메뉴 건너뛰기




Volumn 49, Issue 2, 2015, Pages 1095-1104

Prevalence of antibiotic resistance genes and bacterial pathogens in long-term manured greenhouse soils as revealed by metagenomic survey

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTICS; BACTERIA; BACTERIOLOGY; BIOMARKERS; ECOLOGY; FERTILIZERS; GENES; HEALTH RISKS; MANURES; SOILS; SULFUR COMPOUNDS;

EID: 84921803438     PISSN: 0013936X     EISSN: 15205851     Source Type: Journal    
DOI: 10.1021/es504157v     Document Type: Article
Times cited : (306)

References (36)
  • 2
    • 79952688990 scopus 로고    scopus 로고
    • The comparison on economic values of ecosystem services for greenhouse agriculture of different climatic regions in China: Two case studies from northern China and the middle and lower reaches of Yangtze River
    • Liu, A. Q.; Wang, Y.; Xu, B.; Yang, W.; Ge, Y.; Wu, X.; Peng, C. H.; Chang, J. The comparison on economic values of ecosystem services for greenhouse agriculture of different climatic regions in China: two case studies from northern China and the middle and lower reaches of Yangtze River. Acta Ecol. Sin. 2010, 30 (20), 5677-5686.
    • (2010) Acta Ecol. Sin. , vol.30 , Issue.20 , pp. 5677-5686
    • Liu, A.Q.1    Wang, Y.2    Xu, B.3    Yang, W.4    Ge, Y.5    Wu, X.6    Peng, C.H.7    Chang, J.8
  • 3
    • 84877103643 scopus 로고    scopus 로고
    • Influence of planting patterns on fluoroquinolone residues in the soil of an intensive vegetable cultivation area in northern China
    • Li, X. W.; Xie, Y. F.; Wang, J. F.; Christakos, G.; Si, J. L.; Zhao, H. N.; Ding, Y. Q.; Li, J. Influence of planting patterns on fluoroquinolone residues in the soil of an intensive vegetable cultivation area in northern China. Sci. Total Environ. 2013, 458, 63-69.
    • (2013) Sci. Total Environ. , vol.458 , pp. 63-69
    • Li, X.W.1    Xie, Y.F.2    Wang, J.F.3    Christakos, G.4    Si, J.L.5    Zhao, H.N.6    Ding, Y.Q.7    Li, J.8
  • 4
    • 84887957738 scopus 로고    scopus 로고
    • Fate and transport of antimicrobials and antimicrobial resistance genes in soil and runoff following land application of swine manure slurry
    • Joy, S. R.; Bartelt-Hunt, S. L.; Snow, D. D.; Gilley, J. E.; Woodbury, B. L.; Parker, D. B.; Marx, D. B.; Li, X. Fate and transport of antimicrobials and antimicrobial resistance genes in soil and runoff following land application of swine manure slurry. Environ. Sci. Technol. 2013, 47 (21), 12081-12088.
    • (2013) Environ. Sci. Technol. , vol.47 , Issue.21 , pp. 12081-12088
    • Joy, S.R.1    Bartelt-Hunt, S.L.2    Snow, D.D.3    Gilley, J.E.4    Woodbury, B.L.5    Parker, D.B.6    Marx, D.B.7    Li, X.8
  • 5
    • 84899894131 scopus 로고    scopus 로고
    • Distribution and risk assessment of quinolone antibiotics in the soils from organic vegetable farms of a subtropical city, Southern China
    • Wu, X. L.; Xiang, L.; Yan, Q. Y.; Jiang, Y. N.; Li, Y. W.; Huang, X. P.; Li, H.; Cai, Q. Y.; Mo, C. H. Distribution and risk assessment of quinolone antibiotics in the soils from organic vegetable farms of a subtropical city, Southern China. Sci. Total Environ. 2014, 487, 399-406.
    • (2014) Sci. Total Environ. , vol.487 , pp. 399-406
    • Wu, X.L.1    Xiang, L.2    Yan, Q.Y.3    Jiang, Y.N.4    Li, Y.W.5    Huang, X.P.6    Li, H.7    Cai, Q.Y.8    Mo, C.H.9
  • 7
    • 79952002621 scopus 로고    scopus 로고
    • Subinhibitory concentrations of ciprofloxacin induce SOS response and mutations of antibiotic resistance in bacteria
    • Wang, P.; Zhang, X. N.; Wang, L.; Zhen, Z.; Tang, M. L.; Li, J. B. Subinhibitory concentrations of ciprofloxacin induce SOS response and mutations of antibiotic resistance in bacteria. Ann. Microbiol. 2010, 60 (3), 511-517.
    • (2010) Ann. Microbiol. , vol.60 , Issue.3 , pp. 511-517
    • Wang, P.1    Zhang, X.N.2    Wang, L.3    Zhen, Z.4    Tang, M.L.5    Li, J.B.6
  • 8
    • 79958169187 scopus 로고    scopus 로고
    • Distribution of ten antibiotic resistance genes in E. coli isolates from swine manure, lagoon effluent and soil collected from a lagoon waste application field
    • Graves, A. K.; Liwimbi, L.; Israel, D. W.; van Heugten, E.; Robinson, B.; Cahoon, C. W.; Lubbers, J. F. Distribution of ten antibiotic resistance genes in E. coli isolates from swine manure, lagoon effluent and soil collected from a lagoon waste application field. Folia Microbiol. 2011, 56 (2), 131-137.
    • (2011) Folia Microbiol. , vol.56 , Issue.2 , pp. 131-137
    • Graves, A.K.1    Liwimbi, L.2    Israel, D.W.3    Van Heugten, E.4    Robinson, B.5    Cahoon, C.W.6    Lubbers, J.F.7
  • 11
    • 69549111337 scopus 로고    scopus 로고
    • Antibiotics for emerging pathogens
    • Fischbach, M. A.; Walsh, C. T. Antibiotics for emerging pathogens. Science 2009, 325 (5944), 1089-1093.
    • (2009) Science , vol.325 , Issue.5944 , pp. 1089-1093
    • Fischbach, M.A.1    Walsh, C.T.2
  • 12
    • 84865531061 scopus 로고    scopus 로고
    • The shared antibiotic resistome of soil bacteria and human pathogens
    • Forsberg, K. J.; Reyes, A.; Bin, W.; Selleck, E. M.; Sommer, M. O. A.; Dantas, G. The shared antibiotic resistome of soil bacteria and human pathogens. Science 2012, 337 (6098), 1107-1111.
    • (2012) Science , vol.337 , Issue.6098 , pp. 1107-1111
    • Forsberg, K.J.1    Reyes, A.2    Bin, W.3    Selleck, E.M.4    Sommer, M.O.A.5    Dantas, G.6
  • 13
    • 84860473244 scopus 로고    scopus 로고
    • Impact of treated wastewater irrigation on antibiotic resistance in agricultural soils
    • Negreanu, Y.; Pasternak, Z.; Jurkevitch, E.; Cytryn, E. Impact of treated wastewater irrigation on antibiotic resistance in agricultural soils. Environ. Sci. Technol. 2012, 46 (9), 4800-4808.
    • (2012) Environ. Sci. Technol. , vol.46 , Issue.9 , pp. 4800-4808
    • Negreanu, Y.1    Pasternak, Z.2    Jurkevitch, E.3    Cytryn, E.4
  • 14
    • 84884165786 scopus 로고    scopus 로고
    • Diversity, distribution and antibiotic resistance of Enterococcus spp. Recovered from tomatoes, leaves, water and soil on US Mid-Atlantic farms
    • Micallef, S. A.; Goldstein, R. E. R.; George, A.; Ewing, L.; Tall, B.; Boyer, M. S.; Joseph, S. W.; Sapkota, A. R. Diversity, distribution and antibiotic resistance of Enterococcus spp. Recovered from tomatoes, leaves, water and soil on US Mid-Atlantic farms. Food Microbiol. 2013, 36 (2), 465-474.
    • (2013) Food Microbiol. , vol.36 , Issue.2 , pp. 465-474
    • Micallef, S.A.1    Goldstein, R.E.R.2    George, A.3    Ewing, L.4    Tall, B.5    Boyer, M.S.6    Joseph, S.W.7    Sapkota, A.R.8
  • 15
    • 84891630438 scopus 로고    scopus 로고
    • Distribution of antibiotic-resistant bacteria in chicken manure and manure-fertilized vegetables
    • Yang, Q. X.; Ren, S. W.; Niu, T. Q.; Guo, Y. H.; Qi, S. Y.; Han, X. K.; Liu, D.; Pan, F. Distribution of antibiotic-resistant bacteria in chicken manure and manure-fertilized vegetables. Environ. Sci. Pollut. Res. 2014, 21 (2), 1231-1241.
    • (2014) Environ. Sci. Pollut. Res. , vol.21 , Issue.2 , pp. 1231-1241
    • Yang, Q.X.1    Ren, S.W.2    Niu, T.Q.3    Guo, Y.H.4    Qi, S.Y.5    Han, X.K.6    Liu, D.7    Pan, F.8
  • 17
    • 79960556756 scopus 로고    scopus 로고
    • Leaching of human pathogens in repacked soil lysimeters and contamination of potato tubers under subsurface drip irrigation in Denmark
    • Forslund, A.; Plauborg, F.; Andersen, M. N.; Markussen, B.; Dalsgaard, A. Leaching of human pathogens in repacked soil lysimeters and contamination of potato tubers under subsurface drip irrigation in Denmark. Water Res. 2011, 45 (15), 4367-4380.
    • (2011) Water Res. , vol.45 , Issue.15 , pp. 4367-4380
    • Forslund, A.1    Plauborg, F.2    Andersen, M.N.3    Markussen, B.4    Dalsgaard, A.5
  • 18
    • 84895523528 scopus 로고    scopus 로고
    • Effect of manure application on abundance of antibiotic resistance genes and their attenuation rates in soil: Field-scale mass balance approach
    • Fahrenfeld, N.; Knowlton, K.; Krometis, L. A.; Hession, W. C.; Xia, K.; Lipscomb, E.; Libuit, K.; Green, B. L.; Pruden, A. Effect of manure application on abundance of antibiotic resistance genes and their attenuation rates in soil: field-scale mass balance approach. Environ. Sci. Technol. 2014, 48 (5), 2643-2650.
    • (2014) Environ. Sci. Technol. , vol.48 , Issue.5 , pp. 2643-2650
    • Fahrenfeld, N.1    Knowlton, K.2    Krometis, L.A.3    Hession, W.C.4    Xia, K.5    Lipscomb, E.6    Libuit, K.7    Green, B.L.8    Pruden, A.9
  • 19
    • 84887616437 scopus 로고    scopus 로고
    • Variations in dissipation rate, microbial function and antibiotic resistance due to repeated introductions of manure containing sulfadiazine and chlortetracycline to soil
    • Fang, H.; Han, Y. L.; Yin, Y. M.; Pan, X.; Yu, Y. L. Variations in dissipation rate, microbial function and antibiotic resistance due to repeated introductions of manure containing sulfadiazine and chlortetracycline to soil. Chemosphere 2014, 96, 51-56.
    • (2014) Chemosphere , vol.96 , pp. 51-56
    • Fang, H.1    Han, Y.L.2    Yin, Y.M.3    Pan, X.4    Yu, Y.L.5
  • 20
    • 84867218766 scopus 로고    scopus 로고
    • Simultaneous determination of veterinary antibiotics and hormone in broiler manure, soil and manure compost by liquid chromatography-tandem mass spectrometry
    • Ho, Y. B.; Zakaria, M. P.; Latif, P. A.; Saari, N. Simultaneous determination of veterinary antibiotics and hormone in broiler manure, soil and manure compost by liquid chromatography-tandem mass spectrometry. J. Chromatogr., A 2012, 1262, 160-168.
    • (2012) J. Chromatogr., A , vol.1262 , pp. 160-168
    • Ho, Y.B.1    Zakaria, M.P.2    Latif, P.A.3    Saari, N.4
  • 21
    • 58149183697 scopus 로고    scopus 로고
    • ARDB-Antibiotic Resistance Genes Database
    • Liu, B.; Pop, M. ARDB-Antibiotic Resistance Genes Database. Nucleic Acids Res. 2009, 37, D443-D447.
    • (2009) Nucleic Acids Res. , vol.37 , pp. D443-D447
    • Liu, B.1    Pop, M.2
  • 23
    • 84861904854 scopus 로고    scopus 로고
    • VFDB 2012 update: Toward the genetic diversity and molecular evolution of bacterial virulence factors
    • Chen, L. H.; Xiong, Z. H.; Sun, L. L.; Yang, J.; Jin, Q. VFDB 2012 update: toward the genetic diversity and molecular evolution of bacterial virulence factors. Nucleic Acids Res. 2012, 40 (D1), D641-D645.
    • (2012) Nucleic Acids Res. , vol.40 , Issue.D1 , pp. D641-D645
    • Chen, L.H.1    Xiong, Z.H.2    Sun, L.L.3    Yang, J.4    Jin, Q.5
  • 24
    • 51449108782 scopus 로고    scopus 로고
    • Comparative metagenomics reveals host specific metavirulomes and horizontal Gene transfer elements in the chicken cecum microbiome
    • Qu, A.; Brulc, J. M.; Wilson, M. K.; Law, B. F.; Theoret, J. R.; Joens, L. A.; Konkel, M. E.; Angly, F.; Dinsdale, E. A.; Edwards, R. A. Comparative metagenomics reveals host specific metavirulomes and horizontal Gene transfer elements in the chicken cecum microbiome. PLoS One 2008, 3 (8), e2945.
    • (2008) PLoS One , vol.3 , Issue.8 , pp. e2945
    • Qu, A.1    Brulc, J.M.2    Wilson, M.K.3    Law, B.F.4    Theoret, J.R.5    Joens, L.A.6    Konkel, M.E.7    Angly, F.8    Dinsdale, E.A.9    Edwards, R.A.10
  • 26
    • 67649798304 scopus 로고    scopus 로고
    • Investigation of sulfonamides and tetracyclines antibiotics in soils from various vegetable fields
    • Li, Y. W.; Mo, C. H.; Zhao, N.; Tai, Y. P.; Bao, Y. P.; Wang, J. Y.; Li, M. Y.; Liang, W. M. Investigation of sulfonamides and tetracyclines antibiotics in soils from various vegetable fields. Environ. Sci. 2009, 30 (6), 1762-1766.
    • (2009) Environ. Sci. , vol.30 , Issue.6 , pp. 1762-1766
    • Li, Y.W.1    Mo, C.H.2    Zhao, N.3    Tai, Y.P.4    Bao, Y.P.5    Wang, J.Y.6    Li, M.Y.7    Liang, W.M.8
  • 27
    • 84876173702 scopus 로고    scopus 로고
    • Monitoring the perturbation of soil and groundwater microbial communities due to pig production activities
    • Hong, P. Y.; Yannarell, A. C.; Dai, Q. H.; Ekizoglu, M.; Mackie, R. I. Monitoring the perturbation of soil and groundwater microbial communities due to pig production activities. Appl. Environ. Microbiol. 2013, 79 (8), 2620-2629.
    • (2013) Appl. Environ. Microbiol. , vol.79 , Issue.8 , pp. 2620-2629
    • Hong, P.Y.1    Yannarell, A.C.2    Dai, Q.H.3    Ekizoglu, M.4    Mackie, R.I.5
  • 28
    • 84865803333 scopus 로고    scopus 로고
    • Antibiotic resistance gene abundances associated with antibiotics and heavy metals in animal manures and agricultural soils adjacent to feedlots in Shanghai, China
    • Ji, X. L.; Shen, Q. H.; Liu, F.; Ma, J.; Xu, G.; Wang, Y. L.; Wu, M. H. Antibiotic resistance gene abundances associated with antibiotics and heavy metals in animal manures and agricultural soils adjacent to feedlots in Shanghai, China. J. Hazard. Mater. 2012, 235, 178-185.
    • (2012) J. Hazard. Mater. , vol.235 , pp. 178-185
    • Ji, X.L.1    Shen, Q.H.2    Liu, F.3    Ma, J.4    Xu, G.5    Wang, Y.L.6    Wu, M.H.7
  • 29
    • 84891144385 scopus 로고    scopus 로고
    • Occurrence and distribution of veterinary antibiotics and tetracycline resistance genes in farmland soils around swine feedlots in Fujian Province, China
    • Huang, X.; Liu, C. X.; Li, K.; Liu, F.; Liao, D. R.; Liu, L.; Zhu, G. F.; Liao, J. Occurrence and distribution of veterinary antibiotics and tetracycline resistance genes in farmland soils around swine feedlots in Fujian Province, China. Environ. Sci. Pollut. Res. 2013, 20 (12), 9066-9074.
    • (2013) Environ. Sci. Pollut. Res. , vol.20 , Issue.12 , pp. 9066-9074
    • Huang, X.1    Liu, C.X.2    Li, K.3    Liu, F.4    Liao, D.R.5    Liu, L.6    Zhu, G.F.7    Liao, J.8
  • 30
    • 33846948962 scopus 로고    scopus 로고
    • Manure and sulfadiazine synergistically increased bacterial antibiotic resistance in soil over at least two months
    • Heuer, H.; Smalla, K. Manure and sulfadiazine synergistically increased bacterial antibiotic resistance in soil over at least two months. Environ. Microbiol. 2007, 9 (3), 657-666.
    • (2007) Environ. Microbiol. , vol.9 , Issue.3 , pp. 657-666
    • Heuer, H.1    Smalla, K.2
  • 31
    • 84903626940 scopus 로고    scopus 로고
    • Detection of pathogens, indicators, and antibiotic resistance genes after land application of poultry litter
    • Cook, K. L.; Netthisinghe, A. M. P.; Gilfillen, R. A. Detection of pathogens, indicators, and antibiotic resistance genes after land application of poultry litter. J. Environ. Qual. 2014, 43 (5), 1546-1558.
    • (2014) J. Environ. Qual. , vol.43 , Issue.5 , pp. 1546-1558
    • Cook, K.L.1    Netthisinghe, A.M.P.2    Gilfillen, R.A.3
  • 32
    • 33845302994 scopus 로고    scopus 로고
    • Antibiotic resistance genes as emerging contaminants: Studies in northern Colorado
    • Pruden, A.; Pei, R. T.; Storteboom, H.; Carlson, K. H. Antibiotic resistance genes as emerging contaminants: studies in northern Colorado. Environ. Sci. Technol. 2006, 40 (23), 7445- 7450.
    • (2006) Environ. Sci. Technol. , vol.40 , Issue.23 , pp. 7445-7450
    • Pruden, A.1    Pei, R.T.2    Storteboom, H.3    Carlson, K.H.4
  • 33
    • 80053648189 scopus 로고    scopus 로고
    • Engineering multiple genomic deletions in Gram-negative bacteria: Analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440
    • Martinez-Garcia, E.; de Lorenzo, V. Engineering multiple genomic deletions in Gram-negative bacteria: analysis of the multi-resistant antibiotic profile of Pseudomonas putida KT2440. Environ. Microbiol. 2011, 13 (10), 2702-2716.
    • (2011) Environ. Microbiol. , vol.13 , Issue.10 , pp. 2702-2716
    • Martinez-Garcia, E.1    De Lorenzo, V.2
  • 34
    • 63849172530 scopus 로고    scopus 로고
    • Spreading antibiotic resistance through spread manure: Characteristics of a novel plasmid type with low %G plus C content
    • Heuer, H.; Kopmann, C.; Binh, C. T. T.; Top, E. M.; Smalla, K. Spreading antibiotic resistance through spread manure: characteristics of a novel plasmid type with low %G plus C content. Environ. Microbiol. 2009, 11 (4), 937-949.
    • (2009) Environ. Microbiol. , vol.11 , Issue.4 , pp. 937-949
    • Heuer, H.1    Kopmann, C.2    Binh, C.T.T.3    Top, E.M.4    Smalla, K.5
  • 35
    • 77956531457 scopus 로고    scopus 로고
    • Abundance and diversity of tetracycline resistance genes in soils adjacent to representative swine feedlots in China
    • Wu, N.; Qiao, M.; Zhang, B.; Cheng, W. D.; Zhu, Y. G. Abundance and diversity of tetracycline resistance genes in soils adjacent to representative swine feedlots in China. Environ. Sci. Technol. 2010, 44 (18), 6933-6939.
    • (2010) Environ. Sci. Technol. , vol.44 , Issue.18 , pp. 6933-6939
    • Wu, N.1    Qiao, M.2    Zhang, B.3    Cheng, W.D.4    Zhu, Y.G.5
  • 36
    • 78651396480 scopus 로고    scopus 로고
    • Levels of antibiotic resistance genes in manure, biosolids, and fertilized soil
    • Munir, M.; Xagoraraki, I. Levels of antibiotic resistance genes in manure, biosolids, and fertilized soil. J. Environ. Qual. 2011, 40 (1), 248-255.
    • (2011) J. Environ. Qual. , vol.40 , Issue.1 , pp. 248-255
    • Munir, M.1    Xagoraraki, I.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.