메뉴 건너뛰기




Volumn 12, Issue 9, 2014, Pages

Fission Yeast Pxd1 Promotes Proper DNA Repair by Activating Rad16XPF and Inhibiting Dna2

Author keywords

[No Author keywords available]

Indexed keywords

CDC24 PROTEIN; DEOXYRIBONUCLEASE; DNA2 PROTEIN; ENDONUCLEASE; FUNGAL PROTEIN; PXD1 PROTEIN; RAD16 PROTEIN; SINGLE STRANDED DNA; SWI10 PROTEIN; UNCLASSIFIED DRUG;

EID: 84920448339     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.1001946     Document Type: Article
Times cited : (19)

References (43)
  • 1
    • 79951500316 scopus 로고    scopus 로고
    • Okazaki fragment maturation: nucleases take centre stage
    • Zheng L, Shen B, (2011) Okazaki fragment maturation: nucleases take centre stage. J Mol Cell Biol 3: 23–30.
    • (2011) J Mol Cell Biol , vol.3 , pp. 23-30
    • Zheng, L.1    Shen, B.2
  • 3
    • 0038799991 scopus 로고    scopus 로고
    • Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
    • Paques F, Haber JE, (1999) Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol Mol Biol Rev 63: 349–404.
    • (1999) Microbiol Mol Biol Rev , vol.63 , pp. 349-404
    • Paques, F.1    Haber, J.E.2
  • 4
    • 0026583875 scopus 로고
    • Two alternative pathways of double-strand break repair that are kinetically separable and independently modulated
    • Fishman-Lobell J, Rudin N, Haber JE, (1992) Two alternative pathways of double-strand break repair that are kinetically separable and independently modulated. Mol Cell Biol 12: 1292–1303.
    • (1992) Mol Cell Biol , vol.12 , pp. 1292-1303
    • Fishman-Lobell, J.1    Rudin, N.2    Haber, J.E.3
  • 5
    • 51549095956 scopus 로고    scopus 로고
    • Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends
    • Zhu Z, Chung WH, Shim EY, Lee SE, Ira G, (2008) Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends. Cell 134: 981–994.
    • (2008) Cell , vol.134 , pp. 981-994
    • Zhu, Z.1    Chung, W.H.2    Shim, E.Y.3    Lee, S.E.4    Ira, G.5
  • 6
    • 0026498944 scopus 로고
    • Removal of nonhomologous DNA ends in double-strand break recombination: the role of the yeast ultraviolet repair gene RAD1
    • Fishman-Lobell J, Haber JE, (1992) Removal of nonhomologous DNA ends in double-strand break recombination: the role of the yeast ultraviolet repair gene RAD1. Science 258: 480–484.
    • (1992) Science , vol.258 , pp. 480-484
    • Fishman-Lobell, J.1    Haber, J.E.2
  • 7
    • 34548747505 scopus 로고    scopus 로고
    • Phosphorylation of Slx4 by Mec1 and Tel1 regulates the single-strand annealing mode of DNA repair in budding yeast
    • Flott S, Alabert C, Toh GW, Toth R, Sugawara N, et al. (2007) Phosphorylation of Slx4 by Mec1 and Tel1 regulates the single-strand annealing mode of DNA repair in budding yeast. Mol Cell Biol 27: 6433–6445.
    • (2007) Mol Cell Biol , vol.27 , pp. 6433-6445
    • Flott, S.1    Alabert, C.2    Toh, G.W.3    Toth, R.4    Sugawara, N.5
  • 8
    • 43049111100 scopus 로고    scopus 로고
    • Microarray-based genetic screen defines SAW1, a gene required for Rad1/Rad10-dependent processing of recombination intermediates
    • Li F, Dong J, Pan X, Oum JH, Boeke JD, et al. (2008) Microarray-based genetic screen defines SAW1, a gene required for Rad1/Rad10-dependent processing of recombination intermediates. Mol Cell 30: 325–335.
    • (2008) Mol Cell , vol.30 , pp. 325-335
    • Li, F.1    Dong, J.2    Pan, X.3    Oum, J.H.4    Boeke, J.D.5
  • 9
    • 55749089233 scopus 로고    scopus 로고
    • Mutants defective in Rad1-Rad10-Slx4 exhibit a unique pattern of viability during mating-type switching in Saccharomyces cerevisiae
    • Lyndaker AM, Goldfarb T, Alani E, (2008) Mutants defective in Rad1-Rad10-Slx4 exhibit a unique pattern of viability during mating-type switching in Saccharomyces cerevisiae. Genetics 179: 1807–1821.
    • (2008) Genetics , vol.179 , pp. 1807-1821
    • Lyndaker, A.M.1    Goldfarb, T.2    Alani, E.3
  • 10
    • 77952581455 scopus 로고    scopus 로고
    • Mec1/Tel1-dependent phosphorylation of Slx4 stimulates Rad1-Rad10-dependent cleavage of non-homologous DNA tails
    • Toh GW, Sugawara N, Dong J, Toth R, Lee SE, et al. (2010) Mec1/Tel1-dependent phosphorylation of Slx4 stimulates Rad1-Rad10-dependent cleavage of non-homologous DNA tails. DNA Repair (Amst) 9: 718–726.
    • (2010) DNA Repair (Amst) , vol.9 , pp. 718-726
    • Toh, G.W.1    Sugawara, N.2    Dong, J.3    Toth, R.4    Lee, S.E.5
  • 11
    • 84873568504 scopus 로고    scopus 로고
    • Role of Saw1 in Rad1/Rad10 complex assembly at recombination intermediates in budding yeast
    • Li F, Dong J, Eichmiller R, Holland C, Minca E, et al. (2013) Role of Saw1 in Rad1/Rad10 complex assembly at recombination intermediates in budding yeast. EMBO J 32: 461–472.
    • (2013) EMBO J , vol.32 , pp. 461-472
    • Li, F.1    Dong, J.2    Eichmiller, R.3    Holland, C.4    Minca, E.5
  • 13
    • 0028210436 scopus 로고
    • The rad16 gene of Schizosaccharomyces pombe: a homolog of the RAD1 gene of Saccharomyces cerevisiae
    • Carr AM, Schmidt H, Kirchhoff S, Muriel WJ, Sheldrick KS, et al. (1994) The rad16 gene of Schizosaccharomyces pombe: a homolog of the RAD1 gene of Saccharomyces cerevisiae. Mol Cell Biol 14: 2029–2040.
    • (1994) Mol Cell Biol , vol.14 , pp. 2029-2040
    • Carr, A.M.1    Schmidt, H.2    Kirchhoff, S.3    Muriel, W.J.4    Sheldrick, K.S.5
  • 14
    • 0027064447 scopus 로고
    • The protein sequence and some intron positions are conserved between the switching gene swi10 of Schizosaccharomyces pombe and the human excision repair gene ERCC1
    • Rodel C, Kirchhoff S, Schmidt H, (1992) The protein sequence and some intron positions are conserved between the switching gene swi10 of Schizosaccharomyces pombe and the human excision repair gene ERCC1. Nucleic Acids Res 20: 6347–6353.
    • (1992) Nucleic Acids Res , vol.20 , pp. 6347-6353
    • Rodel, C.1    Kirchhoff, S.2    Schmidt, H.3
  • 15
    • 13444309600 scopus 로고    scopus 로고
    • Genetics of lagging strand DNA synthesis and maturation in fission yeast: suppression analysis links the Dna2-Cdc24 complex to DNA polymerase delta
    • Tanaka H, Ryu GH, Seo YS, MacNeill SA, (2004) Genetics of lagging strand DNA synthesis and maturation in fission yeast: suppression analysis links the Dna2-Cdc24 complex to DNA polymerase delta. Nucleic Acids Res 32: 6367–6377.
    • (2004) Nucleic Acids Res , vol.32 , pp. 6367-6377
    • Tanaka, H.1    Ryu, G.H.2    Seo, Y.S.3    MacNeill, S.A.4
  • 16
    • 67249153681 scopus 로고    scopus 로고
    • Ctp1 and Exonuclease 1, alternative nucleases regulated by the MRN complex, are required for efficient meiotic recombination
    • Farah JA, Cromie GA, Smith GR, (2009) Ctp1 and Exonuclease 1, alternative nucleases regulated by the MRN complex, are required for efficient meiotic recombination. Proc Natl Acad Sci U S A 106: 9356–9361.
    • (2009) Proc Natl Acad Sci U S A , vol.106 , pp. 9356-9361
    • Farah, J.A.1    Cromie, G.A.2    Smith, G.R.3
  • 17
    • 0037451243 scopus 로고    scopus 로고
    • Pathway utilization in response to a site-specific DNA double-strand break in fission yeast
    • Prudden J, Evans JS, Hussey SP, Deans B, O'Neill P, et al. (2003) Pathway utilization in response to a site-specific DNA double-strand break in fission yeast. EMBO J 22: 1419–1430.
    • (2003) EMBO J , vol.22 , pp. 1419-1430
    • Prudden, J.1    Evans, J.S.2    Hussey, S.P.3    Deans, B.4    O'Neill, P.5
  • 18
    • 59949092789 scopus 로고    scopus 로고
    • A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair
    • Jain S, Sugawara N, Lydeard J, Vaze M, Tanguy Le Gac N, et al. (2009) A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair. Genes Dev 23: 291–303.
    • (2009) Genes Dev , vol.23 , pp. 291-303
    • Jain, S.1    Sugawara, N.2    Lydeard, J.3    Vaze, M.4    Tanguy Le Gac, N.5
  • 19
    • 0024426593 scopus 로고
    • Some of the swi genes of Schizosaccharomyces pombe also have a function in the repair of radiation damage
    • Schmidt H, Kapitza-Fecke P, Stephen ER, Gutz H, (1989) Some of the swi genes of Schizosaccharomyces pombe also have a function in the repair of radiation damage. Curr Genet 16: 89–94.
    • (1989) Curr Genet , vol.16 , pp. 89-94
    • Schmidt, H.1    Kapitza-Fecke, P.2    Stephen, E.R.3    Gutz, H.4
  • 20
    • 16244406870 scopus 로고    scopus 로고
    • Fission yeast mating-type switching: programmed damage and repair
    • Egel R, (2005) Fission yeast mating-type switching: programmed damage and repair. DNA Repair (Amst) 4: 525–536.
    • (2005) DNA Repair (Amst) , vol.4 , pp. 525-536
    • Egel, R.1
  • 21
    • 79953761297 scopus 로고    scopus 로고
    • SUMO-targeted ubiquitin ligase, Rad60, and Nse2 SUMO ligase suppress spontaneous Top1-mediated DNA damage and genome instability
    • Heideker J, Prudden J, Perry JJ, Tainer JA, Boddy MN, (2011) SUMO-targeted ubiquitin ligase, Rad60, and Nse2 SUMO ligase suppress spontaneous Top1-mediated DNA damage and genome instability. PLoS Genet 7: e1001320.
    • (2011) PLoS Genet , vol.7 , pp. e1001320
    • Heideker, J.1    Prudden, J.2    Perry, J.J.3    Tainer, J.A.4    Boddy, M.N.5
  • 22
    • 0036850709 scopus 로고    scopus 로고
    • The fission yeast pfh1(+) gene encodes an essential 5′ to 3′ DNA helicase required for the completion of S-phase
    • Tanaka H, Ryu GH, Seo YS, Tanaka K, Okayama H, et al. (2002) The fission yeast pfh1(+) gene encodes an essential 5′ to 3′ DNA helicase required for the completion of S-phase. Nucleic Acids Res 30: 4728–4739.
    • (2002) Nucleic Acids Res , vol.30 , pp. 4728-4739
    • Tanaka, H.1    Ryu, G.H.2    Seo, Y.S.3    Tanaka, K.4    Okayama, H.5
  • 23
    • 4043051012 scopus 로고    scopus 로고
    • Genetic and biochemical analyses of Pfh1 DNA helicase function in fission yeast
    • Ryu GH, Tanaka H, Kim DH, Kim JH, Bae SH, et al. (2004) Genetic and biochemical analyses of Pfh1 DNA helicase function in fission yeast. Nucleic Acids Res 32: 4205–4216.
    • (2004) Nucleic Acids Res , vol.32 , pp. 4205-4216
    • Ryu, G.H.1    Tanaka, H.2    Kim, D.H.3    Kim, J.H.4    Bae, S.H.5
  • 24
    • 0035954737 scopus 로고    scopus 로고
    • RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes
    • Bae SH, Bae KH, Kim JA, Seo YS, (2001) RPA governs endonuclease switching during processing of Okazaki fragments in eukaryotes. Nature 412: 456–461.
    • (2001) Nature , vol.412 , pp. 456-461
    • Bae, S.H.1    Bae, K.H.2    Kim, J.A.3    Seo, Y.S.4
  • 26
    • 80053447704 scopus 로고    scopus 로고
    • Release of Ku and MRN from DNA ends by Mre11 nuclease activity and Ctp1 is required for homologous recombination repair of double-strand breaks
    • Langerak P, Mejia-Ramirez E, Limbo O, Russell P, (2011) Release of Ku and MRN from DNA ends by Mre11 nuclease activity and Ctp1 is required for homologous recombination repair of double-strand breaks. PLoS Genet 7: e1002271.
    • (2011) PLoS Genet , vol.7 , pp. e1002271
    • Langerak, P.1    Mejia-Ramirez, E.2    Limbo, O.3    Russell, P.4
  • 27
    • 0033946617 scopus 로고    scopus 로고
    • DNA length dependence of the single-strand annealing pathway and the role of Saccharomyces cerevisiae RAD59 in double-strand break repair
    • Sugawara N, Ira G, Haber JE, (2000) DNA length dependence of the single-strand annealing pathway and the role of Saccharomyces cerevisiae RAD59 in double-strand break repair. Mol Cell Biol 20: 5300–5309.
    • (2000) Mol Cell Biol , vol.20 , pp. 5300-5309
    • Sugawara, N.1    Ira, G.2    Haber, J.E.3
  • 28
    • 67649655402 scopus 로고    scopus 로고
    • Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases
    • Fekairi S, Scaglione S, Chahwan C, Taylor ER, Tissier A, et al. (2009) Human SLX4 is a Holliday junction resolvase subunit that binds multiple DNA repair/recombination endonucleases. Cell 138: 78–89.
    • (2009) Cell , vol.138 , pp. 78-89
    • Fekairi, S.1    Scaglione, S.2    Chahwan, C.3    Taylor, E.R.4    Tissier, A.5
  • 29
    • 79957904161 scopus 로고    scopus 로고
    • FANCP/SLX4: a Swiss army knife of DNA interstrand crosslink repair
    • Cybulski KE, Howlett NG, (2011) FANCP/SLX4: a Swiss army knife of DNA interstrand crosslink repair. Cell Cycle 10: 1757–1763.
    • (2011) Cell Cycle , vol.10 , pp. 1757-1763
    • Cybulski, K.E.1    Howlett, N.G.2
  • 30
    • 84872082435 scopus 로고    scopus 로고
    • Regulation of multiple DNA repair pathways by the Fanconi anemia protein SLX4
    • Kim Y, Spitz GS, Veturi U, Lach FP, Auerbach AD, et al. (2013) Regulation of multiple DNA repair pathways by the Fanconi anemia protein SLX4. Blood 121: 54–63.
    • (2013) Blood , vol.121 , pp. 54-63
    • Kim, Y.1    Spitz, G.S.2    Veturi, U.3    Lach, F.P.4    Auerbach, A.D.5
  • 31
    • 0347990576 scopus 로고    scopus 로고
    • Slx1–Slx4 are subunits of a structure-specific endonuclease that maintains ribosomal DNA in fission yeast
    • Coulon S, Gaillard PH, Chahwan C, McDonald WH, Yates JR, 3rdet al. (2004) Slx1–Slx4 are subunits of a structure-specific endonuclease that maintains ribosomal DNA in fission yeast. Mol Biol Cell 15: 71–80.
    • (2004) Mol Biol Cell , vol.15 , pp. 71-80
    • Coulon, S.1    Gaillard, P.H.2    Chahwan, C.3    McDonald, W.H.4    Yates, J.R.5
  • 32
    • 80052492286 scopus 로고    scopus 로고
    • Cell cycle regulation of DNA double-strand break end resection by Cdk1-dependent Dna2 phosphorylation
    • Chen X, Niu H, Chung WH, Zhu Z, Papusha A, et al. (2011) Cell cycle regulation of DNA double-strand break end resection by Cdk1-dependent Dna2 phosphorylation. Nat Struct Mol Biol 18: 1015–1019.
    • (2011) Nat Struct Mol Biol , vol.18 , pp. 1015-1019
    • Chen, X.1    Niu, H.2    Chung, W.H.3    Zhu, Z.4    Papusha, A.5
  • 33
    • 15244361942 scopus 로고    scopus 로고
    • Chromosomal translocation mechanisms at intronic alu elements in mammalian cells
    • Elliott B, Richardson C, Jasin M, (2005) Chromosomal translocation mechanisms at intronic alu elements in mammalian cells. Mol Cell 17: 885–894.
    • (2005) Mol Cell , vol.17 , pp. 885-894
    • Elliott, B.1    Richardson, C.2    Jasin, M.3
  • 34
    • 33846704345 scopus 로고    scopus 로고
    • Inviting instability: transposable elements, double-strand breaks, and the maintenance of genome integrity
    • Hedges DJ, Deininger PL, (2007) Inviting instability: transposable elements, double-strand breaks, and the maintenance of genome integrity. Mutat Res 616: 46–59.
    • (2007) Mutat Res , vol.616 , pp. 46-59
    • Hedges, D.J.1    Deininger, P.L.2
  • 35
    • 79958013665 scopus 로고    scopus 로고
    • A genetic and structural study of genome rearrangements mediated by high copy repeat Ty1 elements
    • Chan JE, Kolodner RD, (2011) A genetic and structural study of genome rearrangements mediated by high copy repeat Ty1 elements. PLoS Genet 7: e1002089.
    • (2011) PLoS Genet , vol.7 , pp. e1002089
    • Chan, J.E.1    Kolodner, R.D.2
  • 36
    • 33645128681 scopus 로고    scopus 로고
    • Basic methods for fission yeast
    • Forsburg SL, Rhind N, (2006) Basic methods for fission yeast. Yeast 23: 173–183.
    • (2006) Yeast , vol.23 , pp. 173-183
    • Forsburg, S.L.1    Rhind, N.2
  • 37
    • 84855831157 scopus 로고    scopus 로고
    • Multiple end joining mechanisms repair a chromosomal DNA break in fission yeast
    • Li P, Li J, Li M, Dou K, Zhang MJ, et al. (2012) Multiple end joining mechanisms repair a chromosomal DNA break in fission yeast. DNA Repair (Amst) 11: 120–130.
    • (2012) DNA Repair (Amst) , vol.11 , pp. 120-130
    • Li, P.1    Li, J.2    Li, M.3    Dou, K.4    Zhang, M.J.5
  • 38
    • 84877831999 scopus 로고    scopus 로고
    • A proteome-wide visual screen identifies fission yeast proteins localizing to DNA double-strand breaks
    • Yu Y, Ren JY, Zhang JM, Suo F, Fang XF, et al. (2013) A proteome-wide visual screen identifies fission yeast proteins localizing to DNA double-strand breaks. DNA Repair (Amst) 12: 433–443.
    • (2013) DNA Repair (Amst) , vol.12 , pp. 433-443
    • Yu, Y.1    Ren, J.Y.2    Zhang, J.M.3    Suo, F.4    Fang, X.F.5
  • 39
    • 0028269495 scopus 로고
    • Efficient targeted integration at leu1-32 and ura4-294 in Schizosaccharomyces pombe
    • Keeney JB, Boeke JD, (1994) Efficient targeted integration at leu1-32 and ura4-294 in Schizosaccharomyces pombe. Genetics 136: 849–856.
    • (1994) Genetics , vol.136 , pp. 849-856
    • Keeney, J.B.1    Boeke, J.D.2
  • 40
    • 10244240475 scopus 로고    scopus 로고
    • pDUAL, a multipurpose, multicopy vector capable of chromosomal integration in fission yeast
    • Matsuyama A, Shirai A, Yashiroda Y, Kamata A, Horinouchi S, et al. (2004) pDUAL, a multipurpose, multicopy vector capable of chromosomal integration in fission yeast. Yeast 21: 1289–1305.
    • (2004) Yeast , vol.21 , pp. 1289-1305
    • Matsuyama, A.1    Shirai, A.2    Yashiroda, Y.3    Kamata, A.4    Horinouchi, S.5
  • 41
    • 33746112995 scopus 로고    scopus 로고
    • ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe
    • Matsuyama A, Arai R, Yashiroda Y, Shirai A, Kamata A, et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat Biotechnol 24: 841–847.
    • (2006) Nat Biotechnol , vol.24 , pp. 841-847
    • Matsuyama, A.1    Arai, R.2    Yashiroda, Y.3    Shirai, A.4    Kamata, A.5
  • 42
    • 84866117936 scopus 로고    scopus 로고
    • Identification of cross-linked peptides from complex samples
    • Yang B, Wu YJ, Zhu M, Fan SB, Lin J, et al. (2012) Identification of cross-linked peptides from complex samples. Nat Methods 9: 904–906.
    • (2012) Nat Methods , vol.9 , pp. 904-906
    • Yang, B.1    Wu, Y.J.2    Zhu, M.3    Fan, S.B.4    Lin, J.5
  • 43
    • 84876004639 scopus 로고    scopus 로고
    • Mapping genomic hotspots of DNA damage by a single-strand-DNA-compatible and strand-specific ChIP-seq method
    • Zhou ZX, Zhang MJ, Peng X, Takayama Y, Xu XY, et al. (2013) Mapping genomic hotspots of DNA damage by a single-strand-DNA-compatible and strand-specific ChIP-seq method. Genome Res 23: 705–715.
    • (2013) Genome Res , vol.23 , pp. 705-715
    • Zhou, Z.X.1    Zhang, M.J.2    Peng, X.3    Takayama, Y.4    Xu, X.Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.