-
1
-
-
3442876969
-
Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
-
Andersen C.L., Jensen J.L., Orntoft T.F. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res. 2004, 64:5245-5250.
-
(2004)
Cancer Res.
, vol.64
, pp. 5245-5250
-
-
Andersen, C.L.1
Jensen, J.L.2
Orntoft, T.F.3
-
2
-
-
77949269457
-
Gene expression profiling - clusters of possibilities
-
Bergkvist A., Rusnakova V., Sindelka R., Garda J.M.A., Sjogreen B., Lindh D., Forootan A., Kubista M. Gene expression profiling - clusters of possibilities. Methods 2010, 50:323-335.
-
(2010)
Methods
, vol.50
, pp. 323-335
-
-
Bergkvist, A.1
Rusnakova, V.2
Sindelka, R.3
Garda, J.M.A.4
Sjogreen, B.5
Lindh, D.6
Forootan, A.7
Kubista, M.8
-
3
-
-
0032120206
-
Evaluation of Pleurotus species for wheat-straw biopulping
-
Camarero S., Barrasa J.M., Pelayo M., Martínez A.T. Evaluation of Pleurotus species for wheat-straw biopulping. J. Pulp Paper Sci. 1998, 24:197-203.
-
(1998)
J. Pulp Paper Sci.
, vol.24
, pp. 197-203
-
-
Camarero, S.1
Barrasa, J.M.2
Pelayo, M.3
Martínez, A.T.4
-
4
-
-
84864098084
-
Transcriptional and enzymatic profiling of Pleurotus ostreatus laccase genes in submerged and solid-state fermentation cultures
-
Castanera R., Pérez G., Omarini A., Alfaro M., Pisabarro A.G., Faraco V., Amore A., Ramírez L. Transcriptional and enzymatic profiling of Pleurotus ostreatus laccase genes in submerged and solid-state fermentation cultures. Appl. Environ. Microbiol. 2012, 78:4037-4045.
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 4037-4045
-
-
Castanera, R.1
Pérez, G.2
Omarini, A.3
Alfaro, M.4
Pisabarro, A.G.5
Faraco, V.6
Amore, A.7
Ramírez, L.8
-
5
-
-
84883506582
-
Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity
-
Castanera R., Omarini A., Santoyo F., Pérez G., Pisabarro A.G., Ramírez L. Non-additive transcriptional profiles underlie dikaryotic superiority in Pleurotus ostreatus laccase activity. PLoS ONE 2013, 8:9.
-
(2013)
PLoS ONE
, vol.8
, pp. 9
-
-
Castanera, R.1
Omarini, A.2
Santoyo, F.3
Pérez, G.4
Pisabarro, A.G.5
Ramírez, L.6
-
7
-
-
0036222209
-
Biotechnological applications and potential of wood-degrading mushrooms of the genus Pleurotus
-
Cohen R., Persky L., Hadar Y. Biotechnological applications and potential of wood-degrading mushrooms of the genus Pleurotus. Appl. Microbiol. Biotechnol. 2002, 58:582-594.
-
(2002)
Appl. Microbiol. Biotechnol.
, vol.58
, pp. 582-594
-
-
Cohen, R.1
Persky, L.2
Hadar, Y.3
-
8
-
-
1842854104
-
2+ alters peroxidase profiles and lignin degradation by the white-rot fungus Pleurotus ostreatus under different nutritional and growth conditions
-
2+ alters peroxidase profiles and lignin degradation by the white-rot fungus Pleurotus ostreatus under different nutritional and growth conditions. Appl. Biochem. Biotechnol. 2002, 102:415-429.
-
(2002)
Appl. Biochem. Biotechnol.
, vol.102
, pp. 415-429
-
-
Cohen, R.1
Persky, L.2
Hazan-Eitan, Z.3
Yarden, C.4
Hadar, Y.5
-
9
-
-
0024676158
-
Physical and enzymatic properties of lignin peroxidase isoenzymes from Phanerochaete chrysosporium
-
Farrell R.L., Murtagh K.E., Tien M., Mozuch M.D., Kirk K.T. Physical and enzymatic properties of lignin peroxidase isoenzymes from Phanerochaete chrysosporium. Enzyme Microb. Technol. 1989, 11:322-328.
-
(1989)
Enzyme Microb. Technol.
, vol.11
, pp. 322-328
-
-
Farrell, R.L.1
Murtagh, K.E.2
Tien, M.3
Mozuch, M.D.4
Kirk, K.T.5
-
10
-
-
84859466995
-
Comparative genomics of Ceriporiopisis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis
-
Fernández-Fueyo E., Ruiz-Dueñas F.J., Ferreira P., Floudas D., Hibbett D.S., Canessa P., Larrondo L., James T.Y., Seelenfreund D., Lobos S., Polanco R., Tello M., Honda Y., Watanabe T., Watanabe T., Ryu J.S., Kubicek C.P., Schmoll M., Gaskell J., Hammel K.E., St.John F.J., Vanden Wymelenberg A., Sabat G., Bondurant S.S., Syed K., Yadav J., Doddapaneni H., Subramanian V., Lavín J.L., Oguiza J.A., Perez G., Pisabarro A.G., Ramírez L., Santoyo F., Master E., Coutinho P.M., Henrissat B., Lombard V., Magnuson J.K., Kües U., Hori C., Igarashi K., Samejima M., Held B.W., Barry K., LaButti K., Lapidus A., Lindquist E., Lucas S., Riley R., Salamov A., Hoffmeister D., Schwenk D., Hadar Y., Yarden O., de Vries R.P., Wiebenga A., Stenlid J., Eastwood D.C., Grigoriev I.V., Berka R., Blanchette R.A., Kersten P., Martínez A.T., Vicuña R., Cullen D. Comparative genomics of Ceriporiopisis subvermispora and Phanerochaete chrysosporium provide insight into selective ligninolysis. Proc. Natl. Acad. Sci. USA 2012, 109:5458-5463.
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 5458-5463
-
-
Fernández-Fueyo, E.1
Ruiz-Dueñas, F.J.2
Ferreira, P.3
Floudas, D.4
Hibbett, D.S.5
Canessa, P.6
Larrondo, L.7
James, T.Y.8
Seelenfreund, D.9
Lobos, S.10
Polanco, R.11
Tello, M.12
Honda, Y.13
Watanabe, T.14
Watanabe, T.15
Ryu, J.S.16
Kubicek, C.P.17
Schmoll, M.18
Gaskell, J.19
Hammel, K.E.20
St.John, F.J.21
Vanden Wymelenberg, A.22
Sabat, G.23
Bondurant, S.S.24
Syed, K.25
Yadav, J.26
Doddapaneni, H.27
Subramanian, V.28
Lavín, J.L.29
Oguiza, J.A.30
Perez, G.31
Pisabarro, A.G.32
Ramírez, L.33
Santoyo, F.34
Master, E.35
Coutinho, P.M.36
Henrissat, B.37
Lombard, V.38
Magnuson, J.K.39
Kües, U.40
Hori, C.41
Igarashi, K.42
Samejima, M.43
Held, B.W.44
Barry, K.45
LaButti, K.46
Lapidus, A.47
Lindquist, E.48
Lucas, S.49
Riley, R.50
Salamov, A.51
Hoffmeister, D.52
Schwenk, D.53
Hadar, Y.54
Yarden, O.55
de Vries, R.P.56
Wiebenga, A.57
Stenlid, J.58
Eastwood, D.C.59
Grigoriev, I.V.60
Berka, R.61
Blanchette, R.A.62
Kersten, P.63
Martínez, A.T.64
Vicuña, R.65
Cullen, D.66
more..
-
11
-
-
84893370794
-
Ligninolytic peroxidase genes in the oyster mushroom genome: heterologous expression, molecular structure, catalytic and stability properties and lignin-degrading ability
-
Fernández-Fueyo E., Ruiz-Dueñas F.J., Martínez M.J., Romero A., Hammel K.E., Medrano F.J., Martínez A.T. Ligninolytic peroxidase genes in the oyster mushroom genome: heterologous expression, molecular structure, catalytic and stability properties and lignin-degrading ability. Biotechnol. Biofuels 2014, 7:2.
-
(2014)
Biotechnol. Biofuels
, vol.7
, pp. 2
-
-
Fernández-Fueyo, E.1
Ruiz-Dueñas, F.J.2
Martínez, M.J.3
Romero, A.4
Hammel, K.E.5
Medrano, F.J.6
Martínez, A.T.7
-
12
-
-
84862977387
-
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
-
Floudas D., Binder M., Riley R., Barry K., Blanchette R.A., Henrissat B., Martínez A.T., Otillar R., Spatafora J.W., Yadav J.S., Aerts A., Benoit I., Boyd A., Carlson A., Copeland A., Coutinho P.M., de Vries R.P., Ferreira P., Findley K., Foster B., Gaskell J., Glotzer D., Górecki P., Heitman J., Hesse C., Hori C., Igarashi K., Jurgens J.A., Kallen N., Kersten P., Kohler A., Kües U., Kumar T.K.A., Kuo A., LaButti K., Larrondo L.F., Lindquist E., Ling A., Lombard V., Lucas S., Lundell T., Martin R., McLaughlin D.J., Morgenstern I., Morin E., Murat C., Nolan M., Ohm R.A., Patyshakuliyeva A., Rokas A., Ruiz-Dueñas F.J., Sabat G., Salamov A., Samejima M., Schmutz J., Slot J.C., St John F., Stenlid J., Sun H., Sun S., Syed K., Tsang A., Wiebenga A., Young D., Pisabarro A., Eastwood D.C., Martin F., Cullen D., Grigoriev I.V., Hibbett D.S. The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science 2012, 336:1715-1719.
-
(2012)
Science
, vol.336
, pp. 1715-1719
-
-
Floudas, D.1
Binder, M.2
Riley, R.3
Barry, K.4
Blanchette, R.A.5
Henrissat, B.6
Martínez, A.T.7
Otillar, R.8
Spatafora, J.W.9
Yadav, J.S.10
Aerts, A.11
Benoit, I.12
Boyd, A.13
Carlson, A.14
Copeland, A.15
Coutinho, P.M.16
de Vries, R.P.17
Ferreira, P.18
Findley, K.19
Foster, B.20
Gaskell, J.21
Glotzer, D.22
Górecki, P.23
Heitman, J.24
Hesse, C.25
Hori, C.26
Igarashi, K.27
Jurgens, J.A.28
Kallen, N.29
Kersten, P.30
Kohler, A.31
Kües, U.32
Kumar, T.K.A.33
Kuo, A.34
LaButti, K.35
Larrondo, L.F.36
Lindquist, E.37
Ling, A.38
Lombard, V.39
Lucas, S.40
Lundell, T.41
Martin, R.42
McLaughlin, D.J.43
Morgenstern, I.44
Morin, E.45
Murat, C.46
Nolan, M.47
Ohm, R.A.48
Patyshakuliyeva, A.49
Rokas, A.50
Ruiz-Dueñas, F.J.51
Sabat, G.52
Salamov, A.53
Samejima, M.54
Schmutz, J.55
Slot, J.C.56
St John, F.57
Stenlid, J.58
Sun, H.59
Sun, S.60
Syed, K.61
Tsang, A.62
Wiebenga, A.63
Young, D.64
Pisabarro, A.65
Eastwood, D.C.66
Martin, F.67
Cullen, D.68
Grigoriev, I.V.69
Hibbett, D.S.70
more..
-
13
-
-
0025120223
-
Lignin peroxidase from Phanerochaete chrysosporium - molecular and kinetic characterization of isozymes
-
Glumoff T., Harvey P.J., Molinari S., Goble M., Frank G., Palmer J.M., Smit J.D.G., Leisola M.S.A. Lignin peroxidase from Phanerochaete chrysosporium - molecular and kinetic characterization of isozymes. Eur. J. Biochem. 1990, 187:515-520.
-
(1990)
Eur. J. Biochem.
, vol.187
, pp. 515-520
-
-
Glumoff, T.1
Harvey, P.J.2
Molinari, S.3
Goble, M.4
Frank, G.5
Palmer, J.M.6
Smit, J.D.G.7
Leisola, M.S.A.8
-
14
-
-
0028268135
-
A reporter gene construct for studying the regulation of manganese peroxidase gene expression
-
Godfrey B.J., Akileswaran L., Gold M.H. A reporter gene construct for studying the regulation of manganese peroxidase gene expression. Appl. Environ. Microbiol. 1994, 60:1353-1358.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 1353-1358
-
-
Godfrey, B.J.1
Akileswaran, L.2
Gold, M.H.3
-
15
-
-
0027247475
-
Ligninolysis by a purified lignin peroxidase
-
Hammel K.E., Jensen K.A., Mozuch M.D., Landucci L.L., Tien M., Pease E.A. Ligninolysis by a purified lignin peroxidase. J. Biol. Chem. 1993, 268:12274-12281.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 12274-12281
-
-
Hammel, K.E.1
Jensen, K.A.2
Mozuch, M.D.3
Landucci, L.L.4
Tien, M.5
Pease, E.A.6
-
16
-
-
0029957181
-
Real time quantitative PCR
-
Heid C.A., Stevens J., Livak K.J., Williams P.M. Real time quantitative PCR. Genome Res. 1996, 6:986-994.
-
(1996)
Genome Res.
, vol.6
, pp. 986-994
-
-
Heid, C.A.1
Stevens, J.2
Livak, K.J.3
Williams, P.M.4
-
17
-
-
0142135413
-
Isolation of cDNA and genomic fragments encoding the major manganese peroxidase isoenzyme from the white rot basidiomycete Pleurotus ostreatus
-
Irie T., Honda Y., Ha H.-C., Watanabe T., Kuwahara M. Isolation of cDNA and genomic fragments encoding the major manganese peroxidase isoenzyme from the white rot basidiomycete Pleurotus ostreatus. J. Wood Sci. 2000, 46:230-233.
-
(2000)
J. Wood Sci.
, vol.46
, pp. 230-233
-
-
Irie, T.1
Honda, Y.2
Ha, H.-C.3
Watanabe, T.4
Kuwahara, M.5
-
18
-
-
84870348809
-
Fungal laccase, manganese peroxidase and lignin peroxidase: gene expression and regulation
-
Janusz G., Kucharzyk K.H., Pawlik A., Staszczak M., Paszczynski A.J. Fungal laccase, manganese peroxidase and lignin peroxidase: gene expression and regulation. Enzyme Microb. Technol. 2013, 52:1-12.
-
(2013)
Enzyme Microb. Technol.
, vol.52
, pp. 1-12
-
-
Janusz, G.1
Kucharzyk, K.H.2
Pawlik, A.3
Staszczak, M.4
Paszczynski, A.J.5
-
19
-
-
4544239823
-
Production and induction of manganese peroxidase isozymes in a white-rot fungus Pleurotus ostreatus
-
Kamitsuji H., Honda Y., Watanabe T., Kuwahara M. Production and induction of manganese peroxidase isozymes in a white-rot fungus Pleurotus ostreatus. Appl. Microbiol. Biotechnol. 2004, 65:287-294.
-
(2004)
Appl. Microbiol. Biotechnol.
, vol.65
, pp. 287-294
-
-
Kamitsuji, H.1
Honda, Y.2
Watanabe, T.3
Kuwahara, M.4
-
20
-
-
0344603831
-
Molecular karyotype of the white rot fungus Pleurotus ostreatus
-
Larraya L.M., Pérez G., Peñas M.M., Baars J.J.P., Mikosch T.S.P., Pisabarro A.G., Ramírez L. Molecular karyotype of the white rot fungus Pleurotus ostreatus. Appl. Environ. Microbiol. 1999, 65:3413-3417.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 3413-3417
-
-
Larraya, L.M.1
Pérez, G.2
Peñas, M.M.3
Baars, J.J.P.4
Mikosch, T.S.P.5
Pisabarro, A.G.6
Ramírez, L.7
-
21
-
-
79952646811
-
Robust RT-qPCR data normalization: validation and selection of internal reference genes during post-experimental data analysis
-
Ling D.J., Salvaterra P.M. Robust RT-qPCR data normalization: validation and selection of internal reference genes during post-experimental data analysis. PLoS ONE 2011, 6:3.
-
(2011)
PLoS ONE
, vol.6
, pp. 3
-
-
Ling, D.J.1
Salvaterra, P.M.2
-
22
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(-Delta Delta C) method
-
Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(-Delta Delta C) method. Methods 2001, 25:402-408.
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
23
-
-
79958235330
-
Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood
-
MacDonald J., Doering M., Canam T., Gong Y.C., Guttman D.S., Campbell M.M., Master E.R. Transcriptomic responses of the softwood-degrading white-rot fungus Phanerochaete carnosa during growth on coniferous and deciduous wood. Appl. Environ. Microbiol. 2011, 77:3211-3218.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 3211-3218
-
-
MacDonald, J.1
Doering, M.2
Canam, T.3
Gong, Y.C.4
Guttman, D.S.5
Campbell, M.M.6
Master, E.R.7
-
24
-
-
0028204295
-
Progress in biopulping of non-woody materials: Chemical, enzymatic and ultrastructural aspects of wheat-straw delignification with ligninolytic fungi from the genus Pleurotus
-
Martínez A.T., Camarero S., Guillén F., Gutiérrez A., Muñoz C., Varela E., Martínez M.J., Barrasa J.M., Ruel K., Pelayo M. Progress in biopulping of non-woody materials: Chemical, enzymatic and ultrastructural aspects of wheat-straw delignification with ligninolytic fungi from the genus Pleurotus. FEMS Microbiol. Rev. 1994, 13:265-274.
-
(1994)
FEMS Microbiol. Rev.
, vol.13
, pp. 265-274
-
-
Martínez, A.T.1
Camarero, S.2
Guillén, F.3
Gutiérrez, A.4
Muñoz, C.5
Varela, E.6
Martínez, M.J.7
Barrasa, J.M.8
Ruel, K.9
Pelayo, M.10
-
25
-
-
0030308896
-
-
Jeffries, T.W., Viikari, L. (Eds.), Enzymes for Pulp and Paper Processing ACS, Washington
-
Martínez, M.J., Böckle, B., Camarero, S., Guillén, F., Martínez, A.T., 1996. MnP isoenzymes produced by two Pleurotus species in liquid culture and during wheat straw solid-state fermentation. In: Jeffries, T.W., Viikari, L. (Eds.), Enzymes for Pulp and Paper Processing ACS, Washington, pp. 183-196.
-
(1996)
MnP isoenzymes produced by two Pleurotus species in liquid culture and during wheat straw solid-state fermentation
, pp. 183-196
-
-
Martínez, M.J.1
Böckle, B.2
Camarero, S.3
Guillén, F.4
Martínez, A.T.5
-
26
-
-
2542601548
-
Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78
-
Martinez D., Larrondo L.F., Putnam N., Gelpke M.D., Huang K., Chapman J., Helfenbein K.G., Ramaiya P., Detter J.C., Larimer F., Coutinho P.M., Henrissat B., Berka R., Cullen D., Rokhsar D. Genome sequence of the lignocellulose degrading fungus Phanerochaete chrysosporium strain RP78. Nat. Biotechnol. 2004, 22:695-700.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 695-700
-
-
Martinez, D.1
Larrondo, L.F.2
Putnam, N.3
Gelpke, M.D.4
Huang, K.5
Chapman, J.6
Helfenbein, K.G.7
Ramaiya, P.8
Detter, J.C.9
Larimer, F.10
Coutinho, P.M.11
Henrissat, B.12
Berka, R.13
Cullen, D.14
Rokhsar, D.15
-
27
-
-
67649770563
-
Enzymatic delignification of plant cell wall: from nature to mill
-
Martínez A.T., Ruiz-Dueñas F.J., Martínez M.J., del Río J.C., Gutiérrez A. Enzymatic delignification of plant cell wall: from nature to mill. Curr. Opin. Biotechnol. 2009, 20:348-357.
-
(2009)
Curr. Opin. Biotechnol.
, vol.20
, pp. 348-357
-
-
Martínez, A.T.1
Ruiz-Dueñas, F.J.2
Martínez, M.J.3
del Río, J.C.4
Gutiérrez, A.5
-
28
-
-
60549116487
-
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion
-
Martinez D., Challacombe J., Morgenstern I., Hibbett D.S., Schmoll M., Kubicek C.P., Ferreira P., Ruiz-Dueñas F.J., Martínez A.T., Kersten P., Hammel K.E., Vanden Wymelenberg A., Gaskell J., Lindquist E., Sabat G., Bondurant S.S., Larrondo L.F., Canessa P., Vicuña R., Yadav J., Doddapaneni H., Subramanian V., Pisabarro A.G., Lavín J.L., Oguiza J.A., Master E., Henrissat B., Coutinho P.M., Harris P., Magnuson J.K., Baker S.E., Bruno K., Kenealy W., Hoegger P.J., Kues U., Ramaiya P., Lucas S., Salamov A., Shapiro H., Tu H., Chee C.L., Misra M., Xie G., Teter S., Yaver D., James T., Mokrejs M., Pospisek M., Grigoriev I.V., Brettin T., Rokhsar D., Berka R., Cullen D. Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion. Proc. Natl. Acad. Sci. USA 2009, 106:1954-1959.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 1954-1959
-
-
Martinez, D.1
Challacombe, J.2
Morgenstern, I.3
Hibbett, D.S.4
Schmoll, M.5
Kubicek, C.P.6
Ferreira, P.7
Ruiz-Dueñas, F.J.8
Martínez, A.T.9
Kersten, P.10
Hammel, K.E.11
Vanden Wymelenberg, A.12
Gaskell, J.13
Lindquist, E.14
Sabat, G.15
Bondurant, S.S.16
Larrondo, L.F.17
Canessa, P.18
Vicuña, R.19
Yadav, J.20
Doddapaneni, H.21
Subramanian, V.22
Pisabarro, A.G.23
Lavín, J.L.24
Oguiza, J.A.25
Master, E.26
Henrissat, B.27
Coutinho, P.M.28
Harris, P.29
Magnuson, J.K.30
Baker, S.E.31
Bruno, K.32
Kenealy, W.33
Hoegger, P.J.34
Kues, U.35
Ramaiya, P.36
Lucas, S.37
Salamov, A.38
Shapiro, H.39
Tu, H.40
Chee, C.L.41
Misra, M.42
Xie, G.43
Teter, S.44
Yaver, D.45
James, T.46
Mokrejs, M.47
Pospisek, M.48
Grigoriev, I.V.49
Brettin, T.50
Rokhsar, D.51
Berka, R.52
Cullen, D.53
more..
-
29
-
-
0028275207
-
Characterization of the mnp2 gene encoding manganese peroxidase isozyme 2 from the basidiomycete Phanerochaete chrysosporium
-
Mayfield M.B., Godfrey B.J., Gold M.H. Characterization of the mnp2 gene encoding manganese peroxidase isozyme 2 from the basidiomycete Phanerochaete chrysosporium. Gene 1994, 142:231-235.
-
(1994)
Gene
, vol.142
, pp. 231-235
-
-
Mayfield, M.B.1
Godfrey, B.J.2
Gold, M.H.3
-
30
-
-
0034052120
-
Copper induction of laccase isoenzymes in the ligninolytic fungus Pleurotus ostreatus
-
Palmieri G., Giardina P., Bianco C., Fontanella B., Sannia G. Copper induction of laccase isoenzymes in the ligninolytic fungus Pleurotus ostreatus. Appl. Environ. Microbiol. 2000, 66:920-924.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 920-924
-
-
Palmieri, G.1
Giardina, P.2
Bianco, C.3
Fontanella, B.4
Sannia, G.5
-
31
-
-
0037117794
-
Expression of Pleurotus eryngii versatile peroxidase in Escherichia coli and optimisation of in vitro folding
-
Pérez-Boada M., Doyle W.A., Ruiz-Dueñas F.J., Martínez M.J., Martínez A.T., Smith A.T. Expression of Pleurotus eryngii versatile peroxidase in Escherichia coli and optimisation of in vitro folding. Enzyme Microb. Technol. 2002, 30:518-524.
-
(2002)
Enzyme Microb. Technol.
, vol.30
, pp. 518-524
-
-
Pérez-Boada, M.1
Doyle, W.A.2
Ruiz-Dueñas, F.J.3
Martínez, M.J.4
Martínez, A.T.5
Smith, A.T.6
-
32
-
-
0035108279
-
Validities of mRNA quantification using recombinant RNA and recombinant DNA external calibration curves in real-time RT-PCR
-
Pfaffl M.W., Hageleit M. Validities of mRNA quantification using recombinant RNA and recombinant DNA external calibration curves in real-time RT-PCR. Biotechnol. Lett. 2001, 23:275-282.
-
(2001)
Biotechnol. Lett.
, vol.23
, pp. 275-282
-
-
Pfaffl, M.W.1
Hageleit, M.2
-
33
-
-
17344392308
-
A new mathematical model for relative quantification in real-time RT-PCR
-
Pfaffl M.W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 2001, 29:9.
-
(2001)
Nucleic Acids Res.
, vol.29
, pp. 9
-
-
Pfaffl, M.W.1
-
34
-
-
25444494901
-
Quantification strategies in real-time PCR
-
La Jolla, CA, S.A. Bustin (Ed.)
-
Pfaffl M.W. Quantification strategies in real-time PCR. A-Z of Quantitative PCR International University Line 2004, 87-120. La Jolla, CA. S.A. Bustin (Ed.).
-
(2004)
A-Z of Quantitative PCR International University Line
, pp. 87-120
-
-
Pfaffl, M.W.1
-
35
-
-
84908532779
-
-
Mushrooms. McMilan.
-
Phillips, R., 2006. Mushrooms. McMilan.
-
(2006)
-
-
Phillips, R.1
-
36
-
-
32144437945
-
-
Evaluation of methods for oligonucleotide array data via quantitative real-time PCR. BMC Bioinformatics 7.
-
Qin, L.X., Beyer, R.P., Hudson, F.N., Linford, N.J., Morris, D.E., Kerr, K.F., 2006. Evaluation of methods for oligonucleotide array data via quantitative real-time PCR. BMC Bioinformatics 7.
-
(2006)
-
-
Qin, L.X.1
Beyer, R.P.2
Hudson, F.N.3
Linford, N.J.4
Morris, D.E.5
Kerr, K.F.6
-
37
-
-
0037435395
-
Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data
-
Ramakers C., Ruijter J.M., Deprez R.H.L., Moorman A.F.M. Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci. Lett. 2003, 339:62-66.
-
(2003)
Neurosci. Lett.
, vol.339
, pp. 62-66
-
-
Ramakers, C.1
Ruijter, J.M.2
Deprez, R.H.L.3
Moorman, A.F.M.4
-
38
-
-
67649799362
-
Microbial degradation of lignin: how a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this
-
Ruiz-Dueñas F.J., Martínez A.T. Microbial degradation of lignin: how a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this. Microbial Biotechnol. 2009, 2:164-177.
-
(2009)
Microbial Biotechnol.
, vol.2
, pp. 164-177
-
-
Ruiz-Dueñas, F.J.1
Martínez, A.T.2
-
39
-
-
84895209619
-
-
Torres, E., Ayala, M. (Eds.), Biocatalysts based on Heme Peroxidases, Springer-Verlag, Berlin
-
Ruiz-Dueñas, F.J., Martínez, A.T., 2010. Structural and functional features of peroxidases with a potential as industrial biocatalysts. In: Torres, E., Ayala, M. (Eds.), Biocatalysts based on Heme Peroxidases, Springer-Verlag, Berlin, pp. 37-59.
-
(2010)
Structural and functional features of peroxidases with a potential as industrial biocatalysts
, pp. 37-59
-
-
Ruiz-Dueñas, F.J.1
Martínez, A.T.2
-
40
-
-
0032834008
-
Regulation of peroxidase transcript levels in liquid cultures of the ligninolytic fungus Pleurotus eryngii
-
Ruiz-Dueñas F.J., Guillén F., Camarero S., Pérez-Boada M., Martínez M.J., Martínez A.T. Regulation of peroxidase transcript levels in liquid cultures of the ligninolytic fungus Pleurotus eryngii. Appl. Environ. Microbiol. 1999, 65:4458-4463.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 4458-4463
-
-
Ruiz-Dueñas, F.J.1
Guillén, F.2
Camarero, S.3
Pérez-Boada, M.4
Martínez, M.J.5
Martínez, A.T.6
-
41
-
-
80955142808
-
Pleurotus ostreatus heme peroxidases: an in silico analysis from the genome sequence to the enzyme molecular structure
-
Ruiz-Dueñas F.J., Fernández E., Martínez M.J., Martínez A.T. Pleurotus ostreatus heme peroxidases: an in silico analysis from the genome sequence to the enzyme molecular structure. C. R. Biol. 2011, 334:795-805.
-
(2011)
C. R. Biol.
, vol.334
, pp. 795-805
-
-
Ruiz-Dueñas, F.J.1
Fernández, E.2
Martínez, M.J.3
Martínez, A.T.4
-
42
-
-
84892423755
-
Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on ten sequenced genomes
-
Ruiz-Dueñas F.J., Lundell T., Floudas D., Nagy L.G., Barrasa J.M., Hibbett D.S., Martínez A.T. Lignin-degrading peroxidases in Polyporales: an evolutionary survey based on ten sequenced genomes. Mycologia 2013, 105:1428-1444.
-
(2013)
Mycologia
, vol.105
, pp. 1428-1444
-
-
Ruiz-Dueñas, F.J.1
Lundell, T.2
Floudas, D.3
Nagy, L.G.4
Barrasa, J.M.5
Hibbett, D.S.6
Martínez, A.T.7
-
43
-
-
77953580652
-
Pleurotus ostreatus manganese-dependent peroxidase silencing impairs decolourization of Orange II
-
Salame T.M., Yarden O., Hadar Y. Pleurotus ostreatus manganese-dependent peroxidase silencing impairs decolourization of Orange II. Microbial Biotechnol. 2010, 3:93-106.
-
(2010)
Microbial Biotechnol.
, vol.3
, pp. 93-106
-
-
Salame, T.M.1
Yarden, O.2
Hadar, Y.3
-
44
-
-
84871399712
-
Release of Pleurotus ostreatus versatile-peroxidase from Mn2+ repression enhances anthropogenic and natural substrate degradation
-
Salame T.M., Knop D., Levinson D., Mabjeesh S.J., Yarden O., Hadar Y. Release of Pleurotus ostreatus versatile-peroxidase from Mn2+ repression enhances anthropogenic and natural substrate degradation. PLoS ONE 2012, 7:12.
-
(2012)
PLoS ONE
, vol.7
, pp. 12
-
-
Salame, T.M.1
Knop, D.2
Levinson, D.3
Mabjeesh, S.J.4
Yarden, O.5
Hadar, Y.6
-
45
-
-
84875482808
-
Redundancy among manganese peroxidases in Pleurotus ostreatus
-
Salame T.M., Knop D., Levinson D., Yarden O., Hadar Y. Redundancy among manganese peroxidases in Pleurotus ostreatus. Appl. Environ. Microbiol. 2013, 79:2405-2415.
-
(2013)
Appl. Environ. Microbiol.
, vol.79
, pp. 2405-2415
-
-
Salame, T.M.1
Knop, D.2
Levinson, D.3
Yarden, O.4
Hadar, Y.5
-
46
-
-
79959624530
-
Fungal pretreatment: an alternative in second-generation ethanol from wheat straw
-
Salvachúa D., Prieto A., Lopez-Abelairas M., Lú-Chau T., Martínez A.T., Martínez M.J. Fungal pretreatment: an alternative in second-generation ethanol from wheat straw. Bioresource Technol. 2011, 102:7500-7506.
-
(2011)
Bioresource Technol.
, vol.102
, pp. 7500-7506
-
-
Salvachúa, D.1
Prieto, A.2
Lopez-Abelairas, M.3
Lú-Chau, T.4
Martínez, A.T.5
Martínez, M.J.6
-
47
-
-
76649111369
-
Cultivation of Pleurotus ostreatus and other edible mushrooms
-
Sánchez C. Cultivation of Pleurotus ostreatus and other edible mushrooms. Appl. Microbiol. Biotechnol. 2010, 85:1321-1337.
-
(2010)
Appl. Microbiol. Biotechnol.
, vol.85
, pp. 1321-1337
-
-
Sánchez, C.1
-
48
-
-
0030939022
-
Biochemical and molecular characterization of a manganese peroxidase isoenzyme from Pleurotus ostreatus
-
Sarkar S., Martínez A.T., Martínez M.J. Biochemical and molecular characterization of a manganese peroxidase isoenzyme from Pleurotus ostreatus. Biochim. Biophys. Acta 1997, 1339:23-30.
-
(1997)
Biochim. Biophys. Acta
, vol.1339
, pp. 23-30
-
-
Sarkar, S.1
Martínez, A.T.2
Martínez, M.J.3
-
49
-
-
67349249841
-
The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak
-
Sato S., Feltus F.A., Iyer P., Tien M. The first genome-level transcriptome of the wood-degrading fungus Phanerochaete chrysosporium grown on red oak. Curr. Genetics 2009, 55:273-286.
-
(2009)
Curr. Genetics
, vol.55
, pp. 273-286
-
-
Sato, S.1
Feltus, F.A.2
Iyer, P.3
Tien, M.4
-
50
-
-
0027882579
-
Detection and direct-sequence identification of BCR-ABL messenger-RNA in Ph(+) chronic myeloid-leukemia
-
Sooknanan R., Malek L., Wang X.H., Siebert T., Keating A. Detection and direct-sequence identification of BCR-ABL messenger-RNA in Ph(+) chronic myeloid-leukemia. Exp. Hematol. 1993, 21:1719-1724.
-
(1993)
Exp. Hematol.
, vol.21
, pp. 1719-1724
-
-
Sooknanan, R.1
Malek, L.2
Wang, X.H.3
Siebert, T.4
Keating, A.5
-
51
-
-
42549086336
-
Multiway real-time PCR gene expression profiling in yeast Saccharomyces cerevisiae reveals altered transcriptional response of ADH-genes to glucose stimuli
-
Stahlberg A., Elbing K., Andrade-Garda J.M., Sjogreen B., Forootan A., Kubista M. Multiway real-time PCR gene expression profiling in yeast Saccharomyces cerevisiae reveals altered transcriptional response of ADH-genes to glucose stimuli. BMC Genomics 2008, 9:170.
-
(2008)
BMC Genomics
, vol.9
, pp. 170
-
-
Stahlberg, A.1
Elbing, K.2
Andrade-Garda, J.M.3
Sjogreen, B.4
Forootan, A.5
Kubista, M.6
-
52
-
-
37049181820
-
Lignin-degrading enzyme from the hymenomycete Phanerochaete chrysosporium Burds
-
Tien M., Kirk T.K. Lignin-degrading enzyme from the hymenomycete Phanerochaete chrysosporium Burds. Science 1983, 221:661-663.
-
(1983)
Science
, vol.221
, pp. 661-663
-
-
Tien, M.1
Kirk, T.K.2
-
53
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
-
Vandesompele J., De Preter K., Pattyn F., Poppe B., Van Roy N., De Paepe A., Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 2002, 3:7.
-
(2002)
Genome Biol.
, vol.3
, pp. 7
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
54
-
-
79960107735
-
Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species
-
Wymelenberg A.V., Gaskell J., Mozuch M., Bondurant S.S., Sabat G., Ralph J., Skyba O., Mansfield S.D., Blanchette R.A., Grigoriev I.V., Kersten P.J., Cullen D. Significant alteration of gene expression in wood decay fungi Postia placenta and Phanerochaete chrysosporium by plant species. Appl. Environ. Microbiol. 2011, 77:4499-4507.
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 4499-4507
-
-
Wymelenberg, A.V.1
Gaskell, J.2
Mozuch, M.3
Bondurant, S.S.4
Sabat, G.5
Ralph, J.6
Skyba, O.7
Mansfield, S.D.8
Blanchette, R.A.9
Grigoriev, I.V.10
Kersten, P.J.11
Cullen, D.12
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