-
1
-
-
0019936907
-
Hydrogen-ion currents and intracellular pH in depolarized voltage-clamped snail neurons
-
R.C. Thomas, and R.W. Meech Hydrogen-ion currents and intracellular pH in depolarized voltage-clamped snail neurons Nature 299 1982 826 828
-
(1982)
Nature
, vol.299
, pp. 826-828
-
-
Thomas, R.C.1
Meech, R.W.2
-
2
-
-
0023718702
-
Superoxide generation by the electrogenic NADPH oxidase of human-neutrophils is limited by the movement of a compensating charge
-
L.M. Henderson, J.B. Chappell, and O.T.G. Jones Superoxide generation by the electrogenic NADPH oxidase of human-neutrophils is limited by the movement of a compensating charge Biochem J 255 1988 285 290
-
(1988)
Biochem J
, vol.255
, pp. 285-290
-
-
Henderson, L.M.1
Chappell, J.B.2
Jones, O.T.G.3
-
4
-
-
0037379781
-
Voltage-gated proton channels and other proton transfer pathways
-
T.E. Decoursey Voltage-gated proton channels and other proton transfer pathways Physiol Rev 83 2003 475 579
-
(2003)
Physiol Rev
, vol.83
, pp. 475-579
-
-
Decoursey, T.E.1
-
5
-
-
33646229810
-
A voltage sensor-domain protein is a voltage-gated proton channel
-
M. Sasaki, M. Takagi, and Y. Okamura A voltage sensor-domain protein is a voltage-gated proton channel Science 312 2006 589 592
-
(2006)
Science
, vol.312
, pp. 589-592
-
-
Sasaki, M.1
Takagi, M.2
Okamura, Y.3
-
6
-
-
33646358260
-
A voltage-gated proton-selective channel lacking the pore domain
-
I.S. Ramsey, M.M. Moran, J.H.A. Chong, and D.E. Clapham A voltage-gated proton-selective channel lacking the pore domain Nature 440 2006 1213 1216
-
(2006)
Nature
, vol.440
, pp. 1213-1216
-
-
Ramsey, I.S.1
Moran, M.M.2
Chong, J.H.A.3
Clapham, D.E.4
-
7
-
-
66149104077
-
Hv1 proton channels are required for high-level NADPH oxidase-dependent superoxide production during the phagocyte respiratory burst
-
I.S. Ramsey, E. Ruchti, J.S. Kaczmarek, and D.E. Clapham Hv1 proton channels are required for high-level NADPH oxidase-dependent superoxide production during the phagocyte respiratory burst Proc Natl Acad Sci 106 2009 7642 7647
-
(2009)
Proc Natl Acad Sci
, vol.106
, pp. 7642-7647
-
-
Ramsey, I.S.1
Ruchti, E.2
Kaczmarek, J.S.3
Clapham, D.E.4
-
10
-
-
48249143183
-
Multimeric nature of voltage-gated proton channels
-
H.P. Koch, T. Kurokawa, Y. Okochi, M. Sasaki, Y. Okamura, and H.P. Larsson Multimeric nature of voltage-gated proton channels Proc Natl Acad Sci 105 2008 9111 9116
-
(2008)
Proc Natl Acad Sci
, vol.105
, pp. 9111-9116
-
-
Koch, H.P.1
Kurokawa, T.2
Okochi, Y.3
Sasaki, M.4
Okamura, Y.5
Larsson, H.P.6
-
11
-
-
43449139690
-
The voltage-gated proton channel Hv1 has two pores, each controlled by one voltage sensor
-
F. Tombola, M.H. Ulbrich, and E.Y. Isacoff The voltage-gated proton channel Hv1 has two pores, each controlled by one voltage sensor Neuron 58 2008 546 556
-
(2008)
Neuron
, vol.58
, pp. 546-556
-
-
Tombola, F.1
Ulbrich, M.H.2
Isacoff, E.Y.3
-
12
-
-
77449143196
-
Strong cooperativity between subunits in voltage-gated proton channels
-
C. Gonzalez, H.P. Koch, B.M. Drum, and H.P. Larsson Strong cooperativity between subunits in voltage-gated proton channels Nat Struct Mol Biol 17 2010 51 56
-
(2010)
Nat Struct Mol Biol
, vol.17
, pp. 51-56
-
-
Gonzalez, C.1
Koch, H.P.2
Drum, B.M.3
Larsson, H.P.4
-
13
-
-
84892574563
-
Hydrophobic plug functions as a gate in voltage-gated proton channels
-
A. Chamberlin, F. Qiu, S. Rebolledo, Y.B. Wang, S.Y. Noskov, and H.P. Larsson Hydrophobic plug functions as a gate in voltage-gated proton channels Proc Natl Acad Sci 111 2014 E273 E282
-
(2014)
Proc Natl Acad Sci
, vol.111
, pp. 273-E282
-
-
Chamberlin, A.1
Qiu, F.2
Rebolledo, S.3
Wang, Y.B.4
Noskov, S.Y.5
Larsson, H.P.6
-
14
-
-
84878666039
-
Construction and validation of a homology model of the human voltage-gated proton channel hH(V)1
-
K. Kulleperuma, S.M.E. Smith, D. Morgan, B. Musset, J. Holyoake, and N. Chakrabarti Construction and validation of a homology model of the human voltage-gated proton channel hH(V)1 J Gen Physiol 141 2013 445 465
-
(2013)
J Gen Physiol
, vol.141
, pp. 445-465
-
-
Kulleperuma, K.1
Smith, S.M.E.2
Morgan, D.3
Musset, B.4
Holyoake, J.5
Chakrabarti, N.6
-
15
-
-
83055176497
-
Aspartate 112 is the selectivity filter of the human voltage-gated proton channel
-
B. Musset, S.M.E. Smith, S. Rajan, D. Morgan, V.V. Cherny, and T.E. DeCoursey Aspartate 112 is the selectivity filter of the human voltage-gated proton channel Nature 480 2011 273 278
-
(2011)
Nature
, vol.480
, pp. 273-278
-
-
Musset, B.1
Smith, S.M.E.2
Rajan, S.3
Morgan, D.4
Cherny, V.V.5
Decoursey, T.E.6
-
17
-
-
84855438589
-
Water wires in atomistic models of the Hvl proton channel
-
M.L. Wood, E.V. Schow, J.A. Freites, S.H. White, F. Tombola, and D.J. Tobias Water wires in atomistic models of the Hvl proton channel Bba-Biomembranes 2012 1818 286 293
-
(1818)
Bba-Biomembranes
, vol.2012
, pp. 286-293
-
-
Wood, M.L.1
Schow, E.V.2
Freites, J.A.3
White, S.H.4
Tombola, F.5
Tobias, D.J.6
-
18
-
-
84897977217
-
X-ray crystal structure of voltage-gated proton channel
-
K. Takeshita, S. Sakata, E. Yamashita, Y. Fujiwara, A. Kawanabe, and T. Kurokawa X-ray crystal structure of voltage-gated proton channel Nature 21 2014 352 357
-
(2014)
Nature
, vol.21
, pp. 352-357
-
-
Takeshita, K.1
Sakata, S.2
Yamashita, E.3
Fujiwara, Y.4
Kawanabe, A.5
Kurokawa, T.6
-
19
-
-
0027794972
-
Targeted molecular-dynamics simulation of conformational change - Application to the T[-]R transition in insulin
-
J. Schlitter, M. Engels, P. Kruger, E. Jacoby, and A. Wollmer Targeted molecular-dynamics simulation of conformational change - application to the T[-]R transition in insulin Mol Simul 10 1993 291 308
-
(1993)
Mol Simul
, vol.10
, pp. 291-308
-
-
Schlitter, J.1
Engels, M.2
Kruger, P.3
Jacoby, E.4
Wollmer, A.5
-
20
-
-
84155191394
-
The pore of the voltage-gated proton channel
-
T.K. Berger, and E.Y. Isacoff The pore of the voltage-gated proton channel Neuron 72 2011 991 1000
-
(2011)
Neuron
, vol.72
, pp. 991-1000
-
-
Berger, T.K.1
Isacoff, E.Y.2
-
21
-
-
84890139697
-
Peregrination of the selectivity filter delineates the pore of the human voltage-gated proton channel hH(V)1
-
D. Morgan, B. Musset, K. Kulleperuma, S.M.E. Smith, S. Rajan, and V.V. Cherny Peregrination of the selectivity filter delineates the pore of the human voltage-gated proton channel hH(V)1 J Gen Physiol 142 2013 625 640
-
(2013)
J Gen Physiol
, vol.142
, pp. 625-640
-
-
Morgan, D.1
Musset, B.2
Kulleperuma, K.3
Smith, S.M.E.4
Rajan, S.5
Cherny, V.V.6
-
22
-
-
83355177269
-
In search of a consensus model of the resting state of a voltage-sensing domain
-
E. Vargas, F. Bezanilla, and B. Roux In search of a consensus model of the resting state of a voltage-sensing domain Neuron 72 2011 713 720
-
(2011)
Neuron
, vol.72
, pp. 713-720
-
-
Vargas, E.1
Bezanilla, F.2
Roux, B.3
-
23
-
-
84865754444
-
Ion-controlled conformational dynamics in the outward-open transition from an occluded state of LeuT
-
C.F. Zhao, S. Stolzenberg, L. Gracia, H. Weinstein, S. Noskov, and L. Shi Ion-controlled conformational dynamics in the outward-open transition from an occluded state of LeuT Biophys J 103 2012 878 888
-
(2012)
Biophys J
, vol.103
, pp. 878-888
-
-
Zhao, C.F.1
Stolzenberg, S.2
Gracia, L.3
Weinstein, H.4
Noskov, S.5
Shi, L.6
-
24
-
-
84887289890
-
The molecular mechanism of ion-dependent gating in secondary transporters
-
C. Zhao, and S.Y. Noskov The molecular mechanism of ion-dependent gating in secondary transporters PLoS Comput Biol 9 2013 e1003296
-
(2013)
PLoS Comput Biol
, vol.9
, pp. 1003296
-
-
Zhao, C.1
Noskov, S.Y.2
-
25
-
-
84872735785
-
Subunit interactions during cooperative opening of voltage-gated proton channels
-
F. Qiu, S. Rebolledo, C. Gonzalez, and H.P. Larsson Subunit interactions during cooperative opening of voltage-gated proton channels Neuron 77 2013 288 298
-
(2013)
Neuron
, vol.77
, pp. 288-298
-
-
Qiu, F.1
Rebolledo, S.2
Gonzalez, C.3
Larsson, H.P.4
-
26
-
-
81055126297
-
On the selective ion binding hypothesis for potassium channels
-
I. Kim, and T.W. Allen On the selective ion binding hypothesis for potassium channels Proc Natl Acad Sci U S A 108 2011 17963 17968
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 17963-17968
-
-
Kim, I.1
Allen, T.W.2
-
27
-
-
77955550391
-
Ion selectivity of the KcsA channel: A perspective from multi-ion free energy landscapes
-
B. Egwolf, and B. Roux Ion selectivity of the KcsA channel: a perspective from multi-ion free energy landscapes J Mol Biol 401 2010 831 842
-
(2010)
J Mol Biol
, vol.401
, pp. 831-842
-
-
Egwolf, B.1
Roux, B.2
-
28
-
-
84896880064
-
Molecular strategies to achieve selective conductance in NaK channel variants
-
Y.B. Wang, A.C. Chamberlin, and S.Y. Noskov Molecular strategies to achieve selective conductance in NaK channel variants J Phys Chem B 118 2014 2041 2049
-
(2014)
J Phys Chem B
, vol.118
, pp. 2041-2049
-
-
Wang, Y.B.1
Chamberlin, A.C.2
Noskov, S.Y.3
-
29
-
-
68949149548
-
CHARMM-GUI membrane builder for mixed bilayers and its application to yeast membranes
-
S. Jo, J.B. Lim, J.B. Klauda, and W. Im CHARMM-GUI membrane builder for mixed bilayers and its application to yeast membranes Biophys J 97 2009 50 58
-
(2009)
Biophys J
, vol.97
, pp. 50-58
-
-
Jo, S.1
Lim, J.B.2
Klauda, J.B.3
Im, W.4
-
30
-
-
77954340928
-
Impact of distant charge reversals within a robust beta-barrel protein pore
-
M.M. Mohammad, and L. Movileanu Impact of distant charge reversals within a robust beta-barrel protein pore J Phys Chem B 114 2010 8750 8759
-
(2010)
J Phys Chem B
, vol.114
, pp. 8750-8759
-
-
Mohammad, M.M.1
Movileanu, L.2
-
31
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
J.C. Phillips, R. Braun, W. Wang, J. Gumbart, E. Tajkhorshid, and E. Villa Scalable molecular dynamics with NAMD J Comp Chem 26 2005 1781 1802
-
(2005)
J Comp Chem
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
-
32
-
-
67650500988
-
CHARMM: The biomolecular simulation program
-
B.R. Brooks, C.L. Brooks, A.D. Mackerell, L. Nilsson, R.J. Petrella, and B. Roux CHARMM: the biomolecular simulation program J Comp Chem 30 2009 1545 1614
-
(2009)
J Comp Chem
, vol.30
, pp. 1545-1614
-
-
Brooks, B.R.1
Brooks, C.L.2
Mackerell, A.D.3
Nilsson, L.4
Petrella, R.J.5
Roux, B.6
-
34
-
-
84986519238
-
The weighted histogram analysis method for free-energy calculations on biomolecules. 1. the method
-
S. Kumar, D. Bouzida, R.H. Swendsen, P.A. Kollman, and J.M. Rosenberg The weighted histogram analysis method for free-energy calculations on biomolecules. 1. The method J Comput Chem 13 1992 1011 1021
-
(1992)
J Comput Chem
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Bouzida, D.2
Swendsen, R.H.3
Kollman, P.A.4
Rosenberg, J.M.5
-
35
-
-
69349101321
-
Atomistic view of the conformational activation of Src kinase using the string method with swarms-of-trajectories
-
W.X. Gan, S.C. Yang, and B. Roux Atomistic view of the conformational activation of Src kinase using the string method with swarms-of-trajectories Biophys J 97 2009 L8 L10
-
(2009)
Biophys J
, vol.97
, pp. 8-L10
-
-
Gan, W.X.1
Yang, S.C.2
Roux, B.3
-
36
-
-
45949108535
-
Finding transition pathways using the string method with swarms of trajectories
-
A.C. Pan, D. Sezer, and B. Roux Finding transition pathways using the string method with swarms of trajectories J Phys Chem B 112 2008 3432 3440
-
(2008)
J Phys Chem B
, vol.112
, pp. 3432-3440
-
-
Pan, A.C.1
Sezer, D.2
Roux, B.3
-
37
-
-
33746255471
-
String method in collective variables: Minimum free energy paths and isocommittor surfaces
-
L. Maragliano, A. Fischer, E. Vanden-Eijnden, and G. Ciccotti String method in collective variables: minimum free energy paths and isocommittor surfaces J Chem Phys 125 2006 24106
-
(2006)
J Chem Phys
, vol.125
, pp. 24106
-
-
Maragliano, L.1
Fischer, A.2
Vanden-Eijnden, E.3
Ciccotti, G.4
-
38
-
-
84864247245
-
Analysis and elimination of a bias in targeted molecular dynamics simulations of conformational transitions: Application to calmodulin
-
V. Ovchinnikov, and M. Karplus Analysis and elimination of a bias in targeted molecular dynamics simulations of conformational transitions: application to calmodulin J Phys Chem B 116 2012 8584 8603
-
(2012)
J Phys Chem B
, vol.116
, pp. 8584-8603
-
-
Ovchinnikov, V.1
Karplus, M.2
-
39
-
-
79952096187
-
Free energy of conformational transition paths in biomolecules: The string method and its application to myosin VI
-
V. Ovchinnikov, M. Karplus, and E. Vanden-Eijnden Free energy of conformational transition paths in biomolecules: the string method and its application to myosin VI J Chem Phys 134 2011 085103
-
(2011)
J Chem Phys
, vol.134
, pp. 085103
-
-
Ovchinnikov, V.1
Karplus, M.2
Vanden-Eijnden, E.3
|