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Volumn 4, Issue 11, 2014, Pages 1342-1353

Genomic landscape of ewing sarcoma defines an aggressive subtype with co-association of STAG2 and TP53 mutations

(35)  Tirode, Franck a,b   Surdez, Didier a,b   Ma, Xiaotu c   Parker, Matthew c   Le Deley, Marie Cécile d   Bahrami, Armita c   Zhang, Zhaojie c   Lapouble, Eve e   Grossetete Lalami, Sandrine a,b   Rusch, Michael c   Reynaud, Stephanie e   Rio Frio, Thomas b   Hedlund, Erin c   Wu, Gang c   Chen, Xiang c   Pierron, Gaelle e   Oberlin, Odile d   Zaidi, Sakina a,b   Lemmon, Gordon c   Gupta, Pankaj c   more..


Author keywords

[No Author keywords available]

Indexed keywords

CYCLIN DEPENDENT KINASE INHIBITOR 2A; TRANSCRIPTION FACTOR EZH2; CELL NUCLEUS ANTIGEN; DNA; PROTEIN P53; STAG2 PROTEIN, HUMAN; TP53 PROTEIN, HUMAN;

EID: 84908397914     PISSN: 21598274     EISSN: 21598290     Source Type: Journal    
DOI: 10.1158/2159-8290.CD-14-0622     Document Type: Article
Times cited : (383)

References (50)
  • 1
    • 84856870979 scopus 로고    scopus 로고
    • Molecular pathogenesis of Ewing sarcoma: New therapeutic and transcriptional targets
    • Lessnick SL, Ladanyi M. Molecular pathogenesis of Ewing sarcoma: new therapeutic and transcriptional targets. Annu Rev Pathol 2012; 7: 145-59.
    • (2012) Annu Rev Pathol , vol.7 , pp. 145-159
    • Lessnick, S.L.1    Ladanyi, M.2
  • 2
    • 0026686674 scopus 로고
    • Gene fusion with an ETS DNA-binding domain caused by chromosome translocation in human tumours
    • Delattre O, Zucman J, Plougastel B, Desmaze C, Melot T, Peter M, et al. Gene fusion with an ETS DNA-binding domain caused by chromosome translocation in human tumours. Nature 1992; 359: 162-5.
    • (1992) Nature , vol.359 , pp. 162-165
    • Delattre, O.1    Zucman, J.2    Plougastel, B.3    Desmaze, C.4    Melot, T.5    Peter, M.6
  • 3
    • 0027362619 scopus 로고
    • The Ewing’s sarcoma EWS/FLI-1 fusion gene encodes a more potent transcriptional activator and is a more powerful transforming gene than FLI-1
    • May WA, Lessnick SL, Braun BS, Klemsz M, Lewis BC, Lunsford LB, et al. The Ewing’s sarcoma EWS/FLI-1 fusion gene encodes a more potent transcriptional activator and is a more powerful transforming gene than FLI-1. Mol Cell Biol 1993; 13: 7393-8.
    • (1993) Mol Cell Biol , vol.13 , pp. 7393-7398
    • May, W.A.1    Lessnick, S.L.2    Braun, B.S.3    Klemsz, M.4    Lewis, B.C.5    Lunsford, L.B.6
  • 4
    • 8244263615 scopus 로고    scopus 로고
    • Recurrent gains of 1q, 8 and 12 in the Ewing family of tumours by comparative genomic hybridization
    • Armengol G, Tarkkanen M, Virolainen M, Forus A, Valle J, Bohling T, et al. Recurrent gains of 1q, 8 and 12 in the Ewing family of tumours by comparative genomic hybridization. Br J Cancer 1997; 75: 1403-9.
    • (1997) Br J Cancer , vol.75 , pp. 1403-1409
    • Armengol, G.1    Tarkkanen, M.2    Virolainen, M.3    Forus, A.4    Valle, J.5    Bohling, T.6
  • 5
    • 0035475586 scopus 로고    scopus 로고
    • CGH analysis of secondary genetic changes in Ewing tumors: Correlation with metastatic disease in a series of 43 cases
    • Brisset S, Schleiermacher G, Peter M, Mairal A, Oberlin O, Delattre O, et al. CGH analysis of secondary genetic changes in Ewing tumors: correlation with metastatic disease in a series of 43 cases. Cancer Genet Cytogenet 2001; 130: 57-61.
    • (2001) Cancer Genet Cytogenet , vol.130 , pp. 57-61
    • Brisset, S.1    Schleiermacher, G.2    Peter, M.3    Mairal, A.4    Oberlin, O.5    Delattre, O.6
  • 6
    • 34250379011 scopus 로고    scopus 로고
    • Chromosome 9p21 gene copy number and prognostic significance of p16 in ESFT
    • Brownhill SC, Taylor C, Burchill SA. Chromosome 9p21 gene copy number and prognostic significance of p16 in ESFT. Br J Cancer 2007; 96: 1914-23.
    • (2007) Br J Cancer , vol.96 , pp. 1914-1923
    • Brownhill, S.C.1    Taylor, C.2    Burchill, S.A.3
  • 8
    • 0030783770 scopus 로고    scopus 로고
    • Among genes involved in the RB dependent cell cycle regulatory cascade, the p16 tumor suppressor gene is frequently lost in the Ewing family of tumors
    • Kovar H, Jug G, Aryee DN, Zoubek A, Ambros P, Gruber B, et al. Among genes involved in the RB dependent cell cycle regulatory cascade, the p16 tumor suppressor gene is frequently lost in the Ewing family of tumors. Oncogene 1997; 15: 2225-32.
    • (1997) Oncogene , vol.15 , pp. 2225-2232
    • Kovar, H.1    Jug, G.2    Aryee, D.N.3    Zoubek, A.4    Ambros, P.5    Gruber, B.6
  • 11
    • 20044367805 scopus 로고    scopus 로고
    • Ewing sarcomas with p53 mutation or p16/p14ARF homozygous deletion: A highly lethal subset associated with poor chemoresponse
    • Huang H-Y, Illei PB, Zhao Z, Mazumdar M, Huvos AG, Healey JH, et al. Ewing sarcomas with p53 mutation or p16/p14ARF homozygous deletion: a highly lethal subset associated with poor chemoresponse. J Clin Oncol 2005; 23: 548-58.
    • (2005) J Clin Oncol , vol.23 , pp. 548-558
    • Huang, H.-Y.1    Illei, P.B.2    Zhao, Z.3    Mazumdar, M.4    Huvos, A.G.5    Healey, J.H.6
  • 13
    • 79961007031 scopus 로고    scopus 로고
    • CREST maps somatic structural variation in cancer genomes with base-pair resolution
    • Wang J, Mullighan CG, Easton J, Roberts S, Heatley SL, Ma J, et al. CREST maps somatic structural variation in cancer genomes with base-pair resolution. Nat Methods 2011; 8: 652-4.
    • (2011) Nat Methods , vol.8 , pp. 652-654
    • Wang, J.1    Mullighan, C.G.2    Easton, J.3    Roberts, S.4    Heatley, S.L.5    Ma, J.6
  • 15
    • 84862907593 scopus 로고    scopus 로고
    • The genetic basis of early T-cell precursor acute lymphoblastic leukaemia
    • Zhang J, Ding L, Holmfeldt L, Wu G, Heatley SL, Payne-Turner D, et al. The genetic basis of early T-cell precursor acute lymphoblastic leukaemia. Nature 2012; 481: 157-63.
    • (2012) Nature , vol.481 , pp. 157-163
    • Zhang, J.1    Ding, L.2    Holmfeldt, L.3    Wu, G.4    Heatley, S.L.5    Payne-Turner, D.6
  • 16
    • 0027438827 scopus 로고
    • Combinatorial generation of variable fusion proteins in the Ewing family of tumours
    • Zucman J, Melot T, Desmaze C, Ghysdael J, Plougastel B, Peter M, et al. Combinatorial generation of variable fusion proteins in the Ewing family of tumours. EMBO J 1993; 12: 4481-7.
    • (1993) EMBO J , vol.12 , pp. 4481-4487
    • Zucman, J.1    Melot, T.2    Desmaze, C.3    Ghysdael, J.4    Plougastel, B.5    Peter, M.6
  • 20
    • 84907304074 scopus 로고    scopus 로고
    • The landscape of somatic mutations in epigenetic regulators across 1,000 paediatric cancer genomes
    • Huether R, Dong L, Chen X, Wu G, Parker M, Wei L, et al. The landscape of somatic mutations in epigenetic regulators across 1,000 paediatric cancer genomes. Nat Commun 2014; 5: 3630.
    • (2014) Nat Commun , vol.5 , pp. 3630
    • Huether, R.1    Dong, L.2    Chen, X.3    Wu, G.4    Parker, M.5    Wei, L.6
  • 24
    • 84871982155 scopus 로고    scopus 로고
    • Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma
    • Sausen M, Leary RJ, Jones S, Wu J, Reynolds CP, Liu X, et al. Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma. Nat Genet 2013; 45: 12-7.
    • (2013) Nat Genet , vol.45 , pp. 12-17
    • Sausen, M.1    Leary, R.J.2    Jones, S.3    Wu, J.4    Reynolds, C.P.5    Liu, X.6
  • 26
    • 84896691170 scopus 로고    scopus 로고
    • Comprehensive genomic analysis of rhabdomyosarcoma reveals a landscape of alterations affecting a common genetic axis in fusionpositive and fusion-negative tumors
    • Shern JF, Chen L, Chmielecki J, Wei JS, Patidar R, Rosenberg M, et al. Comprehensive genomic analysis of rhabdomyosarcoma reveals a landscape of alterations affecting a common genetic axis in fusionpositive and fusion-negative tumors. Cancer Discov 2014; 4: 216-31.
    • (2014) Cancer Discov , vol.4 , pp. 216-231
    • Shern, J.F.1    Chen, L.2    Chmielecki, J.3    Wei, J.S.4    Patidar, R.5    Rosenberg, M.6
  • 30
    • 84862777348 scopus 로고    scopus 로고
    • Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma
    • Schwartzentruber J, Korshunov A, Liu X-Y, Jones DTW, Pfaff E, J acob K, et al. Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma. Nature 2012; 482: 226-31.
    • (2012) Nature , vol.482 , pp. 226-231
    • Schwartzentruber, J.1    Korshunov, A.2    Liu, X.-Y.3    Jones, D.T.W.4    Pfaff, E.5    J Acob, K.6
  • 31
    • 84898027965 scopus 로고    scopus 로고
    • Recurrent somatic structural variations contribute to tumorigenesis in pediatric osteosarcoma
    • Chen X, Bahrami A, Pappo A, Easton J, Dalton J, Hedlund E, et al. Recurrent somatic structural variations contribute to tumorigenesis in pediatric osteosarcoma. Cell Rep 2014; 7: 104-12.
    • (2014) Cell Rep , vol.7 , pp. 104-112
    • Chen, X.1    Bahrami, A.2    Pappo, A.3    Easton, J.4    Dalton, J.5    Hedlund, E.6
  • 32
    • 0023785269 scopus 로고
    • Chromosomes in Ewing’s sarcoma. II. Nonrandom additional changes, trisomy 8 and der(16)t(1;16)
    • Mugneret F, Lizard S, Aurias A, Turc-Carel C. Chromosomes in Ewing’s sarcoma. II. Nonrandom additional changes, trisomy 8 and der(16)t(1;16). Cancer Genet Cytogenet 1988; 32: 239-45.
    • (1988) Cancer Genet Cytogenet , vol.32 , pp. 239-245
    • Mugneret, F.1    Lizard, S.2    Aurias, A.3    Turc-Carel, C.4
  • 34
    • 84888380730 scopus 로고    scopus 로고
    • W hole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation
    • Guo G, Sun X, Chen C, Wu S, Huang P, Li Z, et al. W hole-genome and whole-exome sequencing of bladder cancer identifies frequent alterations in genes involved in sister chromatid cohesion and segregation. Nat Genet 2013; 45: 1459-63.
    • (2013) Nat Genet , vol.45 , pp. 1459-1463
    • Guo, G.1    Sun, X.2    Chen, C.3    Wu, S.4    Huang, P.5    Li, Z.6
  • 35
    • 84885021313 scopus 로고    scopus 로고
    • Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms
    • Kon A, Shih L-Y, Minamino M, Sanada M, Shiraishi Y, Nagata Y, et al. Recurrent mutations in multiple components of the cohesin complex in myeloid neoplasms. Nat Genet 2013; 45: 1232-7.
    • (2013) Nat Genet , vol.45 , pp. 1232-1237
    • Kon, A.1    Shih, L.-Y.2    Minamino, M.3    Sanada, M.4    Shiraishi, Y.5    Nagata, Y.6
  • 36
    • 84897865695 scopus 로고    scopus 로고
    • Frequent inactivating mutations of STAG2 in bladder cancer are associated with low tumour grade and stage and inversely related to chromosomal copy number changes
    • Taylor CF, Platt FM, Hurst CD, Thygesen HH, Knowles MA. Frequent inactivating mutations of STAG2 in bladder cancer are associated with low tumour grade and stage and inversely related to chromosomal copy number changes. Hum Mol Genet 2014; 23: 1964-74.
    • (2014) Hum Mol Genet , vol.23 , pp. 1964-1974
    • Taylor, C.F.1    Platt, F.M.2    Hurst, C.D.3    Thygesen, H.H.4    Knowles, M.A.5
  • 37
    • 79958065572 scopus 로고    scopus 로고
    • Specific sites in the C terminus of CTCF interact with the SA2 subunit of the cohesin complex and are required for cohesin-dependent insulation activity
    • Xiao T, Wallace J, Felsenfeld G. Specific sites in the C terminus of CTCF interact with the SA2 subunit of the cohesin complex and are required for cohesin-dependent insulation activity. Mol Cell Biol 2011; 31: 2174-83.
    • (2011) Mol Cell Biol , vol.31 , pp. 2174-2183
    • Xiao, T.1    Wallace, J.2    Felsenfeld, G.3
  • 38
    • 65549159993 scopus 로고    scopus 로고
    • Epigenetic silencing of the p16(INK4a) tumor suppressor is associated with loss of CTCF binding and a chromatin boundary
    • Witcher M, Emerson BM. Epigenetic silencing of the p16(INK4a) tumor suppressor is associated with loss of CTCF binding and a chromatin boundary. Mol Cell 2009; 34: 271-84.
    • (2009) Mol Cell , vol.34 , pp. 271-284
    • Witcher, M.1    Emerson, B.M.2
  • 40
    • 0034661248 scopus 로고    scopus 로고
    • Analysis of the p16INK4, p14ARF, p15, TP53, and MDM2 genes and their prognostic implications in osteosarcoma and Ewing sarcoma
    • Tsuchiya T, Sekine K, Hinohara S, Namiki T, Nobori T, Kaneko Y. Analysis of the p16INK4, p14ARF, p15, TP53, and MDM2 genes and their prognostic implications in osteosarcoma and Ewing sarcoma. Cancer Genet Cytogenet 2000; 120: 91-8.
    • (2000) Cancer Genet Cytogenet , vol.120 , pp. 91-98
    • Tsuchiya, T.1    Sekine, K.2    Hinohara, S.3    Namiki, T.4    Nobori, T.5    Kaneko, Y.6
  • 41
    • 84867285852 scopus 로고    scopus 로고
    • DNA methylation and gene expression profiling of Ewing sarcoma primary tumors reveal genes that are potential targets of epigenetic inactivation
    • Patel N, Black J, Chen X, Marcondes AM, Grady WM, Lawlor ER, et al. DNA methylation and gene expression profiling of Ewing sarcoma primary tumors reveal genes that are potential targets of epigenetic inactivation. Sarcoma 2012; 2012: 498472.
    • (2012) Sarcoma , vol.2012 , pp. 498472
    • Patel, N.1    Black, J.2    Chen, X.3    Marcondes, A.M.4    Grady, W.M.5    Lawlor, E.R.6
  • 42
    • 84877815031 scopus 로고    scopus 로고
    • EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation
    • Beguelin W, Popovic R, Teater M, Jiang Y, Bunting KL, Rosen M, et al. EZH2 is required for germinal center formation and somatic EZH2 mutations promote lymphoid transformation. Cancer Cell 2013; 23: 677-92.
    • (2013) Cancer Cell , vol.23 , pp. 677-692
    • Beguelin, W.1    Popovic, R.2    Teater, M.3    Jiang, Y.4    Bunting, K.L.5    Rosen, M.6
  • 43
    • 84902665681 scopus 로고    scopus 로고
    • A transgenic mouse model demonstrating the oncogenic role of mutations in the polycomb-group gene EZH2 in lymphomagenesis
    • Berg T, Thoene S, Yap D, Wee T, Schoeler N, Rosten P, et al. A transgenic mouse model demonstrating the oncogenic role of mutations in the polycomb-group gene EZH2 in lymphomagenesis. Blood 2014; 123: 3914-24.
    • (2014) Blood , vol.123 , pp. 3914-3924
    • Berg, T.1    Thoene, S.2    Yap, D.3    Wee, T.4    Schoeler, N.5    Rosten, P.6
  • 46
    • 84905457348 scopus 로고    scopus 로고
    • The genomic landscape of the Ewing sarcoma family of tumors reveals recurrent STAG2 mutation
    • Brohl AS, Solomon DA, Chang W, Wang J, Song Y, Sindiri S, et al. The genomic landscape of the Ewing sarcoma family of tumors reveals recurrent STAG2 mutation. PLoS Genet 2014; 10: e1004475.
    • (2014) PLoS Genet , vol.10 , pp. 1004475
    • Brohl, A.S.1    Solomon, D.A.2    Chang, W.3    Wang, J.4    Song, Y.5    Sindiri, S.6
  • 48
    • 0034979512 scopus 로고    scopus 로고
    • A multiplex real-time pcr assay for the detection of gene fusions observed in solid tumors
    • Peter M, Gilbert E, Delattre O. A multiplex real-time pcr assay for the detection of gene fusions observed in solid tumors. Lab Invest 2001; 81: 905-12.
    • (2001) Lab Invest , vol.81 , pp. 905-912
    • Peter, M.1    Gilbert, E.2    Delattre, O.3
  • 49
    • 84875135862 scopus 로고    scopus 로고
    • Criteria for inference of chromothripsis in cancer genomes
    • Korbel JO, Campbell PJ. Criteria for inference of chromothripsis in cancer genomes. Cell 2013; 152: 1226-36.
    • (2013) Cell , vol.152 , pp. 1226-1236
    • Korbel, J.O.1    Campbell, P.J.2
  • 50
    • 80052663200 scopus 로고    scopus 로고
    • The CDKN2A/CDKN2B/CDK4/CCND1 pathway is pivotal in well-differentiated and dedifferentiated liposarcoma oncogenesis: An analysis of 104 tumors
    • Louis-Brennetot C, Coindre J-M, Ferreira C, Perot G, Terrier P, Aurias A. The CDKN2A/CDKN2B/CDK4/CCND1 pathway is pivotal in well-differentiated and dedifferentiated liposarcoma oncogenesis: an analysis of 104 tumors. Genes Chromosomes Cancer 2011; 50: 896-907.
    • (2011) Genes Chromosomes Cancer , vol.50 , pp. 896-907
    • Louis-Brennetot, C.1    Coindre, J.-M.2    Ferreira, C.3    Perot, G.4    Terrier, P.5    Aurias, A.6


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