-
1
-
-
1842411320
-
Crystal structure of the nucleosome core particle at 2.8 A resolution
-
Luger K, Mäder AW, Richmond RK, Sargent DF, Richmond TJ (1997) Crystal structure of the nucleosome core particle at 2.8 A resolution. Nature 389(6648):251-260.
-
(1997)
Nature
, vol.389
, Issue.6648
, pp. 251-260
-
-
Luger, K.1
Mäder, A.W.2
Richmond, R.K.3
Sargent, D.F.4
Richmond, T.J.5
-
2
-
-
84857427738
-
Chromatin and transcription in yeast
-
Rando OJ, Winston F (2012) Chromatin and transcription in yeast. Genetics 190(2):351-387.
-
(2012)
Genetics
, vol.190
, Issue.2
, pp. 351-387
-
-
Rando, O.J.1
Winston, F.2
-
3
-
-
33845755946
-
Heterochromatin revisited
-
Grewal S I S, Jia S (2007) Heterochromatin revisited. Nat Rev Genet 8(1):35-46.
-
(2007)
Nat Rev Genet
, vol.8
, Issue.1
, pp. 35-46
-
-
Grewal, S.I.S.1
Jia, S.2
-
4
-
-
33845866637
-
H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability
-
Peng JC, Karpen GH (2007) H3K9 methylation and RNA interference regulate nucleolar organization and repeated DNA stability. Nat Cell Biol 9(1):25-35.
-
(2007)
Nat Cell Biol
, vol.9
, Issue.1
, pp. 25-35
-
-
Peng, J.C.1
Karpen, G.H.2
-
5
-
-
63449109369
-
Heterochromatic genome stability requires regulators of histone H3 K9 methylation
-
Peng JC, Karpen GH (2009) Heterochromatic genome stability requires regulators of histone H3 K9 methylation. PLoS Genet 5(3):e1000435.
-
(2009)
PLoS Genet
, vol.5
, Issue.3
, pp. e1000435
-
-
Peng, J.C.1
Karpen, G.H.2
-
6
-
-
84901470319
-
Mechanisms of functional promiscuity by HP1 proteins
-
Canzio D, Larson A, Narlikar GJ (2014) Mechanisms of functional promiscuity by HP1 proteins. Trends Cell Biol 24(6):377-386.
-
(2014)
Trends Cell Biol
, vol.24
, Issue.6
, pp. 377-386
-
-
Canzio, D.1
Larson, A.2
Narlikar, G.J.3
-
8
-
-
75149171523
-
Silent information regulator 3: The Goldilocks of the silencing complex
-
Norris A, Boeke JD (2010) Silent information regulator 3: The Goldilocks of the silencing complex. Genes Dev 24(2):115-122.
-
(2010)
Genes Dev
, vol.24
, Issue.2
, pp. 115-122
-
-
Norris, A.1
Boeke, J.D.2
-
9
-
-
80052437561
-
Structural basis for the role of the Sir3 AAA+ domain in silencing: Interaction with Sir4 and unmethylated histone H3K79
-
Ehrentraut S, et al. (2011) Structural basis for the role of the Sir3 AAA+ domain in silencing: Interaction with Sir4 and unmethylated histone H3K79. Genes Dev 25(17):1835-1846.
-
(2011)
Genes Dev
, vol.25
, Issue.17
, pp. 1835-1846
-
-
Ehrentraut, S.1
-
10
-
-
84873567117
-
Dimerization of Sir3 via its C-terminal winged helix domain is essential for yeast heterochromatin formation
-
Oppikofer M, et al. (2013) Dimerization of Sir3 via its C-terminal winged helix domain is essential for yeast heterochromatin formation. EMBO J 32(3):437-449.
-
(2013)
EMBO J
, vol.32
, Issue.3
, pp. 437-449
-
-
Oppikofer, M.1
-
11
-
-
81555212272
-
Structural basis of silencing: Sir3 BAH domain in complex with a nucleosome at 3.0 Å resolution
-
Armache K-J, Garlick JD, Canzio D, Narlikar GJ, Kingston RE (2011) Structural basis of silencing: Sir3 BAH domain in complex with a nucleosome at 3.0 Å resolution. Science 334(6058):977-982.
-
(2011)
Science
, vol.334
, Issue.6058
, pp. 977-982
-
-
Armache, K.-J.1
Garlick, J.D.2
Canzio, D.3
Narlikar, G.J.4
Kingston, R.E.5
-
12
-
-
84878129207
-
Heterochromatin protein Sir3 induces contacts between the amino terminus of histone H4 and nucleosomal DNA
-
Wang F, et al. (2013) Heterochromatin protein Sir3 induces contacts between the amino terminus of histone H4 and nucleosomal DNA. Proc Natl Acad Sci USA 110(21):8495-8500.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, Issue.21
, pp. 8495-8500
-
-
Wang, F.1
-
13
-
-
84883742201
-
The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle
-
Arnaudo N, et al. (2013) The N-terminal acetylation of Sir3 stabilizes its binding to the nucleosome core particle. Nat Struct Mol Biol 20(9):1119-1121.
-
(2013)
Nat Struct Mol Biol
, vol.20
, Issue.9
, pp. 1119-1121
-
-
Arnaudo, N.1
-
14
-
-
0032991918
-
The BAH (bromo-adjacent homology) domain: A link between DNA methylation, replication and transcriptional regulation
-
Callebaut I, Courvalin J-C, Mornon J-P (1999) The BAH (bromo-adjacent homology) domain: A link between DNA methylation, replication and transcriptional regulation. FEBS Lett 446(1):189-193.
-
(1999)
FEBS Lett
, vol.446
, Issue.1
, pp. 189-193
-
-
Callebaut, I.1
Courvalin, J.-C.2
Mornon, J.-P.3
-
15
-
-
0025002966
-
Genetic evidence for an interaction between SIR3 and histone H4 in the repression of the silent mating loci in Saccharomyces cerevisiae
-
Johnson LM, Kayne PS, Kahn ES, Grunstein M (1990) Genetic evidence for an interaction between SIR3 and histone H4 in the repression of the silent mating loci in Saccharomyces cerevisiae. Proc Natl Acad Sci USA 87(16):6286-6290.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, Issue.16
, pp. 6286-6290
-
-
Johnson, L.M.1
Kayne, P.S.2
Kahn, E.S.3
Grunstein, M.4
-
16
-
-
37349033583
-
Role of the conserved Sir3-BAH domain in nucleosome binding and silent chromatin assembly
-
Onishi M, Liou G-G, Buchberger JR, Walz T, Moazed D (2007) Role of the conserved Sir3-BAH domain in nucleosome binding and silent chromatin assembly. Mol Cell 28(6):1015-1028.
-
(2007)
Mol Cell
, vol.28
, Issue.6
, pp. 1015-1028
-
-
Onishi, M.1
Liou, G.-G.2
Buchberger, J.R.3
Walz, T.4
Moazed, D.5
-
17
-
-
70349170114
-
Reconstitution of heterochromatin-dependent transcriptional gene silencing
-
Johnson A, et al. (2009) Reconstitution of heterochromatin-dependent transcriptional gene silencing. Mol Cell 35(6):769-781.
-
(2009)
Mol Cell
, vol.35
, Issue.6
, pp. 769-781
-
-
Johnson, A.1
-
18
-
-
44949091416
-
A Rad51 presynaptic filament is sufficient to capture nucleosomal homology during recombinational repair of a DNA double-strand break
-
Sinha M, Peterson CL (2008) A Rad51 presynaptic filament is sufficient to capture nucleosomal homology during recombinational repair of a DNA double-strand break. Mol Cell 30(6):803-810.
-
(2008)
Mol Cell
, vol.30
, Issue.6
, pp. 803-810
-
-
Sinha, M.1
Peterson, C.L.2
-
19
-
-
70149105916
-
Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling
-
Sinha M, Watanabe S, Johnson A, Moazed D, Peterson CL (2009) Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling. Cell 138(6):1109-1121.
-
(2009)
Cell
, vol.138
, Issue.6
, pp. 1109-1121
-
-
Sinha, M.1
Watanabe, S.2
Johnson, A.3
Moazed, D.4
Peterson, C.L.5
-
20
-
-
43249090629
-
The HSA domain binds nuclear actin-related proteins to regulate chromatin-remodeling ATPases
-
Szerlong H, et al. (2008) The HSA domain binds nuclear actin-related proteins to regulate chromatin-remodeling ATPases. Nat Struct Mol Biol 15(5):469-476.
-
(2008)
Nat Struct Mol Biol
, vol.15
, Issue.5
, pp. 469-476
-
-
Szerlong, H.1
-
21
-
-
84886066811
-
The BAH domain of Rsc2 is a histone H3 binding domain
-
Chambers AL, Pearl LH, Oliver AW, Downs JA (2013) The BAH domain of Rsc2 is a histone H3 binding domain. Nucleic Acids Res 41(19):9168-9182.
-
(2013)
Nucleic Acids Res
, vol.41
, Issue.19
, pp. 9168-9182
-
-
Chambers, A.L.1
Pearl, L.H.2
Oliver, A.W.3
Downs, J.A.4
-
22
-
-
0042671282
-
Involvement of actin-related proteins in ATPdependent chromatin remodeling
-
Shen X, Ranallo R, Choi E, Wu C (2003) Involvement of actin-related proteins in ATPdependent chromatin remodeling. Mol Cell 12(1):147-155.
-
(2003)
Mol Cell
, vol.12
, Issue.1
, pp. 147-155
-
-
Shen, X.1
Ranallo, R.2
Choi, E.3
Wu, C.4
-
23
-
-
0030782468
-
Catalytic activity of the yeast SWI/SNF complex on reconstituted nucleosome arrays
-
Logie C, Peterson CL (1997) Catalytic activity of the yeast SWI/SNF complex on reconstituted nucleosome arrays. EMBO J 16(22):6772-6782.
-
(1997)
EMBO J
, vol.16
, Issue.22
, pp. 6772-6782
-
-
Logie, C.1
Peterson, C.L.2
-
24
-
-
84907320786
-
Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres
-
Swygert SG, et al. (2014) Solution-state conformation and stoichiometry of yeast Sir3 heterochromatin fibres. Nat Commun 5:4751.
-
(2014)
Nat Commun
, vol.5
, pp. 4751
-
-
Swygert, S.G.1
-
25
-
-
0021715020
-
Genes affecting the regulation of SUC2 gene expression by glucose repression in Saccharomyces cerevisiae
-
Neigeborn L, Carlson M (1984) Genes affecting the regulation of SUC2 gene expression by glucose repression in Saccharomyces cerevisiae. Genetics 108(4):845-858.
-
(1984)
Genetics
, vol.108
, Issue.4
, pp. 845-858
-
-
Neigeborn, L.1
Carlson, M.2
-
26
-
-
0037442819
-
SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF (II) s and the general transcription machinery
-
Sharma VM, Li B, Reese JC (2003) SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF (II) s and the general transcription machinery. Genes Dev 17(4):502-515.
-
(2003)
Genes Dev
, vol.17
, Issue.4
, pp. 502-515
-
-
Sharma, V.M.1
Li, B.2
Reese, J.C.3
-
27
-
-
79955949044
-
The specificity and topology of chromatin interaction pathways in yeast
-
Lenstra TL, et al. (2011) The specificity and topology of chromatin interaction pathways in yeast. Mol Cell 42(4):536-549.
-
(2011)
Mol Cell
, vol.42
, Issue.4
, pp. 536-549
-
-
Lenstra, T.L.1
-
28
-
-
4444257692
-
The Swi/Snf chromatin remodeling complex is required for ribosomal DNA and telomeric silencing in Saccharomyces cerevisiae
-
Dror V, Winston F (2004) The Swi/Snf chromatin remodeling complex is required for ribosomal DNA and telomeric silencing in Saccharomyces cerevisiae. Mol Cell Biol 24(18):8227-8235.
-
(2004)
Mol Cell Biol
, vol.24
, Issue.18
, pp. 8227-8235
-
-
Dror, V.1
Winston, F.2
-
29
-
-
0038799991
-
Multiple pathways of recombination induced by doublestrand breaks in Saccharomyces cerevisiae
-
Pâques F, Haber JE (1999) Multiple pathways of recombination induced by doublestrand breaks in Saccharomyces cerevisiae. Microbiol Mol Biol Rev 63(2):349-404.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, Issue.2
, pp. 349-404
-
-
Pâques, F.1
Haber, J.E.2
-
30
-
-
23044479628
-
Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair
-
Chai B, Huang J, Cairns BR, Laurent BC (2005) Distinct roles for the RSC and Swi/Snf ATP-dependent chromatin remodelers in DNA double-strand break repair. Genes Dev 19(14):1656-1661.
-
(2005)
Genes Dev
, vol.19
, Issue.14
, pp. 1656-1661
-
-
Chai, B.1
Huang, J.2
Cairns, B.R.3
Laurent, B.C.4
-
31
-
-
84868578003
-
-
Humana, New York
-
Sugawara N, Haber JE (2012) DNA Repair Protocols, Methods in Molecular Biology, ed Bjergbæk L (Humana, New York), Vol 920, pp 349-370.
-
(2012)
DNA Repair Protocols, Methods in Molecular Biology, Ed Bjergbæk L
, vol.920
, pp. 349-370
-
-
Sugawara, N.1
Haber, J.E.2
-
32
-
-
73349085934
-
An auxin-based degron system for the rapid depletion of proteins in nonplant cells
-
Nishimura K, Fukagawa T, Takisawa H, Kakimoto T, Kanemaki M (2009) An auxin-based degron system for the rapid depletion of proteins in nonplant cells. Nat Methods 6(12):917-922.
-
(2009)
Nat Methods
, vol.6
, Issue.12
, pp. 917-922
-
-
Nishimura, K.1
Fukagawa, T.2
Takisawa, H.3
Kakimoto, T.4
Kanemaki, M.5
-
33
-
-
0026584855
-
Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription
-
Peterson CL, Herskowitz I (1992) Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription. Cell 68(3):573-583.
-
(1992)
Cell
, vol.68
, Issue.3
, pp. 573-583
-
-
Peterson, C.L.1
Herskowitz, I.2
-
34
-
-
79959919987
-
Tight protein-DNA interactions favor gene silencing
-
Dubarry M, Loïodice I, Chen CL, Thermes C, Taddei A (2011) Tight protein-DNA interactions favor gene silencing. Genes Dev 25(13):1365-1370.
-
(2011)
Genes Dev
, vol.25
, Issue.13
, pp. 1365-1370
-
-
Dubarry, M.1
Loïodice, I.2
Chen, C.L.3
Thermes, C.4
Taddei, A.5
-
35
-
-
59649112785
-
The dynamic personality of TATA-binding protein
-
Auble DT (2009) The dynamic personality of TATA-binding protein. Trends Biochem Sci 34(2):49-52.
-
(2009)
Trends Biochem Sci
, vol.34
, Issue.2
, pp. 49-52
-
-
Auble, D.T.1
-
36
-
-
84893129292
-
Mot1 redistributes TBP from TATA-containing to TATAless promoters
-
Zentner GE, Henikoff S (2013) Mot1 redistributes TBP from TATA-containing to TATAless promoters. Mol Cell Biol 33(24):4996-5004.
-
(2013)
Mol Cell Biol
, vol.33
, Issue.24
, pp. 4996-5004
-
-
Zentner, G.E.1
Henikoff, S.2
-
37
-
-
79960647770
-
Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP
-
Wollmann P, et al. (2011) Structure and mechanism of the Swi2/Snf2 remodeller Mot1 in complex with its substrate TBP. Nature 475(7356):403-407.
-
(2011)
Nature
, vol.475
, Issue.7356
, pp. 403-407
-
-
Wollmann, P.1
-
38
-
-
0028897908
-
The origin recognition complex has essential functions in transcriptional silencing and chromosomal replication
-
Fox CA, Loo S, Dillin A, Rine J (1995) The origin recognition complex has essential functions in transcriptional silencing and chromosomal replication. Genes Dev 9(8):911-924.
-
(1995)
Genes Dev
, vol.9
, Issue.8
, pp. 911-924
-
-
Fox, C.A.1
Loo, S.2
Dillin, A.3
Rine, J.4
-
39
-
-
0031002795
-
Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex
-
Klemm RD, Austin RJ, Bell SP (1997) Coordinate binding of ATP and origin DNA regulates the ATPase activity of the origin recognition complex. Cell 88(4):493-502.
-
(1997)
Cell
, vol.88
, Issue.4
, pp. 493-502
-
-
Klemm, R.D.1
Austin, R.J.2
Bell, S.P.3
-
40
-
-
0037087587
-
The origin recognition complex: From simple origins to complex functions
-
Bell SP (2002) The origin recognition complex: From simple origins to complex functions. Genes Dev 16(6):659-672.
-
(2002)
Genes Dev
, vol.16
, Issue.6
, pp. 659-672
-
-
Bell, S.P.1
-
41
-
-
78650609911
-
Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication
-
Hickman MA, Rusche LN (2010) Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication. Proc Natl Acad Sci USA 107(45):19384-19389.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, Issue.45
, pp. 19384-19389
-
-
Hickman, M.A.1
Rusche, L.N.2
|