Exome-driven characterization of the cancer cell lines at the proteome level: The NCI-60 case study

Journal of Proteome Research

Volumn 13, Issue 12, 2014, Pages 5551-5560

  Karpova, Maria A ^a   Karpov, Dmitry S ^a,b   Ivanov, Mark V ^c,d   Pyatnitskiy, Mikhail A ^a   Chernobrovkin, Alexey L ^a,e   Lobas, Anna A ^c,d   Lisitsa, Andrey V ^a   Archakov, Alexander I ^a   Gorshkov, Mikhail V ^c,d   Moshkovskii, Sergei A ^a,f  

^a INSTITUTE OF BIOMEDICAL CHEMISTRY   (Russian Federation)

^b ENGELHARDT INSTITUTE OF MOLECULAR BIOLOGY   (Russian Federation)

^c SEMENOV INSTITUTE OF CHEMICAL PHYSICS   (Russian Federation)

^d MOSCOW INSTITUTE OF PHYSICS AND TECHNOLOGY   (Russian Federation)

^e KAROLINSKA INSTITUTE   (Sweden)

^f PIROGOV RUSSIAN NATIONAL RESEARCH MEDICAL UNIVERSITY   (Russian Federation)

Author keywords

cancer cell line; cancer proteomics; exome; mutant proteins; protein identification algorithm; proteome; shotgun proteomics; variant peptides

Indexed keywords

MUTANT PROTEIN; PROTEOME; PEPTIDE FRAGMENT; TUMOR MARKER;

AMINO ACID SEQUENCE; ARTICLE; CANCER CELL LINE; EXOME; HIGH THROUGHPUT SCREENING; HUMAN; HUMAN CELL; PROTEIN ANALYSIS; PROTEIN DATABASE; PROTEOMICS; SEARCH ENGINE; CHEMISTRY; GENETICS; METABOLISM; MISSENSE MUTATION; SINGLE NUCLEOTIDE POLYMORPHISM; TUMOR CELL LINE;

AMINO ACID SEQUENCE; CELL LINE, TUMOR; EXOME; HUMANS; MUTATION, MISSENSE; PEPTIDE FRAGMENTS; POLYMORPHISM, SINGLE NUCLEOTIDE; PROTEOME; TUMOR MARKERS, BIOLOGICAL;

EID: 84915758530     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr500531x     Document Type: Article

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