-
1
-
-
33847680027
-
Diversity of arsenite transporter genes from arsenic-resistant soil bacteria
-
Achour, A.R., Bauda, P., and Billard, P. (2007) Diversity of arsenite transporter genes from arsenic-resistant soil bacteria. Res Microbiol 158: 128-137.
-
(2007)
Res Microbiol
, vol.158
, pp. 128-137
-
-
Achour, A.R.1
Bauda, P.2
Billard, P.3
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W., and Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
79960943453
-
Multilevel populations and the evolution of antibiotic resistance through horizontal gene transfer
-
Andam, C.P., Fournier, G.P., and Gogarten, J.P. (2011) Multilevel populations and the evolution of antibiotic resistance through horizontal gene transfer. FEMS Microbiol Rev 35: 756-767.
-
(2011)
FEMS Microbiol Rev
, vol.35
, pp. 756-767
-
-
Andam, C.P.1
Fournier, G.P.2
Gogarten, J.P.3
-
4
-
-
0031734733
-
A chromosomal ars operon homologue of Pseudomonas aeruginosa confers increased resistance to arsenic and antimony in Escherichia coli
-
Cai, J., Salmon, K., and DuBow, M.S. (1998) A chromosomal ars operon homologue of Pseudomonas aeruginosa confers increased resistance to arsenic and antimony in Escherichia coli. Microbiology 144: 2705-2713.
-
(1998)
Microbiology
, vol.144
, pp. 2705-2713
-
-
Cai, J.1
Salmon, K.2
DuBow, M.S.3
-
5
-
-
0347567163
-
Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis
-
Canovas, D., Cases, I., and de Lorenzo, V. (2003a) Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis. Environ Microbiol 5: 1242-1256.
-
(2003)
Environ Microbiol
, vol.5
, pp. 1242-1256
-
-
Canovas, D.1
Cases, I.2
de Lorenzo, V.3
-
6
-
-
0242676224
-
Arsenate transport and reduction in the hyper-tolerant fungus Aspergillus sp. P37
-
Canovas, D., Mukhopadhyay, R., Rosen, B.P., and de Lorenzo, V. (2003b) Arsenate transport and reduction in the hyper-tolerant fungus Aspergillus sp. P37. Environ Microbiol 5: 1087-1093.
-
(2003)
Environ Microbiol
, vol.5
, pp. 1087-1093
-
-
Canovas, D.1
Mukhopadhyay, R.2
Rosen, B.P.3
de Lorenzo, V.4
-
7
-
-
10944246552
-
The role of thiol species in the hypertolerance of Aspergillus sp. P37 to arsenic
-
Canovas, D., Vooijs, R., Schat, H., and de Lorenzo, V. (2004) The role of thiol species in the hypertolerance of Aspergillus sp. P37 to arsenic. J Biol Chem 279: 51234-51240.
-
(2004)
J Biol Chem
, vol.279
, pp. 51234-51240
-
-
Canovas, D.1
Vooijs, R.2
Schat, H.3
de Lorenzo, V.4
-
8
-
-
0028837094
-
The ars operon of Escherichia coli confers arsenical and antimonial resistance
-
Carlin, A., Shi, W., Dey, S., and Rosen, B.P. (1995) The ars operon of Escherichia coli confers arsenical and antimonial resistance. J Bacteriol 177: 981-986.
-
(1995)
J Bacteriol
, vol.177
, pp. 981-986
-
-
Carlin, A.1
Shi, W.2
Dey, S.3
Rosen, B.P.4
-
9
-
-
20044369186
-
An adaptive radiation model for the origin of new gene functions
-
Francino, M.P. (2005) An adaptive radiation model for the origin of new gene functions. Nat Genet 37: 573-577.
-
(2005)
Nat Genet
, vol.37
, pp. 573-577
-
-
Francino, M.P.1
-
10
-
-
13544273854
-
Adaptation of the yeast URA3 selection system to gram-negative bacteria and generation of a ΔbetCDE Pseudomonas putida strain
-
Galvao, T.C., and de Lorenzo, V. (2005) Adaptation of the yeast URA3 selection system to gram-negative bacteria and generation of a ΔbetCDE Pseudomonas putida strain. Appl Environ Microbiol 71: 883-892.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 883-892
-
-
Galvao, T.C.1
de Lorenzo, V.2
-
11
-
-
0032171231
-
Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review
-
Giller, K.E., Witter, E., and McGrath, S.P. (1998) Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol Biochem 30: 1389-1414.
-
(1998)
Soil Biol Biochem
, vol.30
, pp. 1389-1414
-
-
Giller, K.E.1
Witter, E.2
McGrath, S.P.3
-
12
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall, A.H. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-98.
-
(1999)
Nucleic Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, A.H.1
-
13
-
-
0020959710
-
Studies on transformation of Escherichia coli with plasmids
-
Hanahan, D. (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166: 557-580.
-
(1983)
J Mol Biol
, vol.166
, pp. 557-580
-
-
Hanahan, D.1
-
14
-
-
0025047590
-
Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria
-
Herrero, M., de Lorenzo, V., and Timmis, K.N. (1990) Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria. J Bacteriol 172: 6557-6567.
-
(1990)
J Bacteriol
, vol.172
, pp. 6557-6567
-
-
Herrero, M.1
de Lorenzo, V.2
Timmis, K.N.3
-
15
-
-
0037031594
-
An RNA thermosensor controls expression of virulence genes in Listeria monocytogenes
-
Johansson, J., Mandin, P., Renzoni, A., Chiaruttini, C., Springer, M., and Cossart, P. (2002) An RNA thermosensor controls expression of virulence genes in Listeria monocytogenes. Cell 110: 551-561.
-
(2002)
Cell
, vol.110
, pp. 551-561
-
-
Johansson, J.1
Mandin, P.2
Renzoni, A.3
Chiaruttini, C.4
Springer, M.5
Cossart, P.6
-
16
-
-
0026780837
-
A general system to integrate lacZ fusions into the chromosomes of Gram-negative Eubacteria: regulation of the Pm promoter of the TOL plasmid studied with all controlling elements in monocopy
-
Kessler, B., de Lorenzo, V., and Timmis, K.N. (1992) A general system to integrate lacZ fusions into the chromosomes of Gram-negative Eubacteria: regulation of the Pm promoter of the TOL plasmid studied with all controlling elements in monocopy. Mol Gen Genet 233: 293-301.
-
(1992)
Mol Gen Genet
, vol.233
, pp. 293-301
-
-
Kessler, B.1
de Lorenzo, V.2
Timmis, K.N.3
-
17
-
-
0028084932
-
Regulation of the rpoN, ORF102 and ORF154 genes in Pseudomonas putida
-
Kohler, T., Alvarez, J.F., and Harayama, S. (1994) Regulation of the rpoN, ORF102 and ORF154 genes in Pseudomonas putida. FEMS Microbiol Lett 115: 177-184.
-
(1994)
FEMS Microbiol Lett
, vol.115
, pp. 177-184
-
-
Kohler, T.1
Alvarez, J.F.2
Harayama, S.3
-
19
-
-
0000632797
-
TnphoA: a transposon probe for protein export signals
-
Manoil, C., and Beckwith, J. (1985) TnphoA: a transposon probe for protein export signals. Proc Natl Acad Sci USA 82: 8129-8133.
-
(1985)
Proc Natl Acad Sci USA
, vol.82
, pp. 8129-8133
-
-
Manoil, C.1
Beckwith, J.2
-
20
-
-
33750593998
-
Corynebacterium glutamicum as a model bacterium for the bioremediation of arsenic
-
Mateos, L.M., Ordonez, E., Letek, M., and Gil, J.A. (2006) Corynebacterium glutamicum as a model bacterium for the bioremediation of arsenic. Int Microbiol 9: 207-215.
-
(2006)
Int Microbiol
, vol.9
, pp. 207-215
-
-
Mateos, L.M.1
Ordonez, E.2
Letek, M.3
Gil, J.A.4
-
21
-
-
33747357184
-
Arsenate reduction: thiol cascade chemistry with convergent evolution
-
Messens, J., and Silver, S. (2006) Arsenate reduction: thiol cascade chemistry with convergent evolution. J Mol Biol 362: 1-17.
-
(2006)
J Mol Biol
, vol.362
, pp. 1-17
-
-
Messens, J.1
Silver, S.2
-
23
-
-
0036024582
-
Microbial arsenic: from geocycles to genes and enzymes
-
Mukhopadhyay, R., Rosen, B.P., Phung, L.T., and Silver, S. (2002) Microbial arsenic: from geocycles to genes and enzymes. FEMS Microbiol Rev 26: 311-325.
-
(2002)
FEMS Microbiol Rev
, vol.26
, pp. 311-325
-
-
Mukhopadhyay, R.1
Rosen, B.P.2
Phung, L.T.3
Silver, S.4
-
24
-
-
0036933705
-
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
-
Nelson, K.E., Weinel, C., Paulsen, I.T., Dodson, R.J., Hilbert, H., Martins dos Santos, V.A., etal. (2002) Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440. Environ Microbiol 4: 799-808.
-
(2002)
Environ Microbiol
, vol.4
, pp. 799-808
-
-
Nelson, K.E.1
Weinel, C.2
Paulsen, I.T.3
Dodson, R.J.4
Hilbert, H.5
Martins dos Santos, V.A.6
-
25
-
-
84898874640
-
Biotechnological domestication of Pseudomonads using synthetic biology
-
Nikel, P.I., Martínez-García, E., and de Lorenzo, V. (2014) Biotechnological domestication of Pseudomonads using synthetic biology. Nat Microbiol Rev 12: 368-379.
-
(2014)
Nat Microbiol Rev
, vol.12
, pp. 368-379
-
-
Nikel, P.I.1
Martínez-García, E.2
de Lorenzo, V.3
-
26
-
-
0037656045
-
The ecology of arsenic
-
Oremland, R.S., and Stolz, J.F. (2003) The ecology of arsenic. Science 300: 939-944.
-
(2003)
Science
, vol.300
, pp. 939-944
-
-
Oremland, R.S.1
Stolz, J.F.2
-
27
-
-
59449096974
-
Microbial responses to environmental arsenic
-
Paez-Espino, D., Tamames, J., de Lorenzo, V., and Canovas, D. (2009) Microbial responses to environmental arsenic. Biometals 22: 117-130.
-
(2009)
Biometals
, vol.22
, pp. 117-130
-
-
Paez-Espino, D.1
Tamames, J.2
de Lorenzo, V.3
Canovas, D.4
-
28
-
-
0029554288
-
Resistance mechanisms to arsenicals and antimonials
-
Rosen, B.P. (1995) Resistance mechanisms to arsenicals and antimonials. J Basic Clin Physiol Pharmacol 6: 251-263.
-
(1995)
J Basic Clin Physiol Pharmacol
, vol.6
, pp. 251-263
-
-
Rosen, B.P.1
-
29
-
-
0003903343
-
-
New York, NY, USA: Cold Spring Harbor Laboratory Press.
-
Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual. New York, NY, USA: Cold Spring Harbor Laboratory Press.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
30
-
-
41149134242
-
Adapting to environmental changes using specialized paralogs
-
Sanchez-Perez, G., Mira, A., Nyiro, G., Pasic, L., and Rodriguez-Valera, F. (2008) Adapting to environmental changes using specialized paralogs. Trends Genet 24: 154-158.
-
(2008)
Trends Genet
, vol.24
, pp. 154-158
-
-
Sanchez-Perez, G.1
Mira, A.2
Nyiro, G.3
Pasic, L.4
Rodriguez-Valera, F.5
-
31
-
-
0023650543
-
The Codon Adaptation Index - a measure of directional synonymous codon usage bias, and its potential applications
-
Sharp, P.M., and Li, W.H. (1987) The Codon Adaptation Index - a measure of directional synonymous codon usage bias, and its potential applications. Nucleic Acids Res 15: 1281-1295.
-
(1987)
Nucleic Acids Res
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
32
-
-
84876567509
-
The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes
-
Silva-Rocha, R., Martinez-Garcia, E., Calles, B., Chavarria, M., Arce-Rodriguez, A., de Las Heras, A., etal. (2013) The Standard European Vector Architecture (SEVA): a coherent platform for the analysis and deployment of complex prokaryotic phenotypes. Nucleic Acids Res 41: D666-D675.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D666-D675
-
-
Silva-Rocha, R.1
Martinez-Garcia, E.2
Calles, B.3
Chavarria, M.4
Arce-Rodriguez, A.5
de Las Heras, A.6
-
33
-
-
0026510963
-
Environmental biochemistry of arsenic
-
In Ware, G. (ed.). New York, NY, USA: Springer
-
Tamaki, S., and Frankenberger, W.T., Jr (1992) Environmental biochemistry of arsenic. In Reviews of Environmental Contamination and Toxicology. Ware, G. (ed.). New York, NY, USA: Springer, pp. 79-110.
-
(1992)
Reviews of Environmental Contamination and Toxicology
, pp. 79-110
-
-
Tamaki, S.1
Frankenberger, W.T.2
-
34
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
35
-
-
0020714456
-
Rapid similarity searches of nucleic acid and protein data banks
-
Wilbur, W.J., and Lipman, D.J. (1983) Rapid similarity searches of nucleic acid and protein data banks. Proc Natl Acad Sci USA 80: 726-730.
-
(1983)
Proc Natl Acad Sci USA
, vol.80
, pp. 726-730
-
-
Wilbur, W.J.1
Lipman, D.J.2
-
36
-
-
0027535743
-
Metalloregulated expression of the ars operon
-
Wu, J., and Rosen, B.P. (1993) Metalloregulated expression of the ars operon. J Biol Chem 268: 52-58.
-
(1993)
J Biol Chem
, vol.268
, pp. 52-58
-
-
Wu, J.1
Rosen, B.P.2
-
37
-
-
0031891809
-
Metalloid resistance mechanisms in prokaryotes
-
Xu, C., Zhou, T., Kuroda, M., and Rosen, B.P. (1998) Metalloid resistance mechanisms in prokaryotes. J Biochem 123: 16-23.
-
(1998)
J Biochem
, vol.123
, pp. 16-23
-
-
Xu, C.1
Zhou, T.2
Kuroda, M.3
Rosen, B.P.4
-
38
-
-
33644952730
-
Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray
-
Yuste, L., Hervas, A.B., Canosa, I., Tobes, R., Jimenez, J.I., Nogales, J., etal. (2006) Growth phase-dependent expression of the Pseudomonas putida KT2440 transcriptional machinery analysed with a genome-wide DNA microarray. Environ Microbiol 8: 165-177.
-
(2006)
Environ Microbiol
, vol.8
, pp. 165-177
-
-
Yuste, L.1
Hervas, A.B.2
Canosa, I.3
Tobes, R.4
Jimenez, J.I.5
Nogales, J.6
-
39
-
-
79951933331
-
Monitoring biodegradative enzymes with nanobodies raised in Camelus dromedarius with mixtures of catabolic proteins
-
Zafra, O., Fraile, S., Gutierrez, C., Haro, A., Paez-Espino, A.D., Jimenez, J.I., and de Lorenzo, V. (2011) Monitoring biodegradative enzymes with nanobodies raised in Camelus dromedarius with mixtures of catabolic proteins. Environ Microbiol 13: 960-974.
-
(2011)
Environ Microbiol
, vol.13
, pp. 960-974
-
-
Zafra, O.1
Fraile, S.2
Gutierrez, C.3
Haro, A.4
Paez-Espino, A.D.5
Jimenez, J.I.6
de Lorenzo, V.7
|