A single-tube multiple-locus variable-number tandem-repeat analysis of Mycoplasma pneumoniae clinical specimens by use of multiplex PCR-capillary electrophoresis

Journal of Clinical Microbiology

Volumn 52, Issue 12, 2014, Pages 4168-4171

  Yan, Chao ^a   Sun, Hongmei ^a   Xue, Guanhua ^a   Zhao, Hanqing ^a   Wang, Liqiong ^a   Feng, Yanling ^a   Li, Shaoli ^a  

^a CAPITAL INSTITUTE OF PEDIATRICS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; MACROLIDE; RNA 23S;

ANTIBIOTIC RESISTANCE; ARTICLE; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; CAPILLARY ELECTROPHORESIS; CHILD; CHINA; CONTROLLED STUDY; EPIDEMIC; FEMALE; FLUORESCENCE ANALYSIS; GENE AMPLIFICATION; GENOME SIZE; GENOTYPE; GENOTYPING TECHNIQUE; HUMAN; INFANT; MAJOR CLINICAL STUDY; MALE; MULTIPLE LOCUS VARIABLE NUMBER TANDEM REPEAT ANALYSIS; MULTIPLEX POLYMERASE CHAIN REACTION; MYCOPLASMA PNEUMONIA; MYCOPLASMA PNEUMONIAE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRESCHOOL CHILD; REAL TIME POLYMERASE CHAIN REACTION; RESPIRATORY TRACT INFECTION; SCHOOL CHILD; VARIABLE NUMBER OF TANDEM REPEAT; CLASSIFICATION; GENETICS; MICROBIOLOGY; MOLECULAR TYPING; PNEUMONIA, MYCOPLASMA; PROCEDURES; RESPIRATORY SYSTEM;

CHILD; CHILD, PRESCHOOL; CHINA; ELECTROPHORESIS, CAPILLARY; FEMALE; HUMANS; INFANT; MALE; MINISATELLITE REPEATS; MOLECULAR TYPING; MULTIPLEX POLYMERASE CHAIN REACTION; MYCOPLASMA PNEUMONIAE; PNEUMONIA, MYCOPLASMA; RESPIRATORY SYSTEM;

EID: 84910126180     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02178-14     Document Type: Article

References (20)

1. Waites KB, Talkington DF. 2004. Mycoplasma pneumoniae and its role as a human pathogen. Clin. Microbiol. Rev. 17:697-728. http://dx.doi.org/10.1128/CMR.17.4.697-728.2004.
2. Lenglet A, Herrador Z, Magiorakos AP, Leitmeyer K, Coulombier D. 2012. Surveillance status and recent data for Mycoplasma pneumoniae infections in the European Union and European Economic Area. Euro Surveill. 17:20075. http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=20075.
3. Thurman KA, Walter ND, Schwartz SB, Mitchell SL, Dillon MT, Baughman AL, Deutscher M, Fulton JP, Tongren JE, Hicks LA, Winchell JM. 2009. Comparison of laboratory diagnostic procedures for detection of Mycoplasma pneumoniae in community outbreaks. Clin. Infect. Dis. 48:1244-1249. http://dx.doi.org/10.1086/597775.
4. Sulyok KM, Kreizinger Z, Fekete L, Jánosi Schweitzer SN, Turcsányi I, Makrai L, Erdélyi K, Gyuranecz M. 2014. Phylogeny of Mycoplasma bovis isolates from Hungary based on multi locus sequence typing and multiplelocus variable-number tandem repeat analysis. BMC Vet. Res. 10:108. http://dx.doi.org/10.1186/1746-6148-10-108.
5. Chung S, Yi J, Jang MH, Joo SI, Ra EK, Kim SY, Chang CL, Park SS, Kim EC. 2012. Comparison of modified multiple-locus variable-number tandem-repeat fingerprinting with pulsed-field gel electrophoresis for typing clinical isolates of Staphylococcus aureus. Ann. Lab Med. 32:50-56. http://dx.doi.org/10.3343/alm.2012.32.1.50.
6. Dewaele I, Rasschaert G, Bertrand S, Wildemauwe C, Wattiau P, Imberechts H, Herman L, Ducatelle R, De Reu K, Heyndrickx M. 2012. Molecular characterization of Salmonella Enteritidis: comparison of an optimized multi-locus variable-number of tandem repeat analysis (MLVA) and pulsed-field gel electrophoresis. Foodborne Pathog. Dis. 9:885-895. http://dx.doi.org/10.1089/fpd.2012.1199.
7. Sintchenko V, Wang Q., Howard P, Ha CW, Kardamanidis K, Musto J, Gilbert GL. 2012. Improving resolution of public health surveillance for human Salmonella enterica serovar Typhimurium infection: 3 years of prospective multiple-locus variable-number tandem-repeat analysis (MLVA). BMC Infect. Dis. 12:78. http://dx.doi.org/10.1186/1471-2334-12-78.
8. Elberse KEM, Nunes S, Sá-Leão R, van der Heide RHGJ, Schouls LM. 2011. Multiple-locus variable number tandem repeat analysis for Streptococcus pneumoniae: comparison with PFGE and MLST. PLoS One 6:e19668. http://dx.doi.org/10.1371/journal.pone.0019668.
9. Dégrange S, Cazanave C, Charron A, Renaudin H, Bébéar C, Bébéar CM. 2009. Development of multiple-locus variable-number tandemrepeat analysis for molecular typing of Mycoplasma pneumoniae. J. Clin. Microbiol. 47:914-923. http://dx.doi.org/10.1128/JCM.01935-08.
10. Chalker VJ, Stocki T, Mentasti M, Fleming D, Harrison TG. 2011. Increased incidence of Mycoplasma pneumoniae infection in England and Wales in 2010: multilocus variable number tandem repeat analysis typing and macrolide susceptibility. Euro Surveill. 16:19865. http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=19865.
11. Chalker VJ, Stocki T, Litt D, Bermingham A, Watson J, Fleming DM, Harrison TG. 2012. Increased detection of Mycoplasma pneumoniae infection in children in England and Wales, October 2011 to January 2012. Euro Surveill. 17:20081. http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=20081.
12. Pereyre S, Charron A, Hidalgo-Grass C, Touati A, Moses AE, Nir-Paz R, Bébéar C. 2012. The spread of Mycoplasma pneumoniae is polyclonal in both an endemic setting in France and in an epidemic setting in Israel. PLoS One 7:e38585. http://dx.doi.org/10.1371/journal.pone.0038585.
13. Benitez AJ, Diaz MH, Wolff BJ, Pimentel G, Njenga MK, Estevez A, Winchell JM. 2012. Multilocus variable-number tandem-repeat analysis of Mycoplasma pneumoniae clinical isolates from 1962 to the present: a retrospective study. J. Clin. Microbiol. 50:3620-3626. http://dx.doi.org/10.1128/JCM.01755-12.
14. Zhao F, Liu G, Cao B, Wu J, Gu Y, He L, Meng F, Zhu L, Yin Y, Lv M, Zhang J. 2013. Multiple-locus variable-number tandem-repeat analysis of 201 Mycoplasma pneumoniae isolates from Beijing in 2008 to 2011. J. Clin. Microbiol. 51:636-639. http://dx.doi.org/10.1128/JCM.02567-12.
15. Liu Y, Ye X, Zhang H, Xu X, Wang M. 2012. Multiclonal origin of macrolide-resistant Mycoplasma pneumoniae isolates as determined by multilocus variable-number tandem-repeat analysis. J. Clin. Microbiol. 50:2793-2795. http://dx.doi.org/10.1128/JCM.00678-12.
16. Dumke R, Jacobs E. 2011. Culture-independent multi-locus variablenumber tandem-repeat analysis (MLVA) of Mycoplasma pneumoniae. J. Microbiol. Methods. 86:393-396. http://dx.doi.org/10.1016/j.mimet.2011.06.008.
17. Sun H, Xue G, Yan C, Li S, Cao L, Yuan Y, Zhao H, Feng Y, Wang L, Fan Z. 2013. Multiple-locus variable-number tandem-repeat analysis of Mycoplasma pneumoniae clinical specimens and proposal for amendment of MLVA nomenclature. PLoS One 8:e64607. http://dx.doi.org/10.1371/journal.pone.0064607.
18. Dumke R, Von Baum H, Lück PC, Jacobs E. 2010. Subtypes and variants of Mycoplasma pneumoniae: local and temporal changes in Germany 2003-2006 and absence of a correlation between the genotype in the respiratory tract and the occurrence of genotype-specific antibodies in the sera of infected patients. Epidemiol. Infect. 138:1829-1837. http://dx.doi.org/10.1017/S0950268810000622.
19. Lin C, Li S, Sun H, Zhao H, Feng Y, Cao L, Yuan Y, Zhang T. 2010. Nested PCR-linked capillary electrophoresis and single-strand conformation polymorphisms for detection of macrolide-resistant Mycoplasma pneumoniae in Beijing, China. J. Clin. Microbiol. 12:4567-4572. http://dx.doi.org/10.1128/JCM.00400-10.
20. Qu J, Yu X, Liu Y, Yin Y, Gu L, Cao B, Wang C. 2013. Specific multilocus variable-number tandem-repeat analysis genotypes of Mycoplasma pneumoniae are associated with diseases severity and macrolide susceptibility. PLoS One 8:e82174. http://dx.doi.org/10.1371/journal.pone.0082174.