Auxin biosynthesis and metabolism

Plant Hormones: Biosynthesis, Signal Transduction, Action!

Volumn , Issue , 2010, Pages 36-62

  Normanly, Jennifer ^a   Slovin, Janet P ^b   Cohen, Jerry D ^c  

^a UNIVERSITY OF MASSACHUSETTS   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c UNIVERSITY OF MINNESOTA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84920182941     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-1-4020-2686-7_3     Document Type: Chapter

References (70)

1. Aharoni N, Cohen JD (1986) Identification of IAA conjugates from IAA-treated tobacco leaves and their role in the induction of ethylene. Plant Physiol 80(S):34.
2. Bandurski R, Cohen J, Slovin J, and Reinecke D (1995) Auxin biosynthesis and metabolism, in Plant Hormones: Physiology, Biochemistry and Molecular Biology, P Davies, Editor, Kluwer Academic Publishers: Dordrecht, Boston, London. ISBN 0- 7923-2984-8. p. 39-65.
3. Bartel B, LeClere S, Magidin M, Zolman BK (2001) Inputs to the active indole-3-acetic acid pool: de novo synthesis, conjugate hydrolysis and indole-3-butyric acid - oxidation. J. Plant Growth Regulation. 20:198-216.
4. Benfey P (2002) Auxin action: Slogging out of the swamp. Current Biology 12: R389- R390.
5. Berleth T, Mattsson J, Hardtke C (2000) Vascular continuity and auxin signals. Trends in Plant Science 5:387-393.
6. Brader G, Tas E, Palva E, (2001) Jasmonate-dependent induction of indole glucosinolates in Arabidopsis by culture filtrates of the nonspecific pathogen Erwinia cartovora. Plant Physiol 126:849-860.
7. Celenza J, (2001) Metabolism of tyrosine and tryptophan-new genes for old pathways. Current Opinion in Plant Biology 4:234-240.
8. Chen S and Glawischnig E (2003) CYP79F1 and CYP79F2 have distinct functions in the biosynthesis of aliphatic glucosinolates in Arabidopsis. Plant J 33:923-937.
9. Chou J-C, Mulbry WW, Cohen JD (1998) The gene for indole-3-acetyl-L-aspartic acid hydrolase from Enterobacter agglomerans: molecular cloning, nucleotide sequence and expression in Escherichia coli. Molecular and General Genetics 259:172-178.
10. Cohen JD, Bialek K (1984) The biosynthesis of indole-3-acetic acid in higher plants. In: A. Crozier and J.R. Hillman, eds., The biosynthesis and metabolism of plant hormones. Society for Experimental Biology Seminar 23. Cambridge Univ. Press pp. 165-181.
11. Cohen JD, Bandurski RS (1982) Chemistry and physiology of the bound auxins. Annu Rev Plant Physiol 33:403-430.
12. Cohen JD, Slovin JP, Hendrickson A (2003) Two genetically discrete pathways convert tryptophan to auxin: more redundancy in auxin biosynthesis. Trends in Plant Science 8:197-199.
13. Cooke TJ, Poli DB, Sztein AE, Cohen JD (2002) Evolutionary patterns in auxin action. Plant Molecular Biology 49:319-338.
14. Doerner P (2000) Root patterning: Does auxin provide positional clues? Current Biology 10:R201-R203.
15. Eklöf S, Åstot C, Sitbon F, Moritz T, Olsson O, and Sandberg G (2000) Transgenic tobacco plants co-expressing Agrobacterium iaa and ipt genes have wild-type hormone levels but display both auxin- And cytokinin-overproducing phenotypes. Plant J 23:279- 284.
16. Epstein E, Cohen JD, Slovin JP (2002) The biosynthetic pathway for indole-3-acetic acid changes during tomato fruit development. Plant Growth Regulation 38:15-20.
17. Gierl A, Frey M (2001) Evolution of benzoxazinone biosynthesis and indole production in maize. Planta 213:493-498.
18. Glick B, Patten C, Holguin G, Penrose D (1999) Biochemical and genetic mechanisms used by plant growth promoting bacteria. Ontario, Canada: Imperial College Press, 267 pp.
19. Glick B, Saleh S (2001) Involvement of gacS and rpoS in enhancement of the plant growth-promoting capabilities of Enterobacter cloacae CAL2 and UW4. Canadian J Microbiology 47:698-705.
20. Hamann T (2001) The role of auxin in apical-basal pattern formation during Arabidopsis embryogenesis. J Plant Growth Regulation 20:292-299.
21. Hemm M, Reugger M, Chapple C (2003) The Arabidopsis ref2 mutant is defective in the gene encoding CYP83A1 and shows both phenylpropanoid and glucosinolate phenotypes. Plant Cell 15:179-194.
22. Iyer M, Cohen JD, Epstein E, Slovin JP (1999) An unexpected change in free IAA levels and alteration of fruit ripening in tomatoes transformed with the iaglu gene (Abstract). Amer Soc Plant Physiol. 1999:150.
23. Jackson RG, Lim EK, Li Y, Kowalczyk M, Sandberg G, Hoggett J, Ashford DA, Bowles DJ. (2001) Identification and biochemical characterization of an Arabidopsis indole-3-acetic acid glucosyltransferase. J Biol Chem.276:4350-4356.
24. Kerk N, Jiang K, Feldmann L (2000) Auxin metabolism in the root apical meristem. Plant Physiol 122:925-932.
25. Klee HJ, Lanahan MB (1995) Transgenic plants in hormone biology, in Plant Hormones: Physiology, Biochemistry and Molecular Biology, PJ Davies, Editor, Kluwer Academic Publishers: Dordrecht, Boston, London. ISBN 0-7923-2984-8. p. 340-353.
26. Kim G, Tsukaya H (2002) Regulation of the biosynthesis of plant hormones by P450s. Journal of Plant Research 115:169-177.
27. Kutz A, Muller A, Hennig P, Kaiser W, Piotrowski M, Weiler E (2002) A role for nitrilase 3 in the regulation of root morphology in sulphur-starving Arabidopsis thaliana. Plant J 30:95-106.
28. LeClere S, Tellez R, Rampey R, Matsuda S, Bartel B (2002) Characterization of a family of IAA-amino acid conjugate hydrolases from Arabidopsis. J Biological Chemistry 277:20446-20452.
29. Ljung K, Hull AK, Kowalczyk M, Marchant A, Celenza J, Cohen JD, Sandberg G (2002) Biosynthesis, conjugation, catabolism and homeostasis of indole-3-acetic acid in Arabidopsis thaliana. Plant Molecular Biology 50:309-332.
30. Ljung K, Östin A, Lioussanne L, Sandberg G (2001) Developmental regulation of indole-3-acetic acid turnover in Scots Pine seedlings. Plant Physiol 125:464-475.
31. Ludwig-Müller J (2000) Indole-3-butyric acid in plant growth and development. PlantGrowth Regulation 32:219-230.
32. Ludwig-Müller J, Cohen JD (2002) Identification and quantification of three active auxins in different tissues of Tropaeolum majus. Physiol Plant 115:320-329.
33. Mikkelsen M, Petersen B, Glawischnig E, Jensen A, Andreasson E, Halkier B (2003) Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by defense signaling pathways. Plant Physiol 131:298-308.
34. Muday G (2001) Auxin and tropisms. J Plant Growth Regulation 20:226-243.
35. Nakazawa M, Yabe N, Ichikawa T, Yamamoto YY, Yoshizumi T, Hasunuma K, Matsui M. (2001) DFL1, an auxin-responsive GH3 gene homologue, negatively regulates shoot cell elongation and lateral root formation, and positively regulates the light response of hypocotyl length. Plant J 25:213-221.
36. Ngo P, Ozga J, Reinecke D (2002) Specificity of auxin regulation of gibberellin 20- oxidase gene expression in pea pericarp. Plant Molecular Biology 49:439-448.
37. Nigovic G, Antolic S, Kojic-Prodic B, Kiralj R, Magnus V, Salopek-Sondi B (2000) Correlation of structural and physico-chemical parameters with bioactivity of alkylated derivatives of indole-3-acetic acid, a phytohormone (auxin). Acta Cryst B56:94-111.
38. Nigovic B, Kojic-Prodic B, Antolic S, Tomic S, Puntarec V, Cohen JD (1996) Structural studies on monohalogenated derivatives of the phytohormone indole-3-acetic acid (auxin). Acta Cryst B52:332-343.
39. Normanly J (1997) Auxin metabolism. Physiol Plant 100:431-442.
40. Normanly J, Bartel B (1999) Redundancy as a way of life-IAA metabolism. Current Opinion in Plant Biology 2:207-213.
41. Normanly J, Grisafi P, Fink GR, Bartel B (1997) Arabidopsis mutants resistant to the auxin effects of indole-3-acetonitrile are defective in the nitrilase encoded by the NIT1 gene. Plant Cell 9:1781-1790.
42. Normanly J, Slovin JP, Cohen JP (1995) Rethinking auxin biosynthesis and metabolism. Plant Physiol 107:323-329.
43. Oetiker J, Aeschbacher G (1997) Temperature-sensitive plant cells with shunted indole- 3-acetic acid conjugation. Plant Physiol 114:1385-1395.
44. Ozga J, Reinecke D (2003) Hormonal interactions in fruit development. J Plant Growth Regulation (in press).
45. Ozga J, Yu J, Reinecke D (2003) Pollination-, development-, and auxin-specific regulation of gibberellin 3β hydroxylase gene expression in pea fruit and seeds. Plant Physiol 131:1137-1146.
46. Patten C, Glick B (2002) Role of Pseudomonas putida indoleacetic acid in development of the host plant root system. Applied Environ Microbiology 68:3795-3801.
47. Patten C, Glick B (2002) Regulation of indoleacetic acid production in Pseudomonas putida GR12-2 by tryptophan and the stationary-phase sigma factor RpoS. Canadian J Microbiology 48:635-642.
48. Piotrowski M, Schonfelder S, and Weiler EW (2001) The Arabidopsis thaliana isogene NIT4 and its orthologs in tobacco encode -cyano-L-alanine hydratase/nitrilase. J Biological Chemistry 276:2616-2621.
49. Rapparini F, Tam Y, Cohen JD, Slovin JP (2002) IAA metabolism in Lemna gibba undergoes dynamic changes in response to growth temperature. Plant Physiol 128:1410- 1416.
50. Reintanz B, Lehnen M, Reichelt M, Gershenzon J, Kowalczyk M, Sandberg G, Godde M, Uhl R, Palme K (2001) bus, a bushy Arabidopsis CYP79F1 knockout mutant with abolished synthesis of short-chain aliphatic glucosinolates. Plant Cell 13:351-367.
51. Ribnicky D, Cohen JD, Hu W, Cooke TJ (2002) An auxin surge following fertilization in carrots: A mechanism for regulating plant totipotency. Planta 214: 505-509.
52. Ross J, O'Neill D, Wolbang C, Symons G, Reid J (2002) Auxin-gibberellin interactions and their role in plant growth. J Plant Growth Regulation 20:346-353.
53. 2 in auxin signaltransduction. Plant Molecular Biology 49:357-372.
54. Selmar D (1999) Biosynthesis of cyanogenic glycosides, glucosinolates and non protein amino acids, in Biochemistry of Plant Secondary Metabolism, M Wink, Editor, CRC Press: Boca Raton, FL. p. 79-150.
55. Sergeeva E, Liaimer A, Bergman B (2002) Evidence for production of the phytohormone indole-3-acetic acid by cyanobacteria. Planta 215:229-238.
56. Slovin JP, Bandurski RS, Cohen JD (1999) Auxin, in Biochemistry and Molecular Biology of Plant Hormones, P Hooykaas, M Hall, and K Libbenga, Editors, Elsevier Science: Oxford. p. 115-140.
57. Smolen G, Bender J (2002) Arabidopsis cytochrome P450 cyp83B1 mutations activate the tryptophan biosynthetic pathway. Genetics 160:323-332.
58. Staswick PE, Tiryaki I, Rowe ML (2002) Jasmonate response locus JAR1 and several related Arabidopsis genes encode enzymes of the firefly luciferase superfamily that show activity on jasmonic, salicylic, and indole-3-acetic acids in an assay for adenylation. Plant Cell 14:1405-1415.
59. Swarup R, Parry G, Graham N, Allen T, Bennett M (2002) Auxin cross-talk: integration of signalling pathways to control plant development. Plant Molecular Biology 49:411- 426.
60. Szmidt-Jaworska A, Kesy J, Kocewicz, J (1997) Transformation of 1-O-(indole-3- Acetyl)- -D-glucose into di-O-(indole-3-acetyl)-D-glucose catalysed by enzyme preparations from corn seedlings. Acta Biochmica Polonica 44:215-220.
61. Sztein A, Ilic N, Cohen JD, Cooke TJ (2002) Indole-3-acetic acid biosynthesis in isolated axes from germinating bean seeds: The effect of wounding on the biosynthetic pathway. Plant Growth Regulation 36:201-207.
62. Tam Y, Epstein E, Normanly J (2000) Characterization of auxin conjugates in Arabidopsis thaliana: low steady state levels of indole-3-acetyl-aspartate, indole-3- Acetyl-glutamate, and indole-3-acetyl glucose. Plant Physiol 123:589-595.
63. Tam Y, Normanly J, (2002) Overexpression of a bacterial indole-3-acetyl-L-aspartic acid hydrolase in Arabidopsis thaliana. Physiol Plant 115:513-522.
64. Tobena-Santamaria R, Bliek M, Ljung K, Sandberg G, Mol J, Souer E, Koes R (2002) FLOOZY of petunia is a flavin mono-oxygenase-like protein required for the specification of leaf and flower architecture. Genes and Development 16:753-763.
65. Vorwerk S, Biernacki S, Hillebrand H, Janzik IAM, Weiler EW, Piotrowski M (2001) Enzymatic characterization of the recombinant Arabidopsis thaliana nitrilase subfamily encoded by the NIT2/NIT1/NIT3-gene cluster. Planta 212:508-516.
66. Walz A, Park S, Slovin JP, Ludwig-Müller J, Momonoki YS, Cohen JD (2002) A gene encoding a protein modified by the phytohormone indoleacetic acid. Proc. Natl. Acad. USA 99:1718-1723.
67. Wittstock U, Halkier B (2002) Glucosinolate research in the Arabidopsis era. Trends in Plant Science 7:263-270.
68. Zhao Y, Christensen S, Fankhauser C, Cashman J, Cohen, JD, Weigel D, and Chory J (2001) A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science 291:306-309.
69. Zhao Y, Hull A, Gupta N, Goss K, Alonso J, Ecker J, Normanly J, Chory J, Celenza J (2002) Trp-dependent auxin biosynthesis in Arabidopsis: involvement of cytochrome P450s CYP79B2 and CYP79B3. Genes and Development 16:3100-3112.
70. Zook M (1998) Biosynthesis of camalexin from tryptophan pathway intermediates in cell-suspension cultures of Arabidopsis. Plant Physiol 118:1389-1398.