The circadian clock and defence signalling in plants

Molecular Plant Pathology

Volumn 16, Issue 2, 2015, Pages 210-218

  Sharma, Mayank ^a   Bhatt, Deepesh ^a  

^a MAHYCO Life Sciences Research Centre   (India)

Author keywords

Biotic stress; Circadian clock; Defence signalling; Plant immunity

Indexed keywords

HYALOPERONOSPORA; PSEUDOMONAS SYRINGAE;

CIRCADIAN RHYTHM; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; PHYSIOLOGY; PLANT; PLANT IMMUNITY; SIGNAL TRANSDUCTION;

CIRCADIAN CLOCKS; GENE EXPRESSION REGULATION, PLANT; PLANT IMMUNITY; PLANTS; SIGNAL TRANSDUCTION;

EID: 84921290781     PISSN: 14646722     EISSN: 13643703     Source Type: Journal    
DOI: 10.1111/mpp.12178     Document Type: Article

References (64)

1. Abeles, F.B., Morgan, P.W. and Saltveit, M.E. Jr (1992) Ethylene in Plant Biology. San Diego, California: Academic Press, Inc.
2. Alabadí, D., Oyama, T., Yanovsky, M.J., Harmon, F.G., Mas, P. and Kay, S.A. (2001) Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock. Science, 293, 880-883.
3. Antico, C.J., Colon, C., Banks, T. and Ramonell, K.M. (2012) Insights into the role of jasmonic acid-mediated defenses against necrotrophic and biotrophic fungal pathogens. Front. Biol. 7, 48-56.
4. Bell-Pedersen, D., Cassone, V.M., Earnest, D.J., Golden, S.S., Hardin, P.E., Thomas, T.L. and Zoran, M.J. (2005) Circadian rhythms from multiple oscillators: lessons from diverse organisms. Nat. Rev. Genet. 6, 544-556.
5. Bhardwaj, V., Meier, S., Petersen, L.N., Ingle, R.A. and Roden, L.C. (2011) Defence responses of Arabidopsis thaliana to infection by Pseudomonas syringae are regulated by the circadian clock. PLoS ONE, 6, e26968.
6. Bieniawska, Z., Espinoza, C., Schlereth, A., Sulpice, R., Hincha, D.K. and Hannah, M.A. (2008) Disruption of the Arabidopsis circadian clock is responsible for extensive variation in the cold-responsive transcriptome. Plant Physiol. 147, 263-279.
7. Büttner, D. and He, S.Y. (2009) Type III protein secretion in plant pathogenic bacteria. Plant Physiol. 150, 1656-1664.
8. Campbell, C.L., Huang, J. and Payne, G.A. (2012) Defense at the perimeter: the outer walls and the gates. Plant Dis. Adv. Treat. 5, 103-120.
9. Chisholm, S.T., Coaker, G., Day, B. and Staskawicz, B.J. (2006) Host-microbe interactions: shaping the evolution of the plant immune response. Cell, 124, 803-814.
10. Covington, M.F. and Harmer, S.L. (2007) The circadian clock regulates auxin signaling and responses in Arabidopsis. PLoS biol. 5, e222.
11. Covington, M.F., Maloof, J.N., Straume, M., Kay, S.A. and Harmer, S.L. (2008) Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development. Genome Biol. 9, R130.
12. Cui, X., Lu, F., Li, Y., Xue, Y., Kang, Y., Zhang, S., Qui, Q., Cui, X., Zheng, S., Liu, B., Xu, X. and Cao, X. (2013) Ubiquitin-specific proteases UBP12 and UBP13 act in circadian clock and photoperiodic flowering regulation in Arabidopsis. Plant Physiol. 162, 897-906.
13. Donofrio, N.M. and Delaney, T.P. (2001) Abnormal callose response phenotype and hypersusceptibility to Peronospora parasitica in defense-compromised Arabidopsis nim1-1 and salicylate hydroxylase-expressing plants. Mol. Plant-Microbe Interact. 14, 439-450.
14. Duhart, J.M., Leone, M.J., Paladino, N., Evans, J.A., Castanon-Cervantes, O., Davidson, A.J. and Golombek, D.A. (2013) Suprachiasmatic astrocytes modulate the circadian clock in response to TNF-α. J. Immunol. 191, 4656-4664.
15. Engelmann, W. and Johnsson, A. (1998) Rhythms in organ movement. In: Biological Rhythms and Photoperiodism in Plants (Lumsden, P.J. and Millar, A.J., eds), pp. 35-50. Oxford: BIOS Scientific Publishers.
16. Fu, Z.Q. and Dong, X. (2013) Systemic acquired resistance: turning local infection into global defense. Annu. Rev. Plant Biol. 64, 839-863.
17. Gaffney, T., Friedrich, L., Vernooij, B., Negrotto, D., Nye, G., Uknes, S., Ward, E., Kessmann, H. and Ryals, J. (1993) Requirement of salicylic acid for the induction of systemic acquired resistance. Science, 261, 754-756.
18. Gendron, J.M., Pruneda-Paz, J.L., Doherty, C.J., Gross, A.M., Kang, S.E. and Kay, S.A. (2012) Arabidopsis circadian clock protein, TOC1, is a DNA-binding transcription factor. Proc. Natl. Acad. Sci. USA, 109, 3167-3172.
19. Genoud, T., Buchala, A.J., Chua, N.H. and Métraux, J.P. (2002) Phytochrome signalling modulates the SA-perceptive pathway in Arabidopsis. Plant J. 31, 87-95.
20. Goodspeed, D., Chehab, E.W., Min-Venditti, A., Braam, J. and Covington, M.F. (2012) Arabidopsis synchronizes jasmonate-mediated defence with insect circadian behavior. Proc. Natl. Acad. Sci. USA, 109, 4674-4677.
21. Goodspeed, D., Chehab, E.W., Covington, M.F. and Braam, J. (2013a) Circadian control of jasmonates and salicylates: the clock role in plant defense. Plant Sign. Behav. 8, e23123.
22. Goodspeed, D., Liu, J.D., Chehab, E.W., Sheng, Z., Francisco, M., Kliebenstein, D.J. and Braam, J. (2013b) Postharvest circadian entrainment enhances crop pest resistance and phytochemical cycling. Curr. Biol. 23, 1235-1241.
23. Griebel, T. and Zeier, J. (2008) Light regulation and daytime dependency of inducible plant defences in Arabidopsis: phytochrome signalling controls systemic acquired resistance rather than local defence. Plant Physiol. 147, 790-801.
24. Harmer, S.L. (2009) The circadian system in higher plants. Annu. Rev. Plant Biol. 60, 357-377.
25. Harmer, S.L., Hogenesch, J.B., Straume, M., Chang, H.S., Han, B., Zhu, T., Wang, X., Kreps, J.A. and Kay, S.A. (2000) Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science, 290, 2110-2113.
26. Heintzen, C., Nater, M., Apel, K. and Staiger, D. (1997) AtGRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA, 94, 8515-8520.
27. Hsu, P.Y. and Harmer, S.L. (2014) Wheels within wheels: the plant circadian system. Trends plant sci. 19, 240-249.
28. Hua, J. (2013) Modulation of plant immunity by light, circadian rhythm, and temperature. Curr. Opin. Plant Biol. 16, 406-413.
29. Ingle, R.A., Carstens, M. and Denby, K.J. (2006) PAMP recognition and the plant-pathogen arms race. Bioessays, 28, 880-889.
30. Jones, J.D. and Dangl, J.L. (2006) The plant immune system. Nature, 444, 323-329.
31. Jones, M.A. (2009) Entrainment of the Arabidopsis circadian clock. J. Plant Biol. 52, 202-209.
32. Kinmonth-Schultz, H.A., Golembeski, G.S. and Imaizumi, T. (2013) Circadian clock-regulated physiological outputs: dynamic responses in nature. Semin. Cell Dev. Biol. 24, 407-413.
33. Kloppstech, K. (1985) Diurnal and circadian rhythmicity in the expression of light-induced nuclear messenger RNAs. Planta, 165, 502-506.
34. Kuo, T.H., Pike, D.H., Beizaeipour, Z. and Williams, J.A. (2010) Sleep triggered by an immune response in Drosophila is regulated by the circadian clock and requires the NFκB Relish. BMC Neurosci. 11, 17.
35. van Loon, L.C., Geraats, B.P. and Linthorst, H.J. (2006) Ethylene as a modulator of disease resistance in plants. Trends Plant Sci. 11, 184-191.
36. Malapeira, J. and Mas, P. (2013) A chromatin-dependent mechanism regulates gene expression at the core of the Arabidopsis circadian clock. Plant Sign. Behav. 8, e24079-e24079.
37. Mangeon, A., Junqueira, R.M. and Sachetto-Martins, G. (2010) Functional diversity of the plant glycine-rich proteins superfamily. Plant Signal. Behav. 5, 99-104.
38. McClung, C.R. (2001) Circadian rhythms in plants. Annu. Rev. Plant Biol. 52, 139-162.
39. McClung, C.R. (2006) Plant circadian rhythms. Plant Cell, 18, 792-803.
40. McClung, C.R. (2011) The genetics of plant clocks. Adv. Genet. 74, 105-139.
41. McClung, C.R. (2014) Wheels within wheels: new transcriptional feedback loops in the Arabidopsis circadian clock. F1000Prime Rep. 6, 1-6.
42. Molina, A., Mena, M., Carbonero, P. and García-Olmedo, F. (1997) Differential expression of pathogen-responsive genes encoding two types of glycine-rich proteins in barley. Plant Mol. Biol. 33, 803-810.
43. Nicaise, V., Joe, A., Jeong, B.R., Korneli, C., Boutrot, F., Westedt, I., Staiger, D., Alfano, J.R. and Zipfel, C. (2013) Pseudomonas HopU1 modulates plant immune receptor levels by blocking the interaction of their mRNAs with GRP7. EMBO J. 32, 701-712.
44. Niki, T., Mitsuhara, I., Seo, S., Ohtsubo, N. and Ohashi, Y. (1998) Antagonistic effect of salicylic acid and jasmonic acid on the expression of pathogenesis-related (PR) protein genes in wounded mature tobacco leaves. Plant Cell Physiol. 39, 500-507.
45. Nürnberger, T., Brunner, F., Kemmerling, B. and Piater, L. (2004) Innate immunity in plants and animals: striking similarities and obvious differences. Immunol. Rev. 198, 249-266.
46. Petre, B. and Kamoun, S. (2014) How do filamentous pathogens deliver effector proteins into plant cells? PLoS Biol. 12, e1001801.
47. Rate, D.N., Cuenca, J.V., Bowman, G.R., Guttman, D.S. and Greenberg, J.T. (1999) The gain-of-function Arabidopsis acd6 mutant reveals novel regulation and function of the salicylic acid signaling pathway in controlling cell death, defenses, and cell growth. Plant Cell, 11, 1695-1708.
48. Robert-Seilaniantz, A., Grant, M. and Jones, J.D. (2011) Hormone crosstalk in plant disease and defense: more than just jasmonate-salicylate antagonism. Annu. Rev. Phytopathol. 49, 317-343.
49. Robertson, F.C., Skeffington, A.W., Gardner, M.J. and Webb, A.A. (2009) Interactions between circadian and hormonal signalling in plants. Plant Mol. Biol. 69, 419-427.
50. Roden, L.C. and Ingle, R.A. (2009) Lights, rhythms, infection: the role of light and the circadian clock in determining the outcome of plant-pathogen interactions. Plant Cell, 21, 2546-2552.
51. Ryals, J.A., Neuenschwander, U.H., Willits, M.G., Molina, A., Steiner, H.Y. and Hunt, M.D. (1996) Systemic acquired resistance. Plant Cell, 8, 1809-1819.
52. Sanchez, A., Shin, J. and Davis, S.J. (2011) Abiotic stress and the plant circadian clock. Plant Signal. Behav. 6, 223-231.
53. Scheiermann, C., Kunisaki, Y. and Frenette, P.S. (2013) Circadian control of the immune system. Nat. Rev. Immunol. 13, 190-198.
54. Shin, J., Heidrich, K., Sanchez-Villarreal, A., Parker, J.E. and Davis, S.J. (2012) TIME FOR COFFEE represses accumulation of the MYC2 transcription factor to provide time-of-day regulation of jasmonate signaling in Arabidopsis Plant Cell. 24, 2470-2482.
55. Slusarenko, A.J. and Schlaich, N.L. (2003) Downy mildew of Arabidopsis thaliana caused by Hyaloperonospora parasitica (formerly Peronospora parasitica). Mol. Plant Pathol. 4, 159-170.
56. Streitner, C., Danisman, S., Wehrle, F., Schöning, J.C., Alfano, J.R. and Staiger, D. (2008) The small glycine-rich RNA binding protein AtGRP7 promotes floral transition in Arabidopsis thaliana. Plant J. 56, 239-250.
57. Thain, S.C., Vandenbussche, F., Laarhoven, L.J., Dowson-Day, M.J., Wang, Z.Y., Tobin, E.M. and Van Der Straeten, D. (2004) Circadian rhythms of ethylene emission in Arabidopsis. Plant Physiol. 136, 3751-3761.
58. Van der Ent, S. and Pieterse, C.M. (2012) Ethylene: multi-tasker in plant-attacker interactions. Annu. Plant Rev. 44, 343-378.
59. Vlot, A.C., Dempsey, D.M.A. and Klessig, D.F. (2009) Salicylic acid, a multifaceted hormone to combat disease. Annu. Rev. Phytopathol. 47, 177-206.
60. Wang, W., Barnaby, J.Y., Tada, Y., Li, H., Tör, M., Caldelari, D., Lee, D.-U., Fu, X. and Dong, X. (2011) Timing of plant immune responses by a central circadian regulator. Nature, 470, 110-114.
61. Yakir, E., Hilman, D., Harir, Y. and Green, R.M. (2007) Regulation of output from the plant circadian clock. FEBS J. 274, 335-345.
62. Zeier, J., Delledonne, M., Mishina, T., Severi, E., Sonoda, M. and Lamb, C. (2004) Genetic elucidation of nitric oxide signalling in incompatible plant-pathogen interactions. Plant Physiol. 136, 2875-2886.
63. Zhang, C., Xie, Q., Anderson, R.G., Ng, G., Seitz, N.C., Peterson, T., McClung, C.R., McDowell, J.M., Kong, D., Kwak, J.M. and Lu, H. (2013) Crosstalk between the circadian clock and innate immunity in Arabidopsis. PLoS Pathog. 9, e1003370.
64. Zhou, M. (2014) The molecular interplay between the circadian clock and the plant immune signal, salicylic acid. PhD Thesis, Duke University. Available at http://hdl.handle.net/10161/8677.