Using synthetic peptides to benchmark peptide identification software and search parameters for MS/MS data analysis

EuPA Open Proteomics

Volumn 5, Issue , 2014, Pages 21-31

  Quandt, Andreas ^a   Espona, Lucia ^a,b   Balasko, Akos ^c   Weisser, Hendrik ^a   Brusniak, Mi Youn ^d   Kunszt, Peter ^b,e   Aebersold, Ruedi ^a,e   Malmström, Lars ^a,e  

^a ETH ZURICH   (Switzerland)

^b Systems Biology IT (SyBIT) SystemsXch   (Switzerland)

^c INSTITUTE FOR COMPUTER SCIENCE AND CONTROL   (Hungary)

^d INSTITUTE FOR SYSTEMS BIOLOGY   (United States)

^e UNIVERSITY OF ZURICH   (Switzerland)

Author keywords

Classical database search; Data analysis; Mass spectrometry; Search engine; Synthetic peptides

Indexed keywords

SYNTHETIC PEPTIDE;

AMINO ACID SEQUENCE; ARTICLE; COMPUTER PROGRAM; HUMAN; PEPTIDE ANALYSIS; PROCESS OPTIMIZATION; SEARCH ENGINE; SENSITIVITY AND SPECIFICITY; TANDEM MASS SPECTROMETRY; WORKFLOW;

EID: 84911189089     PISSN: None     EISSN: 22129685     Source Type: Journal    
DOI: 10.1016/j.euprot.2014.10.001     Document Type: Article

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