Dynamic multi-coil technique (DYNAMITE) shimming for echo-planar imaging of the human brain at 7 Tesla

NeuroImage

Volumn 105, Issue , 2015, Pages 462-472

  Juchem, Christoph ^a   Umesh Rudrapatna, S ^a   Nixon, Terence W ^a   de Graaf, Robin A ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Dynamic shimming; Echo planar imaging (EPI); EPI artifacts; Multi coil; Shimming; Spherical harmonics

Indexed keywords

ADULT; ARTICLE; ARTIFACT; CONTROLLED STUDY; DYNAMIC MULTI COIL TECHNIQUE; ECHO PLANAR IMAGING; FEMALE; HUMAN; IMAGE ANALYSIS; IMAGE QUALITY; IN VIVO STUDY; LATERAL BRAIN VENTRICLE; MAGNETIC FIELD; MALE; NEUROIMAGING; NORMAL HUMAN; NUCLEAR MAGNETIC RESONANCE IMAGING; PARIETAL LOBE; PREFRONTAL CORTEX; TEMPORAL LOBE; ANATOMY AND HISTOLOGY; BRAIN; DEVICES; IMAGE PROCESSING; MIDDLE AGED; PROCEDURES;

ADULT; BRAIN; ECHO-PLANAR IMAGING; FEMALE; HUMANS; IMAGE PROCESSING, COMPUTER-ASSISTED; MALE; MIDDLE AGED;

EID: 84914814931     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2014.11.011     Document Type: Article

References (50)

1. Andersson J.L., Skare S., Ashburner J. How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging. NeuroImage 2003, 20:870-888.
2. Avdievich N.I. Transceiver-phased arrays for human brain studies at 7T. Appl. Magn. Reson. 2011, 41:483-506.
3. Barmet C., De Zanche N., Pruessmann K.P. Spatiotemporal magnetic field monitoring for MR. Magn. Reson. Med. 2008, 60:187-197.
4. Basser P.J., Jones D.K. Diffusion-tensor MRI: theory, experimental design and data analysis - a technical review. NMR Biomed. 2002, 15:456-467.
5. Blamire A.M., Rothman D.L., Nixon T. Dynamic shim updating: a new approach towards optimized whole brain shimming. Magn. Reson. Med. 1996, 36:159-165.
6. Cusack R., Brett M., Osswald K. An evaluation of the use of magnetic field maps to undistort echo-planar images. NeuroImage 2003, 18:127-142.
7. Deichmann R., Gottfried J.A., Hutton C., Turner R. Optimized EPI for fMRI studies of the orbitofrontal cortex. NeuroImage 2003, 19:430-441.
8. Fernandez-Seara M.A., Wehrli F.W. Postprocessing technique to correct for background gradients in image-based R*(2) measurements. Magn. Reson. Med. 2000, 44:358-366.
9. Frahm J., Merboldt K.D., Hanicke W. Direct FLASH MR imaging of magnetic field inhomogeneities by gradient compensation. Magn. Reson. Med. 1988, 6:474-480.
10. Greengard L., Lee J.-Y. Accelerating the nonuniform fast Fourier transform. SIAM J. Appl. Math. 2004, 46:443-454.
11. Hains A.B., Arnsten A.F. Molecular mechanisms of stress-induced prefrontal cortical impairment: implications for mental illness. Learn. Mem. 2008, 15:551-564.
12. Han H., Song A.W., Truong T.K. Integrated parallel reception, excitation, and shimming (iPRES). Magn. Reson. Med. 2013, 70:241-247.
13. Harris C.T., Handler W.B., Chronik B.A. A new approach to shimming: The dynamically controlled adaptive current network. Magn. Reson. Med. 2013, 71:859-869.
14. 0 corrected single voxel spectroscopy using volumetric navigators. Magn. Reson. Med. 2011, 66:314-323.
15. Jbabdi S., Johansen-Berg H. Tractography: where do we go from here?. Brain Connect. 2011, 1:169-183.
16. Jenkinson M., Beckmann C.F., Behrens T.E., Woolrich M.W., Smith S.M. FSL. NeuroImage 2012, 62:782-790.
17. Jezzard P. Correction of geometric distortion in fMRI data. NeuroImage 2012, 62:648-651.
18. Jezzard P., Balaban R.S. Correction for geometric distortion in echo planar images from B0 field variations. Magn. Reson. Med. 1995, 34:65-73.
19. Jezzard P., Clare S. Sources of distortion in functional MRI data. Hum. Brain Mapp. 1999, 8:80-85.
20. Juchem C., Nixon T.W., Diduch P., Rothman D.L., Starewicz P., de Graaf R.A. Dynamic shimming of the human brain at 7 Tesla. Concepts Magn. Reson. 2010, 37B:116-128.
21. Juchem C., Nixon T.W., McIntyre S., Rothman D.L., de Graaf R.A. Magnetic field homogenization of the human prefrontal cortex with a set of localized electrical coils. Magn. Reson. Med. 2010, 63:171-180.
22. Juchem C., Nixon T.W., McIntyre S., Rothman D.L., de Graaf R.A. Magnetic field modeling with a set of individual localized coils. J. Magn. Reson. 2010, 204:281-289.
23. Juchem C., Brown P.B., Nixon T.W., McIntyre S., Rothman D.L., de Graaf R.A. Multi-coil shimming of the mouse brain. Magn. Reson. Med. 2011, 66:893-900.
24. Juchem C., Nixon T.W., McIntyre S., Boer V.O., Rothman D.L., de Graaf R.A. Dynamic multi-coil shimming of the human brain at 7 Tesla. J. Magn. Reson. 2011, 212:280-288.
25. Juchem C., Nixon T.W., de Graaf R.A. Multi-coil imaging with algebraic reconstruction. Proc ISMRM, Melbourne, Australia 2012, 2545.
26. Juchem C., Green D., de Graaf R.A. Multi-coil magnetic field modeling. J. Magn. Reson. 2013, 236:95-104.
27. Juchem C., Herman P., Sanganahalli B.G., Nixon T.W., Brown P.B., McIntyre S., Hyder F., de Graaf R.A. Dynamic multi-coil technique (DYNAMITE) shimmed EPI of the rat brain at 11.7 Tesla. NMR Biomed. 2014, 27:897-906.
28. Juchem C., Nahhass O.M., Nixon T.W., de Graaf R.A. 3D MR imaging with the dynamic multi-coil technique: DYNAMITE MRI. Proc ISMRM, Milan, Italy 2014, 0930.
29. Koch K.M., McIntyre S., Nixon T.W., Rothman D.L., de Graaf R.A. Dynamic shim updating on the human brain. J. Magn. Reson. 2006, 180:286-296.
30. Le Bihan D. Looking into the functional architecture of the brain with diffusion MRI. Nat. Rev. Neurosci. 2003, 4:469-480.
31. Levy R., Goldman-Rakic P.S. Segregation of working memory functions within the dorsolateral prefrontal cortex. Exp. Brain Res. 2000, 133:23-32.
32. Mangin J.F., Fillard P., Cointepas Y., Le Bihan D., Frouin V., Poupon C. Toward global tractography. NeuroImage 2013, 80:290-296.
33. Mason G.F., Harshbarger T., Hetherington H.P., Zhang Y., Pohost G.M., Twieg D.B. A method to measure arbitrary k-space trajectories for rapid MR imaging. Magn. Reson. Med. 1997, 38:492-496.
34. Miller E.K., Freedman D.J., Wallis J.D. The prefrontal cortex: categories, concepts and cognition. Philos. Trans. R. Soc. Lond. B Biol. Sci. 2002, 357:1123-1136.
35. Morgan P.S., Bowtell R.W., McIntyre D.J., Worthington B.S. Correction of spatial distortion in EPI due to inhomogeneous static magnetic fields using the reversed gradient method. J. Magn. Reson. Imaging 2004, 19:499-507.
36. Morrell G., Spielman D. Dynamic shimming for multi-slice magnetic resonance imaging. Magn. Reson. Med. 1997, 38:477-483.
37. Ogawa S., Lee T.M., Kay A.R., Tank D.W. Brain magnetic resonance imaging with contrast dependent on blood oxygenation. Proc. Natl. Acad. Sci. U. S. A. 1990, 87:9868-9872.
38. Pan J.W., Lo K.M., Hetherington H.P. Role of high order and degree B(0) shimming for spectroscopic imaging of the human brain at 7 Tesla. Magn. Reson. Med. 2012, 68:1007-1017.
39. Robson M.D., Gore J.C., Constable R.T. Measurement of the point spread function in MRI using constant time imaging. Magn. Reson. Med. 1997, 38:733-740.
40. Rudrapatna S.U., Nixon W.T., McIntyre S., de Graaf R.A., Juchem C. Improved EPI at 7T with dynamic multi-coil technique (DYNAMITE) shimming. Proc ISMRM, Melbourne, Australia 2014, 0931.
41. Sigala N., Logothetis N.K. Visual categorization shapes feature selectivity in the primate temporal cortex. Nature 2002, 415:318-320.
42. Smith S.M. Fast robust automated brain extraction. Hum. Brain Mapp. 2002, 17:143-155.
43. Speck O., Stadler J., Zaitsev M. High resolution single-shot EPI at 7T. MAGMA 2008, 21:73-86.
44. van Gelderen P., de Zwart J.A., Starewicz P., Hinks R.S., Duyn J.H. Real-time shimming to compensate for respiration-induced B0 fluctuations. Magn. Reson. Med. 2007, 57:362-368.
45. Van Paesschen W. Qualitative and quantitative imaging of the hippocampus in mesial temporal lobe epilepsy with hippocampal sclerosis. Neuroimaging Clin. N. Am. 2004, 14:373-400. [vii].
46. Ward H.A., Riederer S.J., Jack C.R. Real-time autoshimming for echo planar timecourse imaging. Magn. Reson. Med. 2002, 48:771-780.
47. Weiskopf N., Klose U., Birbaumer N., Mathiak K. Single-shot compensation of image distortions and BOLD contrast optimization using multi-echo EPI for real-time fMRI. NeuroImage 2005, 24:1068-1079.
48. Yablonskiy D.A., Haacke E.M. Theory of NMR signal behavior in magnetically inhomogeneous tissues: the static dephasing regime. Magn. Reson. Med. 1994, 32:749-763.
49. Zaitsev M., Hennig J., Speck O. Point spread function mapping with parallel imaging techniques and high acceleration factors: fast, robust, and flexible method for echo-planar imaging distortion correction. Magn. Reson. Med. 2004, 52:1156-1166.
50. Zeng H., Constable R.T. Image distortion correction in EPI: comparison of field mapping with point spread function mapping. Magn. Reson. Med. 2002, 48:137-146.