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Volumn 364, Issue , 2015, Pages 326-343

A microbial model of economic trading and comparative advantage

Author keywords

Bacterial signaling; Cooperation; Ecology; Non linear dynamics; Synthetic biology

Indexed keywords

BIOLOGY; COMPARATIVE STUDY; ECONOMIC THEORY; GENETIC ALGORITHM; MICROBIAL ACTIVITY; NUMERICAL MODEL;

EID: 84908305635     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2014.09.030     Document Type: Article
Times cited : (11)

References (77)
  • 1
    • 0019480612 scopus 로고
    • The evolution of cooperation
    • Axelrod R., Hamilton W.D. The evolution of cooperation. Science 1981, 211:1390-1396.
    • (1981) Science , vol.211 , pp. 1390-1396
    • Axelrod, R.1    Hamilton, W.D.2
  • 4
    • 36849005857 scopus 로고    scopus 로고
    • Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium
    • Brenner K., Karig D.K., Weiss R., Arnold F.H. Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:17300-17304.
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 17300-17304
    • Brenner, K.1    Karig, D.K.2    Weiss, R.3    Arnold, F.H.4
  • 5
    • 39849091187 scopus 로고    scopus 로고
    • Population bottlenecks promote cooperation in bacterial biofilms
    • Brockhurst M.A. Population bottlenecks promote cooperation in bacterial biofilms. PLoS One 2007, 2:e634.
    • (2007) PLoS One , vol.2 , pp. e634
    • Brockhurst, M.A.1
  • 6
    • 34247356615 scopus 로고    scopus 로고
    • Cooperation peaks at intermediate disturbance
    • Brockhurst M.A., Buckling A., Gardner A. Cooperation peaks at intermediate disturbance. Curr. Biol. 2007, 17:761-765.
    • (2007) Curr. Biol. , vol.17 , pp. 761-765
    • Brockhurst, M.A.1    Buckling, A.2    Gardner, A.3
  • 7
    • 58149458887 scopus 로고    scopus 로고
    • Population dynamics constrain the cooperative evolution of cross-feeding
    • Bull J.J., Harcombe W.R. Population dynamics constrain the cooperative evolution of cross-feeding. PLoS One 2009, 4:e4115.
    • (2009) PLoS One , vol.4 , pp. e4115
    • Bull, J.J.1    Harcombe, W.R.2
  • 8
    • 84871620014 scopus 로고    scopus 로고
    • Cellular cooperation: insights from microbes
    • Celiker H., Gore J. Cellular cooperation: insights from microbes. Trends Cell Biol. 2013, 23:9-15.
    • (2013) Trends Cell Biol. , vol.23 , pp. 9-15
    • Celiker, H.1    Gore, J.2
  • 9
    • 0001327030 scopus 로고
    • Structured habitats and the evolution of anticompetitor toxins in bacteria
    • Chao L., Levin B.R. Structured habitats and the evolution of anticompetitor toxins in bacteria. Proc. Natl. Acad. Sci. U.S.A. 1981, 78:6324-6328.
    • (1981) Proc. Natl. Acad. Sci. U.S.A. , vol.78 , pp. 6324-6328
    • Chao, L.1    Levin, B.R.2
  • 10
    • 58149392486 scopus 로고    scopus 로고
    • Simpson's paradox in a synthetic microbial system
    • Chuang J.S., Rivoire O., Leibler S. Simpson's paradox in a synthetic microbial system. Science 2009, 323:272-275.
    • (2009) Science , vol.323 , pp. 272-275
    • Chuang, J.S.1    Rivoire, O.2    Leibler, S.3
  • 11
    • 77955629989 scopus 로고    scopus 로고
    • Cooperation and Hamilton's rule in a simple synthetic microbial system
    • Chuang J.S., Rivoire O., Leibler S. Cooperation and Hamilton's rule in a simple synthetic microbial system. Mol. Syst. Biol. 2010, 6:398.
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 398
    • Chuang, J.S.1    Rivoire, O.2    Leibler, S.3
  • 12
    • 84876415483 scopus 로고    scopus 로고
    • Competition sensing: the social side of bacterial stress responses
    • Cornforth D.M., Foster K.R. Competition sensing: the social side of bacterial stress responses. Nat. Rev. Microbiol. 2013, 11:285-293.
    • (2013) Nat. Rev. Microbiol. , vol.11 , pp. 285-293
    • Cornforth, D.M.1    Foster, K.R.2
  • 13
    • 54049085062 scopus 로고    scopus 로고
    • Stable public goods cooperation and dynamic social interactions in yeast
    • Craig Maclean R., Brandon C. Stable public goods cooperation and dynamic social interactions in yeast. J. Evol. Biol. 2008, 21:1836-1843.
    • (2008) J. Evol. Biol. , vol.21 , pp. 1836-1843
    • Craig Maclean, R.1    Brandon, C.2
  • 14
    • 0035313866 scopus 로고    scopus 로고
    • The evolution of social behavior in microorganisms
    • Crespi B.J. The evolution of social behavior in microorganisms. Trends Ecol. Evol. 2001, 16:178-183.
    • (2001) Trends Ecol. Evol. , vol.16 , pp. 178-183
    • Crespi, B.J.1
  • 17
    • 33745015742 scopus 로고    scopus 로고
    • Are antibiotics naturally antibiotics?
    • Davies J. Are antibiotics naturally antibiotics?. J. Ind. Microbiol. Biotechnol. 2006, 33:496-499.
    • (2006) J. Ind. Microbiol. Biotechnol. , vol.33 , pp. 496-499
    • Davies, J.1
  • 18
    • 33748698411 scopus 로고    scopus 로고
    • The world of subinhibitory antibiotic concentrations
    • Davies J., Spiegelman G.B., Yim G. The world of subinhibitory antibiotic concentrations. Curr. Opin. Microbiol. 2006, 9:445-453.
    • (2006) Curr. Opin. Microbiol. , vol.9 , pp. 445-453
    • Davies, J.1    Spiegelman, G.B.2    Yim, G.3
  • 19
    • 36248965729 scopus 로고    scopus 로고
    • Cooperation and conflict in quorum-sensing bacterial populations
    • Diggle S.P., Griffin A.S., Campbell G.S., West S.A. Cooperation and conflict in quorum-sensing bacterial populations. Nature 2007, 450:411-414.
    • (2007) Nature , vol.450 , pp. 411-414
    • Diggle, S.P.1    Griffin, A.S.2    Campbell, G.S.3    West, S.A.4
  • 20
    • 78650869914 scopus 로고    scopus 로고
    • An evolutionary perspective on self-organized division of labor in social insects
    • Duarte A., Weissing F.J., Pen I., Keller L. An evolutionary perspective on self-organized division of labor in social insects. Annu. Rev. Ecol. Evol. Syst. 2011, Vol 42(42):91-110.
    • (2011) Annu. Rev. Ecol. Evol. Syst. , vol.42 , Issue.42 , pp. 91-110
    • Duarte, A.1    Weissing, F.J.2    Pen, I.3    Keller, L.4
  • 21
    • 33846921231 scopus 로고    scopus 로고
    • Synthetic ecology: a model system for cooperation
    • Dunham M.J. Synthetic ecology: a model system for cooperation. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:1741-1742.
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 1741-1742
    • Dunham, M.J.1
  • 22
    • 0034688173 scopus 로고    scopus 로고
    • A synthetic oscillatory network of transcriptional regulators
    • Elowitz M.B., Leibler S. A synthetic oscillatory network of transcriptional regulators. Nature 2000, 403:335-338.
    • (2000) Nature , vol.403 , pp. 335-338
    • Elowitz, M.B.1    Leibler, S.2
  • 24
    • 42049120716 scopus 로고    scopus 로고
    • Antibiotics as signals that trigger specific bacterial responses
    • Fajardo A., Martinez J.L. Antibiotics as signals that trigger specific bacterial responses. Curr. Opin. Microbiol. 2008, 11:161-167.
    • (2008) Curr. Opin. Microbiol. , vol.11 , pp. 161-167
    • Fajardo, A.1    Martinez, J.L.2
  • 25
    • 33744488606 scopus 로고    scopus 로고
    • Evolution of an obligate social cheater to a superior cooperator
    • Fiegna F., Yu Y.T., Kadam S.V., Velicer G.J. Evolution of an obligate social cheater to a superior cooperator. Nature 2006, 441:310-314.
    • (2006) Nature , vol.441 , pp. 310-314
    • Fiegna, F.1    Yu, Y.T.2    Kadam, S.V.3    Velicer, G.J.4
  • 26
    • 58149215957 scopus 로고    scopus 로고
    • A simple and general explanation for the evolution of altruism
    • Fletcher J.A., Doebeli M. A simple and general explanation for the evolution of altruism. Proc. R. Soc. B. 2009, 276:13-19.
    • (2009) Proc. R. Soc. B. , vol.276 , pp. 13-19
    • Fletcher, J.A.1    Doebeli, M.2
  • 27
    • 84867405105 scopus 로고    scopus 로고
    • Competition, not cooperation, dominates interactions among culturable microbial species
    • Foster K.R., Bell T. Competition, not cooperation, dominates interactions among culturable microbial species. Curr. Biol. 2012, 22:1845-1850.
    • (2012) Curr. Biol. , vol.22 , pp. 1845-1850
    • Foster, K.R.1    Bell, T.2
  • 28
    • 79952623983 scopus 로고    scopus 로고
    • The genetical theory of kin selection
    • Gardner A., West S.A., Wild G. The genetical theory of kin selection. J. Evol. Biol. 2011, 24:1020-1043.
    • (2011) J. Evol. Biol. , vol.24 , pp. 1020-1043
    • Gardner, A.1    West, S.A.2    Wild, G.3
  • 29
    • 0034688174 scopus 로고    scopus 로고
    • Construction of a genetic toggle switch in Escherichia coli
    • Gardner T.S., Cantor C.R., Collins J.J. Construction of a genetic toggle switch in Escherichia coli. Nature 2000, 403:339-342.
    • (2000) Nature , vol.403 , pp. 339-342
    • Gardner, T.S.1    Cantor, C.R.2    Collins, J.J.3
  • 30
    • 77955477943 scopus 로고    scopus 로고
    • Rapid transition towards the division of labor via evolution of developmental plasticity
    • Gavrilets S. Rapid transition towards the division of labor via evolution of developmental plasticity. PLoS Comput. Biol. 2010, 6:e1000805.
    • (2010) PLoS Comput. Biol. , vol.6 , pp. e1000805
    • Gavrilets, S.1
  • 31
    • 66149108283 scopus 로고    scopus 로고
    • Snowdrift game dynamics and facultative cheating in yeast
    • Gore J., Youk H., van Oudenaarden A. Snowdrift game dynamics and facultative cheating in yeast. Nature 2009, 459:253-256.
    • (2009) Nature , vol.459 , pp. 253-256
    • Gore, J.1    Youk, H.2    van Oudenaarden, A.3
  • 32
    • 0442323226 scopus 로고    scopus 로고
    • The Prisoner's Dilemma and polymorphism in yeast SUC genes
    • Greig D., Travisano M. The Prisoner's Dilemma and polymorphism in yeast SUC genes. Proc. R. Soc. B. 2004, 271(Suppl 3):S25-S26.
    • (2004) Proc. R. Soc. B. , vol.271 , Issue.SUPPL 3 , pp. S25-S26
    • Greig, D.1    Travisano, M.2
  • 33
    • 4344605134 scopus 로고    scopus 로고
    • Cooperation and competition in pathogenic bacteria
    • Griffin A.S., West S.A., Buckling A. Cooperation and competition in pathogenic bacteria. Nature 2004, 430:1024-1027.
    • (2004) Nature , vol.430 , pp. 1024-1027
    • Griffin, A.S.1    West, S.A.2    Buckling, A.3
  • 34
    • 0001742381 scopus 로고
    • Evolution of altruistic behavior
    • (354-&)
    • Hamilton W.D. Evolution of altruistic behavior. Am. Nat. 1963, 97. (354-&).
    • (1963) Am. Nat. , vol.97
    • Hamilton, W.D.1
  • 35
    • 0013770258 scopus 로고
    • The genetical evolution of social behaviour. I&II
    • Hamilton W.D. The genetical evolution of social behaviour. I&II. J. Theor. Biol. 1964, 7:1-52.
    • (1964) J. Theor. Biol. , vol.7 , pp. 1-52
    • Hamilton, W.D.1
  • 36
    • 78349245948 scopus 로고    scopus 로고
    • Novel cooperation experimentally evolved between species
    • Harcombe W. Novel cooperation experimentally evolved between species. Evolution 2010, 64:2166-2172.
    • (2010) Evolution , vol.64 , pp. 2166-2172
    • Harcombe, W.1
  • 37
    • 77956280046 scopus 로고    scopus 로고
    • An environment-sensitive synthetic microbial ecosystem
    • Hu B., Du J., Zou R.Y., Yuan Y.J. An environment-sensitive synthetic microbial ecosystem. PLoS One 2010, 5:e10619.
    • (2010) PLoS One , vol.5 , pp. e10619
    • Hu, B.1    Du, J.2    Zou, R.Y.3    Yuan, Y.J.4
  • 39
    • 84859123293 scopus 로고    scopus 로고
    • A programmable Escherichia coli consortium via tunable symbiosis
    • Kerner A., Park J., Williams A., Lin X.N. A programmable Escherichia coli consortium via tunable symbiosis. PLoS One 2012, 7:e34032.
    • (2012) PLoS One , vol.7 , pp. e34032
    • Kerner, A.1    Park, J.2    Williams, A.3    Lin, X.N.4
  • 41
    • 62749122252 scopus 로고    scopus 로고
    • Limited dispersal, budding dispersal, and cooperation: an experimental study
    • Kummerli R., Gardner A., West S.A., Griffin A.S. Limited dispersal, budding dispersal, and cooperation: an experimental study. Evolution 2009, 63:939-949.
    • (2009) Evolution , vol.63 , pp. 939-949
    • Kummerli, R.1    Gardner, A.2    West, S.A.3    Griffin, A.S.4
  • 44
    • 84858988771 scopus 로고    scopus 로고
    • Quorum sensing and bacterial social interactions in biofilms
    • Li Y.H., Tian X. Quorum sensing and bacterial social interactions in biofilms. Sensors (Basel) 2012, 12:2519-2538.
    • (2012) Sensors (Basel) , vol.12 , pp. 2519-2538
    • Li, Y.H.1    Tian, X.2
  • 46
    • 79957700542 scopus 로고    scopus 로고
    • Versatile RNA-sensing transcriptional regulators for engineering genetic networks
    • Lucks J.B., Qi L., Mutalik V.K., Wang D., Arkin A.P. Versatile RNA-sensing transcriptional regulators for engineering genetic networks. Proc. Natl. Acad. Sci. U.S.A. 2011, 108:8617-8622.
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 8617-8622
    • Lucks, J.B.1    Qi, L.2    Mutalik, V.K.3    Wang, D.4    Arkin, A.P.5
  • 47
    • 84866102281 scopus 로고    scopus 로고
    • Biofilm-specific antibiotic resistance
    • Mah T.F. Biofilm-specific antibiotic resistance. Future Microbiol. 2012, 7:1061-1072.
    • (2012) Future Microbiol. , vol.7 , pp. 1061-1072
    • Mah, T.F.1
  • 48
    • 84884535420 scopus 로고    scopus 로고
    • Peptide-based communication system enables Escherichia coli to Bacillus megaterium interspecies signaling
    • Marchand N., Collins C.H. Peptide-based communication system enables Escherichia coli to Bacillus megaterium interspecies signaling. Biotechnol. Bioeng. 2013, 110:3003-3012.
    • (2013) Biotechnol. Bioeng. , vol.110 , pp. 3003-3012
    • Marchand, N.1    Collins, C.H.2
  • 51
    • 84887794439 scopus 로고    scopus 로고
    • Spatial self-organization favors heterotypic cooperation over cheating
    • Momeni B., Waite A.J., Shou W. Spatial self-organization favors heterotypic cooperation over cheating. Elife 2013, 2:e00960.
    • (2013) Elife , vol.2 , pp. e00960
    • Momeni, B.1    Waite, A.J.2    Shou, W.3
  • 54
    • 0001639179 scopus 로고
    • The growth of bacterial cultures
    • Monod J. The growth of bacterial cultures. Annu. Rev. Microbiol. 1949, 3:371-394.
    • (1949) Annu. Rev. Microbiol. , vol.3 , pp. 371-394
    • Monod, J.1
  • 56
    • 84867900166 scopus 로고    scopus 로고
    • Heterocyst differentiation: from single mutants to global approaches
    • Muro-Pastor A.M., Hess W.R. Heterocyst differentiation: from single mutants to global approaches. Trends Microbiol. 2012, 20:548-557.
    • (2012) Trends Microbiol. , vol.20 , pp. 548-557
    • Muro-Pastor, A.M.1    Hess, W.R.2
  • 57
    • 84873596341 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs
    • Na D., Yoo S.M., Chung H., Park H., Park J.H., Lee S.Y. Metabolic engineering of Escherichia coli using synthetic small regulatory RNAs. Nat. Biotechnol. 2013, 31:170-174.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 170-174
    • Na, D.1    Yoo, S.M.2    Chung, H.3    Park, H.4    Park, J.H.5    Lee, S.Y.6
  • 58
    • 79960639069 scopus 로고    scopus 로고
    • Evolution of restraint in a structured rock-paper-scissors community
    • Nahum J.R., Harding B.N., Kerr B. Evolution of restraint in a structured rock-paper-scissors community. Proc. Natl. Acad. Sci. U.S.A. 2011, 108(Suppl. 2):10831-10838.
    • (2011) Proc. Natl. Acad. Sci. U.S.A. , vol.108 , pp. 10831-10838
    • Nahum, J.R.1    Harding, B.N.2    Kerr, B.3
  • 59
    • 0026613691 scopus 로고
    • Evolutionary games and spatial chaos
    • Nowak M.A., May R.M. Evolutionary games and spatial chaos. Nature 1992, 359:826-829.
    • (1992) Nature , vol.359 , pp. 826-829
    • Nowak, M.A.1    May, R.M.2
  • 60
    • 0036202092 scopus 로고    scopus 로고
    • Levels of behavioral organization and the evolution of division of labor
    • Page R.E., Erber J. Levels of behavioral organization and the evolution of division of labor. Naturwissenschaften 2002, 89:91-106.
    • (2002) Naturwissenschaften , vol.89 , pp. 91-106
    • Page, R.E.1    Erber, J.2
  • 61
    • 79960235537 scopus 로고    scopus 로고
    • Resolving the iterated prisoner's dilemma: theory and reality
    • Raihani N.J., Bshary R. Resolving the iterated prisoner's dilemma: theory and reality. J. Evol. Biol. 2011, 24:1628-1639.
    • (2011) J. Evol. Biol. , vol.24 , pp. 1628-1639
    • Raihani, N.J.1    Bshary, R.2
  • 62
    • 0042410586 scopus 로고    scopus 로고
    • Evolution of cooperation and conflict in experimental bacterial populations
    • Rainey P.B., Rainey K. Evolution of cooperation and conflict in experimental bacterial populations. Nature 2003, 425:72-74.
    • (2003) Nature , vol.425 , pp. 72-74
    • Rainey, P.B.1    Rainey, K.2
  • 66
    • 84876907934 scopus 로고    scopus 로고
    • Feedback between population and evolutionary dynamics determines the fate of social microbial populations
    • Sanchez A., Gore J. Feedback between population and evolutionary dynamics determines the fate of social microbial populations. PLoS Biol. 2013, 11:e1001547.
    • (2013) PLoS Biol. , vol.11 , pp. e1001547
    • Sanchez, A.1    Gore, J.2
  • 67
    • 0031725610 scopus 로고    scopus 로고
    • Thinking about bacterial populations as multicellular organisms
    • Shapiro J.A. Thinking about bacterial populations as multicellular organisms. Annu. Rev. Microbiol. 1998, 52:81-104.
    • (1998) Annu. Rev. Microbiol. , vol.52 , pp. 81-104
    • Shapiro, J.A.1
  • 70
    • 33846936445 scopus 로고    scopus 로고
    • Synthetic cooperation in engineered yeast populations
    • Shou W., Ram S., Vilar J.M. Synthetic cooperation in engineered yeast populations. Proc. Natl. Acad. Sci. U.S.A. 2007, 104:1877-1882.
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 1877-1882
    • Shou, W.1    Ram, S.2    Vilar, J.M.3
  • 71
    • 51349166103 scopus 로고    scopus 로고
    • Signal discrimination by differential regulation of protein stability in quorum sensing
    • Smith C., Song H., You L. Signal discrimination by differential regulation of protein stability in quorum sensing. J. Mol. Biol. 2008, 382:1290-1297.
    • (2008) J. Mol. Biol. , vol.382 , pp. 1290-1297
    • Smith, C.1    Song, H.2    You, L.3
  • 72
    • 0000841452 scopus 로고
    • Group selection and kin selection
    • Smith J.M. Group selection and kin selection. Nature 1964, 201:1145-1147.
    • (1964) Nature , vol.201 , pp. 1145-1147
    • Smith, J.M.1
  • 73
    • 84870835870 scopus 로고    scopus 로고
    • Programming stress-induced altruistic death in engineered bacteria
    • Tanouchi Y., Pai A., Buchler N.E., You L. Programming stress-induced altruistic death in engineered bacteria. Mol. Syst. Biol. 2012, 8:626.
    • (2012) Mol. Syst. Biol. , vol.8 , pp. 626
    • Tanouchi, Y.1    Pai, A.2    Buchler, N.E.3    You, L.4
  • 75
    • 84869774396 scopus 로고    scopus 로고
    • Adaptation to a new environment allows cooperators to purge cheaters stochastically
    • Waite A.J., Shou W. Adaptation to a new environment allows cooperators to purge cheaters stochastically. Proc. Natl. Acad. Sci. U.S.A. 2012, 109:19079-19086.
    • (2012) Proc. Natl. Acad. Sci. U.S.A. , vol.109 , pp. 19079-19086
    • Waite, A.J.1    Shou, W.2
  • 76
    • 37149047397 scopus 로고    scopus 로고
    • Rethinking the theoretical foundation of sociobiology
    • Wilson D.S., Wilson E.O. Rethinking the theoretical foundation of sociobiology. Q. Rev. Biol. 2007, 82:327-348.
    • (2007) Q. Rev. Biol. , vol.82 , pp. 327-348
    • Wilson, D.S.1    Wilson, E.O.2
  • 77
    • 77956415336 scopus 로고    scopus 로고
    • Emergent cooperation in microbial metabolism
    • Wintermute E.H., Silver P.A. Emergent cooperation in microbial metabolism. Mol. Syst. Biol. 2010, 6:407.
    • (2010) Mol. Syst. Biol. , vol.6 , pp. 407
    • Wintermute, E.H.1    Silver, P.A.2


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