 325-346.
20. Fjeldsa, J., Lambin, E. & Mertens, B. (1999) Correlation between endemism and local ecoclimatic stability documented by comparing Andean bird distributions and remotely sensed land surface data. Ecography, 22, 63-78.
21. Fritz, S.A., Bininda-Emonds, O.R.P. & Purvis, A. (2009) Geographical variation in predictors of mammalian extinction risk: big is bad, but only in the tropics. Ecology Letters, 12, 538-549.
22. Gillespie, R.G. & Roderick, G.K. (2002) Arthropods on islands: colonization, speciation, and conservation. Annual Review of Entomology, 47, 595-632.
23. Gudde, R.M., Joy, J.B. & Mooers, A.O. (2013) Imperilled phylogenetic endemism of Malagasy lemuriformes. Diversity and Distributions, 19, 664-675.
24. Hoorn, C., Wesselingh, F.P., ter Steege, H., Bermudez, M.A., Mora, A., Sevink, J., Sanmartín, I., Sanchez-Meseguer, A., Anderson, C.L., Figueiredo, J.P., Jaramillo, C., Riff, D., Negri, F.R., Hooghiemstra, H., Lundberg, J., Stadler, T., Särkinen, T. & Antonelli, A. (2010) Amazonia through time: Andean uplift, climate change, landscape evolution, and biodiversity. Science, 330, 927-931.
25. Huang, S., Stephens, P.R. & Gittleman, J.L. (2012) Traits, trees and taxa: global dimensions of biodiversity in mammals. Proceedings of the Royal Society B: Biological Sciences, 279, 4997-5003.
26. Hughes, C. & Eastwood, R. (2006) Island radiation on a continental scale: exceptional rates of plant diversification after uplift of the Andes. Proceedings of the National Academy of Sciences USA, 103, 10334-10339.
27. Hurlbert, A.H. & Jetz, W. (2007) Species richness, hotspots, and the scale dependence of range maps in ecology and conservation. Proceedings of the National Academy of Sciences USA, 104, 13384-13389.
28. IUCN (2010) IUCN Red List of threatened species - mammal range polygons. Available at: http://www.iucnredlist.org (accessed May 2011).
29. Jansson, R. (2003) Global patterns in endemism explained by past climatic change. Proceedings of the Royal Society B: Biological Sciences, 270, 583-590.
30. Jetz, W., Rahbek, C. & Colwell, R.K. (2004) The coincidence of rarity and richness and the potential signature of history in centres of endemism. Ecology Letters, 7, 1180-1191.
31. Jetz, W., McPherson, J.M. & Guralnick, R.P. (2012) Integrating biodiversity distribution knowledge: toward a global map of life. Trends in Ecology and Evolution, 27, 151-159.
32. Jetz, W., Thomas, Gavin H., Joy, Jeffrey B., Redding, David W., Hartmann, K. & Mooers, Arne O. (2014) Global Distribution and Conservation of Evolutionary Distinctness in Birds. Current Biology, 24, 919-930.
33. Kier, G., Kreft, H., Lee, T.M., Jetz, W., Ibisch, P.L., Nowicki, C., Mutke, J. & Barthlott, W. (2009) A global assessment of endemism and species richness across island and mainland regions. Proceedings of the National Academy of Sciences USA, 106, 9322-9327.
34. Kuhn, T.S., Mooers, A. & Thomas, G.H. (2011) A simple polytomy resolver for dated phylogenies. Methods in Ecology and Evolution, 2, 427-436.
35. Loarie, S.R., Duffy, P.B., Hamilton, H., Asner, G.P., Field, C.B. & Ackerly, D.D. (2009) The velocity of climate change. Nature, 462, 1052-1055.
36. Lyons, S.K. (2003) A quantitative assessment of the range shifts of Pleistocene mammals. Journal of Mammalogy, 84, 385-402.
37. Mace, G.M., Gittleman, J.L. & Purvis, A. (2003) Preserving the tree of life. Science, 300, 1707-1709.
38. Myers, N., Mittermeier, R.A., Mittermeier, C.G., Da Fonseca, G.A.B. & Kent, J. (2000) Biodiversity hotspots for conservation priorities. Nature, 403, 853-858.
39. Peltier, W.R. (2004) Global glacial isostasy and the surface of the ice-age earth: the ice-5G (VM2) model and grace. Annual Review of Earth and Planetary Sciences, 32, 111-149.
40. R Development Core Team (2011) R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
41. Rangel, T.F., Diniz-Filho, J.A.F. & Bini, L.M. (2010) SAM: a comprehensive application for spatial analysis in macroecology. Ecography, 33, 46-50.
42. Redding, D.W. & Mooers, A.O. (2006) Incorporating evolutionary measures into conservation prioritization. Conservation Biology, 20, 1670-1678.
43. Ribas, C.C., Aleixo, A., Nogueira, A.C.R., Miyaki, C.Y. & Cracraft, J. (2012) A palaeobiogeographic model for biotic diversification within Amazonia over the past three million years. Proceedings of the Royal Society B: Biological Sciences, 279, 681-689.
44. Rosauer, D., Laffan, S.W., Crisp, M.D., Donnellan, S.C. & Cook, L.G. (2009) Phylogenetic endemism: a new approach for identifying geographical concentrations of evolutionary history. Molecular Ecology, 18, 4061-4072.
45. Rosauer, D.F. & Mooers, A.O. (2013) Nurturing the use of evolutionary diversity in nature conservation. Trends in Ecology and Evolution, 28, 322-323.
46. Safi, K., Cianciaruso, M.V., Loyola, R.D., Brito, D., Armour-Marshall, K. & Diniz, J.A.F. (2011) Understanding global patterns of mammalian functional and phylogenetic diversity. Philosophical Transactions of the Royal Society B: Biological Sciences, 366, 2536-2544.
47. Sandel, B., Arge, L., Dalsgaard, B., Davies, R.G., Gaston, K.J., Sutherland, W.J. & Svenning, J.C. (2011) The influence of late Quaternary climate-change velocity on species endemism. Science, 334, 660-664.
48. Sechrest, W., Brooks, T.M., Da Fonseca, G.A.B., Konstant, W.R., Mittermeier, R.A., Purvis, A., Rylands, A.B. & Gittleman, J.L. (2002) Hotspots and the conservation of evolutionary history. Proceedings of the National Academy of Sciences USA, 99, 2067-2071.
49. Slatyer, C., Rosauer, D. & Lemckert, F. (2007) An assessment of endemism and species richness patterns in the Australian Anura. Journal of Biogeography, 34, 583-596.
50. Soutullo, A., Dodsworth, S., Heard, S.B. & Mooers, A.O. (2005) Distribution and correlates of carnivore phylogenetic diversity across the Americas. Animal Conservation, 8, 249-258.
51. Stebbins, G.L. & Major, J. (1965) Endemism and speciation in California flora. Ecological Monographs, 35, 1-35.
52. Thomas, G.H. (2008) Phylogenetic distributions of British birds of conservation concern. Proceedings of the Royal Society B: Biological Sciences, 275, 2077-2083.
53. Wallace, A.R. (1876) Geographical distribution of animals: with a study of the relations of living and extinct faunas as elucidating the past changes of the earth's surface. Macmillan, London.
54. Weir, J.T. & Price, M. (2011) Andean uplift promotes lowland speciation through vicariance and dispersal in Dendrocincla woodcreepers. Molecular Ecology, 20, 4550-4563.
55. Wilting, A., Sollmann, R., Meijaard, E., Helgen, K.M. & Fickel, J. (2012) Mentawai's endemic, relictual fauna: is it evidence for Pleistocene extinctions on Sumatra? Journal of Biogeography, 39, 1608-1620.