-
1
-
-
0035478585
-
Macromolecular crowding: Obvious but underappreciated
-
R.J. Ellis Macromolecular crowding: obvious but underappreciated Trends Biochem. Sci. 26 2001 597 604
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 597-604
-
-
Ellis, R.J.1
-
2
-
-
0041931122
-
Macromolecular crowding: Qualitative and semiquantitative successes, quantitative challenges
-
D. Hall, and A.P. Minton Macromolecular crowding: qualitative and semiquantitative successes, quantitative challenges Biochim. Biophys. Acta 1649 2003 127 139
-
(2003)
Biochim. Biophys. Acta
, vol.1649
, pp. 127-139
-
-
Hall, D.1
Minton, A.P.2
-
3
-
-
0035815743
-
The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media
-
A.P. Minton The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media J. Biol. Chem. 276 2001 10577 10580
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 10577-10580
-
-
Minton, A.P.1
-
4
-
-
2442543316
-
Reaction kinetics in intracellular environments with macromolecular crowding: Simulations and rate laws
-
S. Schnell, and T.E. Turner Reaction kinetics in intracellular environments with macromolecular crowding: simulations and rate laws Prog. Biophys. Mol. Biol. 85 2004 235 260
-
(2004)
Prog. Biophys. Mol. Biol.
, vol.85
, pp. 235-260
-
-
Schnell, S.1
Turner, T.E.2
-
5
-
-
25444487734
-
Influence of macromolecular crowding upon the stability and state of association of proteins: Predictions and observations
-
A.P. Minton Influence of macromolecular crowding upon the stability and state of association of proteins: predictions and observations J. Pharm. Sci. 94 2005 1668 1675
-
(2005)
J. Pharm. Sci.
, vol.94
, pp. 1668-1675
-
-
Minton, A.P.1
-
6
-
-
0033991590
-
Cytoarchitecture and physical properties of cytoplasm: Volume, viscosity, diffusion, intracellular surface area
-
K. Luby-Phelps Cytoarchitecture and physical properties of cytoplasm: volume, viscosity, diffusion, intracellular surface area Int. Rev. Cytol. 192 2000 189 221
-
(2000)
Int. Rev. Cytol.
, vol.192
, pp. 189-221
-
-
Luby-Phelps, K.1
-
7
-
-
17844364513
-
Paradigm shift of the plasma membrane concept from the two-dimensional continuum fluid to the partitioned fluid: High-speed single-molecule tracking of membrane molecules
-
A. Kusumi, and C. Nakada T. Fujiwara Paradigm shift of the plasma membrane concept from the two-dimensional continuum fluid to the partitioned fluid: high-speed single-molecule tracking of membrane molecules Annu. Rev. Biophys. Biomol. Struct. 34 2005 351 378
-
(2005)
Annu. Rev. Biophys. Biomol. Struct.
, vol.34
, pp. 351-378
-
-
Kusumi, A.1
Nakada, C.2
Fujiwara, T.3
-
8
-
-
48249124302
-
Crowding effects on diffusion in solutions and cells
-
J.A. Dix, and A.S. Verkman Crowding effects on diffusion in solutions and cells Annu Rev Biophys 37 2008 247 263
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 247-263
-
-
Dix, J.A.1
Verkman, A.S.2
-
9
-
-
79953903082
-
New insights into diffusion in 3D crowded media by Monte Carlo simulations: Effect of size, mobility and spatial distribution of obstacles
-
E. Vilaseca, and A. Isvoran F. Mas New insights into diffusion in 3D crowded media by Monte Carlo simulations: effect of size, mobility and spatial distribution of obstacles Phys. Chem. Chem. Phys. 13 2011 7396 7407
-
(2011)
Phys. Chem. Chem. Phys.
, vol.13
, pp. 7396-7407
-
-
Vilaseca, E.1
Isvoran, A.2
Mas, F.3
-
10
-
-
77954011992
-
Molecular sieving properties of the cytoplasm of Escherichia coli and consequences of osmotic stress
-
J.T. Mika, and G. van den Bogaart B. Poolman Molecular sieving properties of the cytoplasm of Escherichia coli and consequences of osmotic stress Mol. Microbiol. 77 2010 200 207
-
(2010)
Mol. Microbiol.
, vol.77
, pp. 200-207
-
-
Mika, J.T.1
Van Den Bogaart, G.2
Poolman, B.3
-
11
-
-
78651253456
-
Protein diffusion in the periplasm of E. Coli under osmotic stress
-
K.A. Sochacki, and I.A. Shkel J.C. Weisshaar Protein diffusion in the periplasm of E. coli under osmotic stress Biophys. J. 100 2011 22 31
-
(2011)
Biophys. J.
, vol.100
, pp. 22-31
-
-
Sochacki, K.A.1
Shkel, I.A.2
Weisshaar, J.C.3
-
12
-
-
30244438013
-
Rate-processes on fractals: Theory, simulations, and experiments
-
R. Kopelman Rate-processes on fractals: theory, simulations, and experiments J. Stat. Phys. 42 1986 185 200
-
(1986)
J. Stat. Phys.
, vol.42
, pp. 185-200
-
-
Kopelman, R.1
-
13
-
-
33744544180
-
Fractal reaction kinetics
-
R. Kopelman Fractal reaction kinetics Science 241 1988 1620 1626
-
(1988)
Science
, vol.241
, pp. 1620-1626
-
-
Kopelman, R.1
-
14
-
-
0036789480
-
Monte carlo simulations of enzyme reactions in two dimensions: Fractal kinetics and spatial segregation
-
H. Berry Monte carlo simulations of enzyme reactions in two dimensions: fractal kinetics and spatial segregation Biophys. J. 83 2002 1891 1901
-
(2002)
Biophys. J.
, vol.83
, pp. 1891-1901
-
-
Berry, H.1
-
15
-
-
33748977501
-
A systematic investigation of the rate laws valid in intracellular environments
-
R. Grima, and S. Schnell A systematic investigation of the rate laws valid in intracellular environments Biophys. Chem. 124 2006 1 10
-
(2006)
Biophys. Chem.
, vol.124
, pp. 1-10
-
-
Grima, R.1
Schnell, S.2
-
16
-
-
84894161979
-
Unravelling the impact of obstacles in diffusion and kinetics of an enzyme catalysed reaction
-
M. Mourão, D. Kreitman, and S. Schnell Unravelling the impact of obstacles in diffusion and kinetics of an enzyme catalysed reaction Phys. Chem. Chem. Phys. 16 2014 4492 4503
-
(2014)
Phys. Chem. Chem. Phys.
, vol.16
, pp. 4492-4503
-
-
Mourão, M.1
Kreitman, D.2
Schnell, S.3
-
17
-
-
0031549616
-
Spatially resolved anomalous kinetics of a catalytic reaction: Enzymatic glucose oxidation in capillary spaces
-
A.L. Lin, M.S. Feldman, and R. Kopelman Spatially resolved anomalous kinetics of a catalytic reaction: enzymatic glucose oxidation in capillary spaces J. Phys. Chem. B 101 1997 7881 7884
-
(1997)
J. Phys. Chem. B
, vol.101
, pp. 7881-7884
-
-
Lin, A.L.1
Feldman, M.S.2
Kopelman, R.3
-
18
-
-
79952849764
-
Effect of crowding by dextrans on the hydrolysis of N-Succinyl-L-phenyl-Ala-p-nitroanilide catalyzed by α-chymotrypsin
-
I. Pastor, and E. Vilaseca F. Mas Effect of crowding by dextrans on the hydrolysis of N-Succinyl-L-phenyl-Ala-p-nitroanilide catalyzed by α-chymotrypsin J. Phys. Chem. B 115 2011 1115 1121
-
(2011)
J. Phys. Chem. B
, vol.115
, pp. 1115-1121
-
-
Pastor, I.1
Vilaseca, E.2
Mas, F.3
-
19
-
-
84888581228
-
Effect of crowding by Dextrans in enzymatic reactions
-
I. Pastor, and L. Pitulice F. Mas Effect of crowding by Dextrans in enzymatic reactions Biophys. Chem. 185 2014 8 13
-
(2014)
Biophys. Chem.
, vol.185
, pp. 8-13
-
-
Pastor, I.1
Pitulice, L.2
Mas, F.3
-
20
-
-
0026409841
-
Characterization of the cytoplasm of Escherichia coli K-12 as a function of external osmolarity. Implications for protein-DNA interactions in vivo
-
S. Cayley, and B.A. Lewis M.T. Record Jr. Characterization of the cytoplasm of Escherichia coli K-12 as a function of external osmolarity. Implications for protein-DNA interactions in vivo J. Mol. Biol. 222 1991 281 300
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 281-300
-
-
Cayley, S.1
Lewis, B.A.2
Record, Jr.M.T.3
-
22
-
-
0037470574
-
Effect of dextran on protein stability and conformation attributed to macromolecular crowding
-
K. Sasahara, P. McPhie, and A.P. Minton Effect of dextran on protein stability and conformation attributed to macromolecular crowding J. Mol. Biol. 326 2003 1227 1237
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 1227-1237
-
-
Sasahara, K.1
McPhie, P.2
Minton, A.P.3
-
24
-
-
0026448778
-
Model for the role of macromolecular crowding in regulation of cellular volume
-
A.P. Minton, G.C. Colclasure, and J.C. Parker Model for the role of macromolecular crowding in regulation of cellular volume Proc. Natl. Acad. Sci. USA 89 1992 10504 10506
-
(1992)
Proc. Natl. Acad. Sci. USA
, vol.89
, pp. 10504-10506
-
-
Minton, A.P.1
Colclasure, G.C.2
Parker, J.C.3
-
25
-
-
0034529090
-
Macromolecular crowding as a cell volume sensor
-
M.B. Burg Macromolecular crowding as a cell volume sensor Cell. Physiol. Biochem. 10 2000 251 256
-
(2000)
Cell. Physiol. Biochem.
, vol.10
, pp. 251-256
-
-
Burg, M.B.1
-
26
-
-
0032520708
-
Mechanical properties of the collagen network in human articular cartilage as measured by osmotic stress technique
-
P.J. Basser, and R. Schneiderman A. Maroudas Mechanical properties of the collagen network in human articular cartilage as measured by osmotic stress technique Arch. Biochem. Biophys. 351 1998 207 219
-
(1998)
Arch. Biochem. Biophys.
, vol.351
, pp. 207-219
-
-
Basser, P.J.1
Schneiderman, R.2
Maroudas, A.3
-
27
-
-
84875848929
-
Severe osmotic compression triggers a slowdown of intracellular signaling, which can be explained by molecular crowding
-
A. Miermont, and F. Waharte P. Hersen Severe osmotic compression triggers a slowdown of intracellular signaling, which can be explained by molecular crowding Proc. Natl. Acad. Sci. USA 110 2013 5725 5730
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 5725-5730
-
-
Miermont, A.1
Waharte, F.2
Hersen, P.3
-
28
-
-
0028140412
-
Anomalous diffusion due to obstacles: A Monte Carlo study
-
M.J. Saxton Anomalous diffusion due to obstacles: a Monte Carlo study Biophys. J. 66 1994 394 401
-
(1994)
Biophys. J.
, vol.66
, pp. 394-401
-
-
Saxton, M.J.1
-
29
-
-
67649774582
-
Universal behavior of the osmotically compressed cell and its analogy to the colloidal glass transition
-
E.H. Zhou, and X. Trepat J.J. Fredberg Universal behavior of the osmotically compressed cell and its analogy to the colloidal glass transition Proc. Natl. Acad. Sci. USA 106 2009 10632 10637
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 10632-10637
-
-
Zhou, E.H.1
Trepat, X.2
Fredberg, J.J.3
-
30
-
-
84899657388
-
Filament formation by metabolic enzymes is a specific adaptation to an advanced state of cellular starvation
-
I. Petrovska, and E. Nüske S. Alberti Filament formation by metabolic enzymes is a specific adaptation to an advanced state of cellular starvation eLife 3 2014 e024099
-
(2014)
ELife
, vol.3
, pp. 024099
-
-
Petrovska, I.1
Nüske, E.2
Alberti, S.3
-
31
-
-
33750522651
-
Actin bodies in yeast quiescent cells: An immediately available actin reserve?
-
I. Sagot, and B. Pinson B. Daignan-Fornier Actin bodies in yeast quiescent cells: an immediately available actin reserve? Mol. Biol. Cell 17 2006 4645 4655
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 4645-4655
-
-
Sagot, I.1
Pinson, B.2
Daignan-Fornier, B.3
-
32
-
-
1942425450
-
A role for macromolecular crowding effects in the assembly and function of compartments in the nucleus
-
R. Hancock A role for macromolecular crowding effects in the assembly and function of compartments in the nucleus J. Struct. Biol. 146 2004 281 290
-
(2004)
J. Struct. Biol.
, vol.146
, pp. 281-290
-
-
Hancock, R.1
-
34
-
-
0025056539
-
Regulatory volume increase in Ehrlich ascites tumor cells
-
C. Levinson Regulatory volume increase in Ehrlich ascites tumor cells Biochim. Biophys. Acta 1021 1990 1 8
-
(1990)
Biochim. Biophys. Acta
, vol.1021
, pp. 1-8
-
-
Levinson, C.1
-
36
-
-
0034631854
-
Intracellular pH regulation by Na(+)/H(+) exchange requires phosphatidylinositol 4,5-bisphosphate
-
O. Aharonovitz, and H.C. Zaun S. Grinstein Intracellular pH regulation by Na(+)/H(+) exchange requires phosphatidylinositol 4,5-bisphosphate J. Cell Biol. 150 2000 213 224
-
(2000)
J. Cell Biol.
, vol.150
, pp. 213-224
-
-
Aharonovitz, O.1
Zaun, H.C.2
Grinstein, S.3
-
37
-
-
0022528544
-
Activation of Cl-dependent K transport in Ehrlich ascites tumor cells
-
B. Kramhøft, and I.H. Lambert F. Jørgensen Activation of Cl-dependent K transport in Ehrlich ascites tumor cells Am. J. Physiol. 251 1986 C369 C379
-
(1986)
Am. J. Physiol.
, vol.251
, pp. 369-C379
-
-
Kramhøft, B.1
Lambert, I.H.2
Jørgensen, F.3
-
39
-
-
84892828598
-
The bacterial cytoplasm has glass-like properties and is fluidized by metabolic activity
-
B.R. Parry, and I.V. Surovtsev C. Jacobs-Wagner The bacterial cytoplasm has glass-like properties and is fluidized by metabolic activity Cell 156 2014 183 194
-
(2014)
Cell
, vol.156
, pp. 183-194
-
-
Parry, B.R.1
Surovtsev, I.V.2
Jacobs-Wagner, C.3
-
40
-
-
0026344818
-
Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli
-
S.B. Zimmerman, and S.O. Trach Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli J. Mol. Biol. 222 1991 599 620
-
(1991)
J. Mol. Biol.
, vol.222
, pp. 599-620
-
-
Zimmerman, S.B.1
Trach, S.O.2
-
41
-
-
80052720461
-
From water and ions to crowded biomacromolecules: In vivo structuring of a prokaryotic cell
-
J. Spitzer From water and ions to crowded biomacromolecules: in vivo structuring of a prokaryotic cell Microbiol. Mol. Biol. Rev. 75 2011 491 506
-
(2011)
Microbiol. Mol. Biol. Rev.
, vol.75
, pp. 491-506
-
-
Spitzer, J.1
-
42
-
-
84907369302
-
Probing the stochastic, motor-driven properties of the cytoplasm using force spectrum microscopy
-
M. Guo, and A.J. Ehrlicher D.A. Weitz Probing the stochastic, motor-driven properties of the cytoplasm using force spectrum microscopy Cell 158 2014 822 832
-
(2014)
Cell
, vol.158
, pp. 822-832
-
-
Guo, M.1
Ehrlicher, A.J.2
Weitz, D.A.3
-
43
-
-
84881321639
-
Molecular crowding shapes gene expression in synthetic cellular nanosystems
-
C. Tan, and S. Saurabh P. Leduc Molecular crowding shapes gene expression in synthetic cellular nanosystems Nat. Nanotechnol. 8 2013 602 608
-
(2013)
Nat. Nanotechnol.
, vol.8
, pp. 602-608
-
-
Tan, C.1
Saurabh, S.2
Leduc, P.3
-
44
-
-
84885773167
-
Molecular crowding limits translation and cell growth
-
S. Klumpp, and M. Scott T. Hwa Molecular crowding limits translation and cell growth Proc. Natl. Acad. Sci. USA 110 2013 16754 16759
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 16754-16759
-
-
Klumpp, S.1
Scott, M.2
Hwa, T.3
-
45
-
-
84898850308
-
Macromolecular crowding as a regulator of gene transcription
-
H. Matsuda, and G.G. Putzel I. Szleifer Macromolecular crowding as a regulator of gene transcription Biophys. J. 106 2014 1801 1810
-
(2014)
Biophys. J.
, vol.106
, pp. 1801-1810
-
-
Matsuda, H.1
Putzel, G.G.2
Szleifer, I.3
-
46
-
-
67049112481
-
Imaging intracellular viscosity of a single cell during photoinduced cell death
-
M.K. Kuimova, and S.W. Botchway P.R. Ogilby Imaging intracellular viscosity of a single cell during photoinduced cell death Nat. Chem. 1 2009 69 73
-
(2009)
Nat. Chem.
, vol.1
, pp. 69-73
-
-
Kuimova, M.K.1
Botchway, S.W.2
Ogilby, P.R.3
|