Mass spectrum sequential subtraction speeds up searching large peptide MS/MS spectra datasets against large nucleotide databases for proteogenomics

Genes to Cells

Volumn 17, Issue 8, 2012, Pages 633-644

  Helmy, Mohamed ^a   Sugiyama, Naoyuki ^a   Tomita, Masaru ^a   Ishihama, Yasushi ^a,b  

^a KEIO UNIVERSITY   (Japan)

^b KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; CONTROLLED STUDY; FALSE POSITIVE RESULT; GENOMICS; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; MASS SPECTRUM SEQUENTIAL SUBTRACTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT CELL CULTURE; PRIORITY JOURNAL; PROTEIN DATABASE; PROTEOMICS;

BASE SEQUENCE; CELLS, CULTURED; CHROMATOGRAPHY, LIQUID; COMPUTATIONAL BIOLOGY; DATABASES, NUCLEIC ACID; DATABASES, PROTEIN; GENES, PLANT; GENOMICS; MASS SPECTROMETRY; ORYZA SATIVA; PLANT CELLS; PROTEOMICS; SEARCH ENGINE; SENSITIVITY AND SPECIFICITY; SEQUENCE ANALYSIS, PROTEIN; TIME FACTORS;

EID: 84864302486     PISSN: 13569597     EISSN: 13652443     Source Type: Journal    
DOI: 10.1111/j.1365-2443.2012.01615.x     Document Type: Article

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