The zebrafish as an integrative physiology model

Integrative Physiology in the Proteomics and Post-Genomics Age

Volumn , Issue , 2005, Pages 215-237

  Novak, Alicia E ^a   Ribera, Angeles B ^a  

^a UNIVERSITY OF COLORADO   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84920089518     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1385/1-59259-925-7:215     Document Type: Chapter

References (169)

1. Mullins, M. C. and C. Nüsslein-Volhard (1993) Mutational approaches to studying embryonic pattern formation in the zebrafish. Curr. Op. Gen. Devel. 3:648-654.
2. Kuwada, J. Y. and R. R. Bernhardt (1990) Axonal outgrowth by identified neurons in the spinal cord of zebrafish embryos. Exp. Neurol. 109(1):29-34.
3. Bernhardt, R. R., A. B. Chitnis, L. Lindamer and J. Y. Kuwada. (1990) Identification of spinal neurons in the embryonic and larval zebrafish. J. Comp. Neurol. 302(3):603-616.
4. Kimmel, C. B. (1993) Patterning the brain of the zebrafish embryo. Ann. Rev. Neurosci. 16:707-732.
5. Inoue, A., M. Takahashi, K. Hatta, Y. Hotta and H. Okamoto. (1994) Developmental regulation of islet-1 mRNA expression during neuronal differentiation in embryonic zebrafish. Devel. Dyn. 199:1-11.
6. Martin, S. C., G. Heinrich and J. H. Sandell (1998) Sequence and expression of glutamic acid decarboxylase isoforms in the developing zebrafish. J. Comp. Neurol. 396(2):253-66.
7. Nguyen, V. H., J. Trout, S. A. Connors, P. Andermann and E. Weinberg. (2000) Dorsal and intermediate neuronal cell types of the spinal cord are established by a BMP signaling pathway. Devel. 127(6):1209-1220.
8. Hivert, B., Z. Liu, C. Y. Chuang, P. Doherty and V. Sundaresan. (2002) Robo1 and Robo2 are homophilic binding molecules that promote axonal growth. Mol. Cell. Neurosci. 21(4):534-545.
9. Kurita, R., H. Sagara, Y. Aoki, B. A. Link, K. Arai and S. Watanabe. (2003) Suppression of lens growth by alphaA-crystallin promoter-driven expression of diptheria toxin results in disruption of retinal cell organization in zebrafish. Devel. Biol. 255(1):113-127.
10. Legendre, P. A. (1998) A reluctant gating model of glycine receptor channels determines the time course of inhibitory miniature synaptic events in zebrafish hindbrain neurons. J. Neurosci. 18:2856-2870.
11. Ribera, A. B. and C. Nüsslein-Volhard (1998) Zebrafish touch-insensitive mutants reveal an essential role for the developmental regulation of sodium current. J. Neurosci. 18(22):9181-9191.
12. Drapeau, P., D. W. Ali, R. R. Buss and L. Saint-Amant. (1999) In vivo recording from identifiable neurons of the locomotor network in the developing zebrafish. J. Neurosci. Meth. 88:1-13.
13. Saint-Amant, L. and P. Drapeau (2000) Motoneuron activity patterns related to the earliest behavior of the zebrafish embryo. J. Neurosci. 20(11):3964-3972.
14. Saint-Amant, L. and P. Drapeau (2001) Synchronization of an embryonic network of identified spinal interneurons solely by electric coupling. Neuron 31:1035-1046.
15. Gnuegge, L., S. Schmid and S. C. F. Neuhauss (2001) Analysis of the activity-deprived zebrafish mutant macho reveals an essential requirement of neuronal activity for the development of a fine-grained visuotopic map. J. Neurosci. 21(10):3542-3548.
16. Spitzer, N. C. and J. E. Lamborghini (1976) The development of the action potential mechanism of amphibian neurons isolated in culture. Proc. Natl. Acad. Sci. 73(5):1641-1645.
17. Mullins, M. C. and C. Nüsslein-Volhard (1993) Mutational approaches to studying embryonic pattern formation in the zebrafish. Curr. Op. Genet. Devel. 3:648-654.
18. Currie, P. D. (1996) Zebrafish genetics: mutant cornucopia. Curr. Biol. 6(12):1548-1552.
19. Haffter, P., M. Granato, M. Brand, et al. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Devel. 123:1-36.
20. Golling, G., A. Amsterdam, Z. Sun, et al. (2002) Insertional mutagenesis in zebrafish rapidly identifies genes essential for early vertebrate development. Nature Genet. 31:135-140.
21. Driever, W., L. Solnica-Krezel, A. F. Schier, et al. (1996) A genetic screen for mutations affecting embryogenesis in zebrafish. Devel. 123:37-46.
22. Linares, A. E. (2002) Characterization of voltage-gated sodium channel genes expressed in zebrafish embryos. Ph. D. thesis in Neuroscience. University of Colorado Health Sciences Center: Denver.
23. Callahan, P. (2003) Building a better lab mouse - The zebrafish. In Wall Street J.
24. Roush, W. (1997) A Zebrafish Genome Project? Science 275:923.
25. Amemiya, C. T., T. P. Zhong, G. A. Silverman, M. C. Fishman and L. I. Zon. (1999) Zebrafish YAC, BAC and PAC genomic libraries. Methods Cell Biol. 60:235-258.
26. Lo, J., S. Lee, M. Xu, F, et al. (2003) 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Genome Res. 13(3):455-466.
27. Endo, A. and T. H. Ingalls (1968) Chromosomes of the zebrafish. A model for cytogenetic, embryologic and ecologic study. J. Hered. 59:382-384.
28. Daga, R. R., G. Thode and A. Amores (1996) Chromosome complement C-banding, Ag-NOR and replication banding in the zebrafish Danio rerio. Chrom. Res. 6(1):29-32.
29. Knapik, E. W., A. Goodman, M. Ekker, et al. (1998) A microsatellite genetic linkage map for zebrafish (Danio rerio). Nature Gen. 18(4):338-343.
30. Shimoda, N., E. W. Knapik, J. Ziniti, et al. (1999) Zebrafish genetic map and 2000 microsatellite markers. Genomics 58(3):219-232.
31. Barbazuk, W. B., I. Korf, C. Kadavi, et al. (2000) The syntenic relationship of the zebrafish and human genomes. Gen. Res. 10:1351-1358.
32. Postlethwait, J., M. Ekker, K. Frazer, M. Mullins and M. Westerfield. (2000) To orthologue or not to orthologue, that is the question. Zebrafish Sci. Monitor 7 (1).
33. Svoboda, K. R., A. E. Linares and A. B. Ribera (2001) Activity regulates programmed cell death of zebrafish Rohon-Beard neurons. Devel. 128:3511-3520.
34. Svoboda, K. R., S. Vijayaraghavan and R. L. Tanguay (2002) Nicotinic receptors mediate changes in spinal motoneuron development and axonal pathfinding in embryonic zebrafish exposed to nicotine. J. Neurosci. 22(24):10731-10741.
35. Liu, Y.-W. and W.-K. Chan (2002) Thyroid hormones are important for embryonic to larval transitory phase in zebrafish. Diff. 70:36-45.
36. Wittbrodt, J., A. Meyer and M. Schartl (1998) More genes in fish? Bioessays 20:511-515.
37. Holland, P. W. and N. A. Williams (1990) Conservation of engrailed-like homeobox sequences during vertebrate evolution. FEBS Letts. 277(1):250-252.
38. Ekker, S. C., A. R. Ungar, P. Greenstein, et al. (1995) Patterning activities of vertebrate hedgehog proteins in the developing eye and brain. Curr. Biol. 5(8):944-955.
39. Stock, D. W., D. L. Ellies, Z. Zhao, M. Ekker, F. H. Ruddle and K. M. Weiss. (1996) The evolution of the vertebrate Dlx family. Proc. Natl. Acad. Sci. 93:10858-10863.
40. Amores, A., Force, Y.-L. Yan, L. (1998) Zebrafish hox clusters and vertebrate genome evolution. Science 282:1711-1714.
41. Myer, A. and E. Malaga-Trillo (1999) Vertebrate genomics: more fishy tales about Hox genes. Curr. Biol. 9:R210-R213.
42. Jaillon, O., J.-M. Aury, F. Brunet, et al. (2004) Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype. Nature 431:946-957.
43. Ruddle, F. H., J. L. Bartels, K. L. Bentley, C. Kappen, M. T. Murtha and J. W. Pendleton. (1994) Evolution of Hox genes. Annu. Rev. Genet. 28:423-442.
44. Skrabanek, L. and K. H. Wolfe (1998) Eukaryote genome duplication - where's the evidence? Curr. Op. Gen. Devl. 8:694-700.
45. Hughes, M. K. and A. L. Hughes (1993) Evolution of duplicate genes in a tetraploid animal, Xenopus laevis. Mol. Biol. Evol. 10:1360-1369.
46. Robinson-Rechavi, M., O. Marchand, H. Escriva, P.-L. Bardet, S. Hughes and V. Laudet. (2001) Euteleost fish genomes are characterized by expansion of gene families. Genome Res. 11:781-788.
47. Van de Peer, Y., J. S. Taylor, J. Joseph and A. Myer. (2002) Wanda: a database of duplicated fish genes. Nuc. Acids Res. 30(1):109-112.
48. Saint-Amant, L. and P. Drapeau (1998) Time course of the development of motor behaviors in the zebrafish embryo. J. Neurobiol. 37:622-632.
49. Bate, M. (1999) Development of motor behavior. Curr. Opin. Neurobiol. 9:670-675.
50. Budick, S. A. and D. M. O'Malley (2000) Locomotor repertoire of the larval zebrafish: Swimming, turning and prey capture. J. Exp. Biol. 203:2565-2579.
51. Drapeau, P., L. Saint-Amant, R. R. Buss, M. Chong, J. R. McDearmid and E. Brustein. (2002) Development of the locomotor network in zebrafish. Prog. Neurobiol. 68:85-111.
52. Lewis, K. E. and J. S. Eisen (2003) From cells to circuits: development of the zebrafish spinal cord. Prog. Neurobiol. 69(6):419-449.
53. Metcalfe, W. K., B. Mendelson and C. B. Kimmel (1986) Segmental homologies among reticulospinal neurons in the hindbrain of the zebrafish larva. J. Comp. Neurol. 251:147-159.
54. Kimmel, C. B. (1982) Reticulospinal and vestibulospinal neurons in the young larva of a teleost fish, Brachydanio rerio. Prog. Brain. Res. 57:1-23.
55. Kimmel, C. B., K. Hatta and J. S. Eisen (1991) Genetic control of primary neuronal development in zebrafish. Devel. Suppl (2): 47-57.
56. Gahtan, E. and D. M. O'Malley (2003) Visually guided injection of identified reticulospinal neurons in zebrafish: a survey of spinal arborization patterns. J. Comp. Neurol. 459:186-200.
57. Mendelson, B. (1986) Development of reticulospinal neurons of the zebrafish. I. Time of origin. J. Comp. Neurol. 251:160-171.
58. Mendelson, B. (1985) Soma position is correlated with time of development in three types of identified reticulospinal neurons. Devel. Biol. 112:489-493.
59. Mendelson, B. and C. B. Kimmel (1986) Identified vertebrate neurons that differ in axonal projection develop together. Devl. Biol. 118(1):309-313.
60. Liu, K. and J. R. Fetcho (1999) Laser ablation reveals functional relationships of segmental hindbrain neurons in zebrafish. Neuron 23:325-335.
61. Myers, P. Z., J. S. Eisen and M. Westerfield (1986) Development and axonal outgrowth of identified motoneurons in the zebrafish. J. Neurosci. 6(8):2278-2289.
62. Hale, M. E., D. A. Ritter and J. R. Fetcho (2001) A confocal study of spinal interneurons in living larval zebrafish. J. Comp. Neurol. 437:1-16.
63. Eisen, J. S. (1991) Motoneuronal development in the embryonic zebrafish. Devel. Suppl (2): 141-147.
64. Eisen, J. S., S. H. Pike and B. Romancier (1990) An identified motoneuron with variable fates in embryonic zebrafish. J. Neurosci. 10(1):34-43.
65. Bernhardt, R. R. (1999) Cellular and Molecular bases of axonal pathfinding during embryogenesis of the fish central nervous system. J. Neurobiol. 38:137-160.
66. Granato, M., F. J. van Eeden, U. Schach, T., et al. (1996) Genes controlling and mediating locomotion behavior of the zebrafish embryo and larva. Devel. 123:399-413.
67. Beattie, C. E. (2000) Control of motor axon guidance in the zebrafish embryo. Brain Res. Bull. 53(5):489-500.
68. Zeller, J. and M. Granato (1999) The zebrafish diwanka gene controls an early step of motor growth cone migration. Devel. 126:3461-3472.
69. Zhang, J. and M. Granato (2000) The zebrafish unplugged gene controls motor axon pathfinding selection. Devel. 127:2099-2111.
70. Zhang, J., S. Malayaman, C. Davis and M. Granato. (2001) A dual role for the zebrafish unplugged gene in motor axon pathfinding and pharyngeal development. Devel. Biol. 240:560-573.
71. McWhorter, M. L., U. R. Monani, A. H. Burghes and C. E. Beattie. (2003) Knockdown of the survival motor neuron (Smn) protein in zebrafish causes defects in motor axon outgrowth and patterning. J. Cell Biol. 162(5):919-931.
72. Roberts, D. F., J. Chavez and S. D. M. Court (1970) The genetic component in child mortality. Arch. Dis. Child 45:33-38.
73. Crawford, T. O. and C. A. Pardo (1996) The neurobiology of childhood spinal muscular atrophy. Neurobiol. 3:97-110.
74. Melki, J. (1997) Spinal muscular atrophy. Curr. Opin. Neurol. 10 (381-385).
75. Terns, M. P. and R. M. Terns (2001) Macromolecular complexes: SMN-the master assembler. Curr. Biol. 11:R862-R864.
76. Rossoll, W., A. K. Kroning, U. M. Ohndorf, C. Steegborn, S. Jablonka and M. Sendtner. (2002) Specific interaction of Smn, the spinal muscular atrophy determining gene product, with hnRNP-R and gry-rbp/hnRNP-Q: a role for Smn in RNA processing in motor axons? Hum. Mol. Genet. 11:93-105.
77. Buss, R. R., C. W. Bourque and P. Drapeau (2003) Membrane properties related to the firing behavior of zebrafish motoneurons. J. Neurophysiol. 89:657-664.
78. Grinnell, A. D. (1995) Dynamics of nerve-muscle interaction in developing and mature neuromuscular junctions. Physiol. Rev. 75(4):789-834.
79. Cohen-Cory, S. (2002) The developing synapse: construction and modulation of synaptic structures and circuits. Science 298(5594):770-776.
80. Hoch, W. (2003) Molecular dissection of neuromuscular junction formation. Trends Neurosci. 26(7):67-77.
81. Chakkalakal, J. V. and B. J. Jasmin (2003) Localizing synaptic mRNAs at the neuromuscular junction: it takes more than transcription. Bioess. 25(1):25-31.
82. Westerfield, M., D. W. Liu, C. B. Kimmel and C. Walker. (1990) Pathfinding and synapse formation in a zebrafish mutant lacking functional acetylcholine receptors. Neuron 4(6):867-874.
83. Sepich, D. S., J. Wegner, S. O'Shea and M. Westerfield. (1998) An altered intron inhibits synthesis of the acetylcholine receptor alpha subunit in the paralyzed zebrafish mutant nic1. Genetics 148:361-372.
84. Ono, F., S. Higashijima, A. Shcherbatko, J. R. Fetcho and P. Brehm. (2001) Paralytic zebrafish lacking acetylcholine receptors fail to localize rapsyn clusters to the synapse. J. Neurosci. 21(15):5439-5448.
85. Sepich, D. S., R. K. Ho and M. Westerfield (1994) Autonomous expression of the nic1 acetylcholine receptor mutation in zebrafish muscle cells. Devl. Biol. 161:84-90.
86. Brent, L. J. and P. Drapeau (2002) Targeted 'knockdown' of channel expression in vivo with an antisense morpholino oligonucleotide. Neurosci. 114(2):275-278.
87. Burden, S. J., R. L. De Palma and G. S. Gottesman (1983) Crosslinking of proteins in acetylcholine receptor-rich membranes: association between the beta-subunit and the 43 kd subsynaptic protein. Cell 35:687-692.
88. Froehner, S. C., C. W. Luetje, P. B. Scotland and J. Patrick. (1990) The postsynaptic 43K protein clusters muscle nicotinic acetylcholine receptors in Xenopus oocytes. Neuron 5:403-410.
89. Gautam, M., P. G. Noakes, J. Mudd, et al. (1995) Failure of postsynaptic specialization to develop at neuromuscular junctions of rapsyn-deficient mice. Nature 377:232-236.
90. Ono, F., A. Shcherbatko, S. Higashijima, G. Mandel and P. Brehm. (2002) The zebrafish motility mutant twitch once reveals new roles for rapsyn in synaptic function. J. Neurosci. 22(15):6491-6498.
91. Grunwald, D. J., C. B. Kimmel, M. Westerfield, C. Walker and G. Streisinger. (1988) A neural degeneration mutation that spares primary neurons in the zebrafish. Devl. Biol. 126(1):115-128.
92. O'Malley, D. M., Y.-H. Kao and J. R. Fetcho (1996) Imaging the functional organization of zebrafish hindbrain segments during escape behaviors. Neuron 17:1145-1155.
93. Kimmel, C. B., R. C. Eaton and S. L. Powell (1980) Decreased fast-start performance of zebrafish larvae lacking Mauthner neurons. J. Comp. Physiol. 140:343-350.
94. Gahtan, E., N. Sankrithi, J. B. Campos and D. M. O'Malley. (2002) Evidence for a widespread brain stem escape network in larval zebrafish. J. Neurophysiol. 87:608-614.
95. Borla, M. A., B. Palecek, S. Budick and D. M. O'Malley. (2002) Prey capture by larval zebrafish: Evidence for fine axial motor control. Brain Behav. Evol. 60:207-229.
96. Ritter, D. A., D. H. Bhatt and J. R. Fetcho (2001) In vivo imaging of zebrafish reveals differences in the spinal networks for escape and swimming movements. J. Neurosci. 21(22):8956-8965.
97. Moorman, S. J. (2001) Development of sensory systems in zebrafish (Danio rerio). ILAR 42(4):292-298.
98. Bryant, J., R. J. Goodyear and G. P. Richarson (2002) Sensory organ development in the inner ear: molecular and cellular mechanisms. Brit. Med. Bull. 63:39-57.
99. Bever, M. M. and D. M. Fekete (2002) Atlas of the developing inner ear in zebrafish. Devl. Dyn. 223(4):536-543.
100. Whitfield, T. T., B. B. Riley, M. Y. Chiang and B. Phillips. (2002) Development of the zebrafish inner ear. Devl. Dyn. 223(4):427-458.
101. Whitfield, T. (2002) Zebrafish as a model for hearing and deafness. J. Neurobiol. 53:157-171.
102. Metcalfe, W. K., C. B. Kimmel and E. Schabtach (1985) Anatomy of the posterior lateral line system in young larvae of the zebrafish. J. Comp. Neurol. 233(3):377-389.
103. Trevarrow, B., D. L. Marks and C. B. Kimmel (1990) Organization of hindbrain segments in the zebrafish embryo. Neuron 4(5):669-679.
104. Kornblum, H. I., J. T. Corwin and B. Trevarrow (1990) Selective labeling of sensory hair cells and neurons in auditory, vestibular and lateral line systems by a monoclonal antibody. J. Comp. Neurol. 301:162-170.
105. Gompel, N., N. Cubedo, C. Thisse, B. Thisse, C. Dambly-Chaudiere and A. Ghysen. (2001) Pattern formation in the lateral line of zebrafish. Mech. Devl. 105(1-2):69-77.
106. Haddon, C. and J. Lewis (1996) Early ear development in the embryo of the zebrafish, Danio rerio. J. Comp. Neurol. 365(1):113-128.
107. Gompel, N., C. Dambly-Chaudiere and A. Ghysen (2001) Neuronal differences prefigure somatotopy in the zebrafish lateral line. Devl. 128:387-393.
108. Riley, B. B. and J. Moorman (2000) Development of utricular otoliths, but not saccular otoliths, is necessary for vestibular function and survival in zebrafish. J. Neurobiol. 43:329-337.
109. Malicki, J., A. F. Schier, L. Solnica-Krezel S, et al. (1996) Mutations affecting development of the zebrafish ear. Development 123:275-83.
110. Whitfield, T. T., M. Granato, F. J. M. van Eeden., et al. (1996) Mutations affecting development of the inner ear and lateral line. Development 123:241-54.
111. Price, E. R. and D. E. Fisher (2001) Sensorineural deafness and pigmentation genes: melanocytes and the Mitf transcriptional network. Neuron 30:15-18.
112. Nicolson, T., A. Rusch, R. W. Friedrich, M. Granato, J. P. Ruppersberg and C. Nüsslein-Volhard. (1998) Genetic analysis of vertebrate sensory hair cell mechanosensation: the zebrafish circler mutants. Neuron 20:271-283.
113. Ernest, S., G. J. Rauch, P. Haffter, R. Geisler, C. Petit and T. Nicolson. (2000) Mariner is defective in myosin VIIA: a zebrafish model for human hereditary deafness. Hum. Mol. Genet. 9(14):2189-2196.
114. Sollner, C., G. J. Rauch, J. Sieman, et al. Mutations in cadherin 23 affect tip links in zebrafish sensory hair cells. Nature 428:955-959.
115. Riley, B. B. and D. J. Grunwald (1996) A mutation in zebrafish affecting a localized cellular function required for normal ear development. Devl. Biol. 179:427-435.
116. Sidi, S., R. W. Friedrich and T. Nicolson (2003) NompC TRP channel required for vertebrate sensory hair cell mechanotransduction. Science 301(5629):96-99.
117. Easter, S. S. and G. N. Nicola (1996) The development of vision in the Zebrafish (Danio rerio). Devel. Biol. 180:646-663.
118. Schmitt, E. A. and J. E. Dowling (1999) Early retinal development in the zebrafish danio rerio: Light and electron microscopic analyses. J. Comp. Neurol. 404:515-536.
119. Malicki, J. (1999) Development of the retina. Methods Cell Biol. 59:273-299.
120. Hu, M. and S. S. Easter (1999) Retinal neurogenesis: the formation of the initial central patch of postmitotic cells. Dev Biol 207(2):309-321.
121. Marc, R. E. and D. Cameron (2001) A molecular phenotype atlas of the zebrafish retina. J. Neuorcytol. 30:593-654.
122. Vihtelic, T. S. and D. R. Hyde (2002) Zebrafish mutagenesis yields eye morphological mutants with retinal and lens defects. Vision Res. 42:535-540.
123. Brockerhoff, S. E., J. B. Hurley, U. Janssen-Bienhold, S. C. Neuhauss, W. Deriever and J. E. Dowling. (1995) A behavioral screen for isolating zebrafish mutants with visual system defects. Proc. Natl. Acad. Sci. 92:10545-10549.
124. Li, L. and J. E. Dowling (1997) A dominant form of inherited retinal degeneration caused by a non-photoreceptor cell-specific mutation. Proc. Natl. Acad. Sci. 94:11645-11650.
125. Neuhauss, S. C. F., O. Biehlmaier, M. W. Seeliger, et al. (1999) Genetic disorders of vision revealed by a behavioral screen of 400 essential loci in zebrafish. J. Neurosci. 19(19):8603-8615.
126. Nawrocki, L. W. (1985) Development of the neural retina in the zebrafish, Brachydanio rerio. Ph. D. Thesis - University of Oregon: Eugene.
127. Biehlmaier, O., S. C. F. Neuhauss and K. Kohler (2003) Synaptic plasticity and functionality at the cone terminal of the developing zebrafish retina. J. Neurobiol. 56(3):222-236.
128. Kay, J. N., K. C. Finger-Baier, T. Roeser, W. Staub and H. Baier. (2001) Retinal ganglion cell genesis requires lakritz, a zebrafish atonal homologue. Neuron 30:725-736.
129. Schauerte, H. E., F. J. van Eeden, C. Fricke, J. Odenthal, U. Strahle and P. Haffter. (1998) Sonic hedgehog is not required for the induction of medial floor plate cells in the zebrafish. Development 125(15):2983-2993.
130. Stenkamp, D. L., R. A. Frey, D. E. Mallory and E. E. Shupe. (2002) Embryonic retinal gene expression in sonic-you mutant zebrafish. Devl. Dyn. 225:344-350.
131. Kelsh, R. N., M. Brand, Y. J. Jiang, et al. (1996) Zebrafish pigmentation mutations and the processes of neural crest development. Development 123:369-389.
132. Neumann, C. J. and C. Nüsslein-Volhard (2000) Patterning of the zebrafish retina by a wave of sonic hedgehog activity. Science 289:2137-2139.
133. Stuermer, C. A. O. (1988) Retinotopic organization of the developing retinotectal projection in the zebrafish embryo. J. Neurosci. 8:4513-4530.
134. Burrill, J. D. and S. S. Easter (1994) Development of the retinofugal projections in the embryonic and larval zebrafish (Brachydanio rerio). J. Comp. Neurol. 346:583-600.
135. Baier, H., S. Klostermann, T. Trowe, R. O. Karlstrom, C. Nüsslein-Volhard and F. Bonhoeffer. (1996) Genetic dissection of the retinotectal projection. Devel. 123:415-425.
136. Karlstrom, R. O., T. Trowe, S. Klostermann, et al. (1996) Zebrafish mutations affecting retinotectal axon pathfinding. Devel. 123:427-438.
137. Trowe, T., S.. Klostermann, H. Baier, et al. (1996) Mutations disrupting the ordering and topographic mapping of axons in the retinotectal projection of the zebrafish, Danio rerio. Development 123:439-450.
138. Fricke, C., J. S. Lee, S. Geiger-Rudolph, F. Bonhoeffer and C. B. Chien. (2001) astray, a zebrafish roundabout homologue required for retinal axon guidance. Science 292(5516):507-510.
139. Hutson, L. D. and C. B. Chien (2002) Pathfinding and error correction by retinal axons: the role of astray robo2. Neuron 33(2):205-217.
140. Stuermer, C. A. O., B. Rohrer and H. Münz (1990) Development of the retinotectal projection in zebrafish embryos under TTX-induced neural impulse blockade. J. Neurosci. 10(11):3615-3626.
141. Malicki, J. (2000) Harnessing the power of forward genetics - analysis of neuronal diversity and patterning in the zebrafish retina. Trends Neurosci. 23:531-541.
142. Baier, H., S. Rotter and S. Korsching (1994) Connectional topography in the zebrafish olfactory system: Random positions but regular spacing of sensory neurons projecting to an individual glomerulus. Proc. Natl. Acad. Sci. 91:11646-11650.
143. Byrd, C. A. and P. C. Brunjes (1995) Organization of the olfactory system in the adult zebrafish: histological, immunohistochemical and quantitative analysis. J. Comp. Neurol. 358(2):247-259.
144. Friedrich, R. W. and S. I. Korsching (1997) Combinatorial and chemotopic odorant coding in the zebrafish olfactory bulb visualized by optical imaging. 18 (737-752).
145. Vogt, R. G., S. M. Lindsay, C. A. Byrd and M. Sun. (1997) Spatial patterns of olfactory neurons expressing specific odor receptor genes in 48-hour old embryos of zebrafish Danio Rerio. J. Exp. Biol. 200:433-443.
146. Yoshihara, Y., H. Nagao and K. Mori (2001) Sniffing out odors with multiple dendrites. Science 291(5505):835-837.
147. Hansen, A., K. Reutter and E. Zeiske (2002) Taste bud development in the zebrafish, danio rerio. Devl. Dyn. 223:483-496.
148. Yoshida, T., A. Ito, N. Matsuda and M. Mishina. (2002) Regulation by protein kinase A switching of axonal pathfinding of zebrafish olfactory sensory neurons through the olfactory-placode bulb boundary. J. Neurosci. 22(12):4964-4972.
149. Corotto, F. S., D. R. Piper, N. Chen and W. C. Michel. (1996) Voltage and Ca2+-gated currents in zebrafish olfactory receptor neurons. J. Exp. Biol. 199:1115-1126.
150. Fuss, S. H. and S. I. Korsching (2001) Odarant feature detection: activity mapping of structure response relationships in the zebrafish olfactory bulb. J. Neurosci. 21(21):8396-8407.
151. Friedrich, R. W. and G. Laurent (2001) Dynamic optimization of odor representations by slow temporal patterning of mitral cell activity. Science 291:889-894.
152. Li, L. and J. E. Dowling (2000) Disruption of the olfactoretinal centrifugal pathway may relate to the visual system defect in night blindness b mutant zebrafish. J. Neurosci. 20(5):1883-1892.
153. Sanders, L. H. and K. E. Whitlock (2003) Phenotype of the zebrafish masterblind (mbl) mutant is dependent on genetic background. Devl. Dyn. 227:291-300.
154. Ngai, J., M. M. Dowling, L. Buck, R. Axel and A. Chess. (1993) The family of genes encoding odorant receptors in the channel catfish. Cell 72:657-666.
155. Barth, A. L., N. J. Justice and J. Ngai (1996) Asynchronous onset of odorant receptor expression in the developing zebrafish olfactory system. Neuron 16:23-34.
156. Korsching, S. I., S. Argo, H. Campenhausen, R. W. Friedrich, A. Rummrich and F. Weth. (1997) Olfaction in zebrafish: what does a tiny teleost tell us. Sem. Cell Devel. Biol. 8:181-187.
157. Nicholls, J. G., A. R. Martin and B. G. Wallace (1992) From Neuron to Brain. (3 ed., Sunderland, MA: Sinauer Associates, Inc.
158. Kimmel, C. B. and M. Westerfield, Primary neurons of the zebrafish., in Signals and Sense: Local and Global Order in Perceptual Maps, G. M. Edelman, W. E. Gall and W. H. Cowan, Editors. 1990, John Wiley and Sons: New York. p. 561-588.
159. Metcalfe, W. K., P. Z. Myers, B. Trevarrow, M. B. Bass and C. B. Kimmel. (1990) Primary neurons that express the L2/HNK-1 carbohydrate during early development in the zebrafish. Development 110:491-504.
160. Kimmel, C. B., W. W. Ballard, S. R. Kimmel, B. Ullamann and T. F. Schilling. (1995) Stages of embryonic development of the zebrafish. Devel. Dyn. 203:253-310.
161. Cole, L. K. and L. S. Ross (2001) Apoptosis in the developing zebrafish embryo. Devel. Biol. 240:123-142.
162. Williams, J. A., A. Barrios, C. Gatchalian, L. Rubin, S. W. Wilson and N. Holder. (2000) Programmed cell death in zebrafish Rohon Beard neurons is influenced by TrkC1/NT-3 signaling. Devl. Biol. 226:220-230.
163. An, M., R. Luo and P. D. Henion (2002) Differentiation and maturation of zebrafish dorsal root and sympathetic ganglion neurons. J. Comp. Neurol. 446:267-275.
164. Artinger, K. B., A. B. Chitnis, M. Mercola and W. Driver. (1999) Zebrafish narrowminded suggests a genetic link between formation of neural crest and primary sensory neurons. Devl. 126(18):3969-3979.
165. Lazarov, N. E. (2002) Comparative analysis of the chemical neuroanatomy of the mammalian trigeminal ganglion and mesencephalic trigeminal nucleus. Prog. Neurobiol. 66:19-59.
166. Nasevicius, A. and S. C. Ekker (2000) Effective targeted gene 'knockdown' in zebrafish. Nature Genetics 26(2):216-220.
167. Park, H.-C., C.-H. Kim, Y.-K. Bae, et al. (2000) Analysis of upstream elements in the HuC promoter leads to establishment of transgenic zebrafish with fluorescent neurons. Devl. Biol. 227:279-293.
168. Higashijima, S.-I., M. A. Masino, G. Mandel and J. R. Fetcho. (2003) Imaging neuronal activity during zebrafish behavior with a genetically encoded calcium indicator. J. Neurophysiol. 90(6):3986-3997.
169. O'Malley, D. M., Q. Zhou and E. Gahtan (2003) Probing neural circuits in the zebrafish: a suite of optical techniques. Methods 30:49-63.