-
1
-
-
84872229094
-
Biocides: Resistance, cross-resistance mechanisms and assessment
-
Gnanadhas DP, Marathe SA, Chakravortty D. 2013. Biocides: resistance, cross-resistance mechanisms and assessment. Expert Opin. Investig. Drugs 22:191-206. http://dx.doi.org/10.1517/13543784.2013.748035.
-
(2013)
Expert Opin. Investig. Drugs
, vol.22
, pp. 191-206
-
-
Gnanadhas, D.P.1
Marathe, S.A.2
Chakravortty, D.3
-
2
-
-
0035822555
-
Triclosan: A widely used biocide and its link to antibiotics
-
Schweizer HP. 2001. Triclosan: a widely used biocide and its link to antibiotics. FEMS Microbiol. Lett. 202:1-7. http://dx.doi.org/10.1111/j.1574-6968.2001.tb10772.x.
-
(2001)
FEMS Microbiol. Lett.
, vol.202
, pp. 1-7
-
-
Schweizer, H.P.1
-
3
-
-
22144471145
-
Bacterial resistance to antibiotics: Active efflux and reduced uptake
-
Kumar A, Schweizer HP. 2005. Bacterial resistance to antibiotics: active efflux and reduced uptake. Adv. Drug Deliv. Rev. 57:1486-1513. http://dx.doi.org/10.1016/j.addr.2005.04.004.
-
(2005)
Adv. Drug Deliv. Rev.
, vol.57
, pp. 1486-1513
-
-
Kumar, A.1
Schweizer, H.P.2
-
4
-
-
0032529948
-
Overexpression of marA, soxS, or acrAB produces resistance to triclosan in laboratory and clinical strains of Escherichia coli
-
McMurry LM, Oethinger M, Levy SB. 1998. Overexpression of marA, soxS, or acrAB produces resistance to triclosan in laboratory and clinical strains of Escherichia coli. FEMS Microbiol. Lett. 166:305-309. http://dx.doi.org/10.1111/j.1574-6968.1998.tb13905.x.
-
(1998)
FEMS Microbiol. Lett.
, vol.166
, pp. 305-309
-
-
McMurry, L.M.1
Oethinger, M.2
Levy, S.B.3
-
5
-
-
0036723860
-
The MexJK efflux pump of Pseudomonas aeruginosa requires OprM for antibiotic efflux but not for efflux of triclosan
-
Chuanchuen R, Narasaki CT, Schweizer HP. 2002. The MexJK efflux pump of Pseudomonas aeruginosa requires OprM for antibiotic efflux but not for efflux of triclosan. J. Bacteriol. 184:5036-5044. http://dx.doi.org/10.1128/JB.184.18.5036-5044.2002.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 5036-5044
-
-
Chuanchuen, R.1
Narasaki, C.T.2
Schweizer, H.P.3
-
6
-
-
35648995411
-
Identification and characterization of TriABC-OpmH, a triclosan efflux pump of Pseudomonas aeruginosa requiring two membrane fusion proteins
-
Mima T, Joshi S, Gomez-Escalada M, Schweizer HP. 2007. Identification and characterization of TriABC-OpmH, a triclosan efflux pump of Pseudomonas aeruginosa requiring two membrane fusion proteins. J. Bacteriol. 189:7600-7609. http://dx.doi.org/10.1128/JB.00850-07.
-
(2007)
J. Bacteriol.
, vol.189
, pp. 7600-7609
-
-
Mima, T.1
Joshi, S.2
Gomez-Escalada, M.3
Schweizer, H.P.4
-
7
-
-
45749116550
-
Triclosan resistance in Salmonella enterica serovar Typhimurium
-
Webber MA, Randall LP, Cooles S, Woodward MJ, Piddock LJV. 2008. Triclosan resistance in Salmonella enterica serovar Typhimurium. J. Antimicrob. Chemother. 62:83-91. http://dx.doi.org/10.1093/jac/dkn137.
-
(2008)
J. Antimicrob. Chemother.
, vol.62
, pp. 83-91
-
-
Webber, M.A.1
Randall, L.P.2
Cooles, S.3
Woodward, M.J.4
Piddock, L.J.V.5
-
8
-
-
73549086738
-
Multidrug-resistant Acinetobacter baumannii: Mechanisms of virulence and resistance
-
Gordon NC, Wareham DW. 2010. Multidrug-resistant Acinetobacter baumannii: mechanisms of virulence and resistance. Int. J. Antimicrob. Agents 35:219-226. http://dx.doi.org/10.1016/j.ijantimicag.2009.10.024.
-
(2010)
Int. J. Antimicrob. Agents
, vol.35
, pp. 219-226
-
-
Gordon, N.C.1
Wareham, D.W.2
-
9
-
-
11844265907
-
Multidrug-resistant Acinetobacter baumannii
-
Abbo A, Navon-Venezia S, Hammer-Muntz O, Krichali T, Siegman-Igra Y, Carmeli Y. 2005. Multidrug-resistant Acinetobacter baumannii. Emerg. Infect. Dis. 11:22-29. http://dx.doi.org/10.3201/eid1101.040001.
-
(2005)
Emerg. Infect. Dis.
, vol.11
, pp. 22-29
-
-
Abbo, A.1
Navon-Venezia, S.2
Hammer-Muntz, O.3
Krichali, T.4
Siegman-Igra, Y.5
Carmeli, Y.6
-
10
-
-
0038673434
-
Surveillance for antimicrobial susceptibility among clinical isolates of Pseudomonas aeruginosa and Acinetobacter baumannii from hospitalized patients in the United States, 1998 to 2001
-
Karlowsky JA, Draghi DC, Jones ME, Thornsberry C, Friedland IR, Sahm DF. 2003. Surveillance for antimicrobial susceptibility among clinical isolates of Pseudomonas aeruginosa and Acinetobacter baumannii from hospitalized patients in the United States, 1998 to 2001. Antimicrob. Agents Chemother. 47:1681-1688. http://dx.doi.org/10.1128/AAC.47.5.1681-1688.2003.
-
(2003)
Antimicrob. Agents Chemother.
, vol.47
, pp. 1681-1688
-
-
Karlowsky, J.A.1
Draghi, D.C.2
Jones, M.E.3
Thornsberry, C.4
Friedland, I.R.5
Sahm, D.F.6
-
11
-
-
4344572020
-
Expression of the RND-type efflux pump AdeABC in Acinetobacter baumannii is regulated by the AdeRS two-component system
-
Marchand I, Damier-Piolle L, Courvalin P, Lambert T. 2004. Expression of the RND-type efflux pump AdeABC in Acinetobacter baumannii is regulated by the AdeRS two-component system. Antimicrob. Agents Chemother. 48:3298-3304. http://dx.doi.org/10.1128/AAC.48.9.3298-3304.2004.
-
(2004)
Antimicrob. Agents Chemother.
, vol.48
, pp. 3298-3304
-
-
Marchand, I.1
Damier-Piolle, L.2
Courvalin, P.3
Lambert, T.4
-
12
-
-
77957365300
-
Overexpression of resistance-nodulation-cell division pump AdeFGH confers multidrug resistance in Acinetobacter baumannii
-
Coyne S, Rosenfeld N, Lambert T, Courvalin P, Perichon B. 2010. Overexpression of resistance-nodulation-cell division pump AdeFGH confers multidrug resistance in Acinetobacter baumannii. Antimicrob. Agents Chemother. 54:4389-4393. http://dx.doi.org/10.1128/AAC.00155-10.
-
(2010)
Antimicrob. Agents Chemother.
, vol.54
, pp. 4389-4393
-
-
Coyne, S.1
Rosenfeld, N.2
Lambert, T.3
Courvalin, P.4
Perichon, B.5
-
13
-
-
38649116649
-
AdeIJK, a resistance-nodulation-cell division pump effluxing multiple antibiotics in Acinetobacter baumannii
-
Damier-Piolle L, Magnet S, Bremont S, Lambert T, Courvalin P. 2008. AdeIJK, a resistance-nodulation-cell division pump effluxing multiple antibiotics in Acinetobacter baumannii. Antimicrob. Agents Chemother. 52:557-562. http://dx.doi.org/10.1128/AAC.00732-07.
-
(2008)
Antimicrob. Agents Chemother.
, vol.52
, pp. 557-562
-
-
Damier-Piolle, L.1
Magnet, S.2
Bremont, S.3
Lambert, T.4
Courvalin, P.5
-
14
-
-
25844455664
-
+-coupled Acinetobacter baumannii multidrug efflux pump belonging to the MATE family of transporters
-
+-coupled Acinetobacter baumannii multidrug efflux pump belonging to the MATE family of transporters. Antimicrob. Agents Chemother. 49:4362-4364. http://dx.doi.org/10.1128/AAC.49.10.4362-4364.2005.
-
(2005)
Antimicrob. Agents Chemother.
, vol.49
, pp. 4362-4364
-
-
Su, X.-Z.1
Chen, J.2
Mizushima, T.3
Kuroda, T.4
Tsuchiya, T.5
-
15
-
-
67650732734
-
Triclosan resistance in clinical isolates of Acinetobacter baumannii
-
Chen Y, Pi B, Zhou H, Yu Y-S, Li L. 2009. Triclosan resistance in clinical isolates of Acinetobacter baumannii. J. Med. Microbiol. 58:1086-1091. http://dx.doi.org/10.1099/jmm.0.008524-0.
-
(2009)
J. Med. Microbiol.
, vol.58
, pp. 1086-1091
-
-
Chen, Y.1
Pi, B.2
Zhou, H.3
Yu, Y.-S.4
Li, L.5
-
17
-
-
3042615882
-
Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs
-
Chevreux B, Pfisterer T, Drescher B, Driesel AJ, Müller WEG, Wetter T, Suhai S. 2004. Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs. Genome Res. 14:1147-1159. http://dx.doi.org/10.1101/gr.1917404.
-
(2004)
Genome Res.
, vol.14
, pp. 1147-1159
-
-
Chevreux, B.1
Pfisterer, T.2
Drescher, B.3
Driesel, A.J.4
Müller, W.E.G.5
Wetter, T.6
Suhai, S.7
-
18
-
-
43149115851
-
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829. http://dx.doi.org/10.1101/gr.074492.107.
-
(2008)
Genome Res.
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
-
19
-
-
67649884743
-
Fast and accurate short read alignment with Burrows-Wheeler transform
-
Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25:1754-1760. http://dx.doi.org/10.1093/bioinformatics/btp324.
-
(2009)
Bioinformatics
, vol.25
, pp. 1754-1760
-
-
Li, H.1
Durbin, R.2
-
20
-
-
79955483667
-
A framework for variation discovery and genotyping using next-generation DNA sequencing data
-
DePristo MA, Banks E, Poplin R, Garimella KV, Maguire JR, Hartl C, Philippakis AA, del Angel G, Rivas MA, Hanna M, McKenna A, Fennell TJ, Kernytsky AM, Sivachenko AY, Cibulskis K, Gabriel SB, Altshuler D, Daly MJ. 2011. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet. 43:491-498. http://dx.doi.org/10.1038/ng.806.
-
(2011)
Nat. Genet.
, vol.43
, pp. 491-498
-
-
DePristo, M.A.1
Banks, E.2
Poplin, R.3
Garimella, K.V.4
Maguire, J.R.5
Hartl, C.6
Philippakis, A.A.7
Del Angel, G.8
Rivas, M.A.9
Hanna, M.10
McKenna, A.11
Fennell, T.J.12
Kernytsky, A.M.13
Sivachenko, A.Y.14
Cibulskis, K.15
Gabriel, S.B.16
Altshuler, D.17
Daly, M.J.18
-
21
-
-
77956534324
-
ANNOVAR: Functional annotation of genetic variants from high-throughput sequencing data
-
Wang K, Li M, Hakonarson H. 2010. ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data. Nucleic Acids Res. 38:e164. http://dx.doi.org/10.1093/nar/gkq603.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. e164
-
-
Wang, K.1
Li, M.2
Hakonarson, H.3
-
22
-
-
84875634162
-
Integrative Genomics Viewer (IGV): High-performance genomics data visualization and exploration
-
Thorvaldsdóttir H, Robinson JT, Mesirov JP. 2013. Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration. Brief. Bioinform. 14:178-192. http://dx.doi.org/10.1093/bib/bbs017.
-
(2013)
Brief. Bioinform.
, vol.14
, pp. 178-192
-
-
Thorvaldsdóttir, H.1
Robinson, J.T.2
Mesirov, J.P.3
-
23
-
-
79953848211
-
Activity of the efflux pump inhibitor phenylalanine-arginine beta-naphthylamide against the AdeFGH pump of Acinetobacter baumannii
-
Cortez-Cordova J, Kumar A. 2011. Activity of the efflux pump inhibitor phenylalanine-arginine beta-naphthylamide against the AdeFGH pump of Acinetobacter baumannii. Int. J. Antimicrob. Agents 37:420-424. http://dx.doi.org/10.1016/j.ijantimicag.2011.01.006.
-
(2011)
Int. J. Antimicrob. Agents
, vol.37
, pp. 420-424
-
-
Cortez-Cordova, J.1
Kumar, A.2
-
24
-
-
21444457864
-
A Tn7-based broad-range bacterial cloning and expression system
-
Choi KH, Gaynor JB, White KG, Lopez C, Bosio CM, Karkhoff-Schweizer RR, Schweizer HP. 2005. A Tn7-based broad-range bacterial cloning and expression system. Nat. Methods 2:443-448. http://dx.doi.org/10.1038/nmeth765.
-
(2005)
Nat. Methods
, vol.2
, pp. 443-448
-
-
Choi, K.H.1
Gaynor, J.B.2
White, K.G.3
Lopez, C.4
Bosio, C.M.5
Karkhoff-Schweizer, R.R.6
Schweizer, H.P.7
-
25
-
-
32244448730
-
A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: Application for DNA fragment transfer between chromosomes and plasmid transformation
-
Choi KH, Kumar A, Schweizer HP. 2006. A 10-min method for preparation of highly electrocompetent Pseudomonas aeruginosa cells: application for DNA fragment transfer between chromosomes and plasmid transformation. J. Microbiol. Methods 64:391-397. http://dx.doi.org/10.1016/j.mimet.2005.06.001.
-
(2006)
J. Microbiol. Methods
, vol.64
, pp. 391-397
-
-
Choi, K.H.1
Kumar, A.2
Schweizer, H.P.3
-
26
-
-
0035139556
-
Cross-resistance between triclosan and antibiotics in Pseudomonas aeruginosa is mediated by multidrug efflux pumps: Exposure of a susceptible mutant strain to triclosan selects nfxB mutants overexpressing MexCD-OprJ
-
Chuanchuen R, Beinlich K, Hoang TT, Becher A, Karkhoff-Schweizer RR, Schweizer HP. 2001. Cross-resistance between triclosan and antibiotics in Pseudomonas aeruginosa is mediated by multidrug efflux pumps: exposure of a susceptible mutant strain to triclosan selects nfxB mutants overexpressing MexCD-OprJ. Antimicrob. Agents Chemother. 45:428-432. http://dx.doi.org/10.1128/AAC.45.2.428-432.2001.
-
(2001)
Antimicrob. Agents Chemother.
, vol.45
, pp. 428-432
-
-
Chuanchuen, R.1
Beinlich, K.2
Hoang, T.T.3
Becher, A.4
Karkhoff-Schweizer, R.R.5
Schweizer, H.P.6
-
27
-
-
0033574422
-
Mechanism of triclosan inhibition of bacterial fatty acid synthesis
-
Heath RJ, Rubin JR, Holland DR, Zhang E, Snow ME, Rock CO. 1999. Mechanism of triclosan inhibition of bacterial fatty acid synthesis. J. Biol. Chem. 274:11110-11114. http://dx.doi.org/10.1074/jbc.274.16.11110.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 11110-11114
-
-
Heath, R.J.1
Rubin, J.R.2
Holland, D.R.3
Zhang, E.4
Snow, M.E.5
Rock, C.O.6
-
28
-
-
0032859660
-
Characterization of the Pseudomonas aeruginosa enoyl-acyl carrier protein reductase: A target for triclosan and its role in acylated homoserine lactone synthesis
-
Hoang TT, Schweizer HP. 1999. Characterization of the Pseudomonas aeruginosa enoyl-acyl carrier protein reductase: a target for triclosan and its role in acylated homoserine lactone synthesis. J. Bacteriol. 181:5489-5497.
-
(1999)
J. Bacteriol.
, vol.181
, pp. 5489-5497
-
-
Hoang, T.T.1
Schweizer, H.P.2
-
29
-
-
0035178557
-
Resistance-nodulation-cell division-type efflux pump involved in aminoglycoside resistance in Acinetobacter baumannii strain BM4454
-
Magnet S, Courvalin P, Lambert T. 2001. Resistance-nodulation-cell division-type efflux pump involved in aminoglycoside resistance in Acinetobacter baumannii strain BM4454. Antimicrob. Agents Chemother. 45:3375-3380. http://dx.doi.org/10.1128/AAC.45.12.3375-3380.2001.
-
(2001)
Antimicrob. Agents Chemother.
, vol.45
, pp. 3375-3380
-
-
Magnet, S.1
Courvalin, P.2
Lambert, T.3
-
30
-
-
84878300935
-
Antibiotic resistance and expression of resistance-nodulation-division pumps and outer membrane porins in Acinetobacter species isolated from Canadian hospitals
-
Fernando D, Zhanel G, Kumar A. 2013. Antibiotic resistance and expression of resistance-nodulation-division pumps and outer membrane porins in Acinetobacter species isolated from Canadian hospitals. Can. J. Infect. Dis. Med. Microbiol. 24:17-21.
-
(2013)
Can. J. Infect. Dis. Med. Microbiol.
, vol.24
, pp. 17-21
-
-
Fernando, D.1
Zhanel, G.2
Kumar, A.3
-
31
-
-
84860210231
-
Expression of the resistance-nodulation-cell division pump AdeIJK in Acinetobacter baumannii is regulated by AdeN, a TetR-type regulator
-
Rosenfeld N, Bouchier C, Courvalin P, Périchon B. 2012. Expression of the resistance-nodulation-cell division pump AdeIJK in Acinetobacter baumannii is regulated by AdeN, a TetR-type regulator. Antimicrob. Agents Chemother. 56:2504-2510. http://dx.doi.org/10.1128/AAC.06422-11.
-
(2012)
Antimicrob. Agents Chemother.
, vol.56
, pp. 2504-2510
-
-
Rosenfeld, N.1
Bouchier, C.2
Courvalin, P.3
Périchon, B.4
-
32
-
-
36549000278
-
CarO, an Acinetobacter baumannii outer membrane protein involved in carbapenem resistance, is essential for L-ornithine uptake
-
Mussi MA, Relling VM, Limansky AS, Viale AM. 2007. CarO, an Acinetobacter baumannii outer membrane protein involved in carbapenem resistance, is essential for L-ornithine uptake. FEBS Lett. 581:5573-5578. http://dx.doi.org/10.1016/j.febslet.2007.10.063.
-
(2007)
FEBS Lett.
, vol.581
, pp. 5573-5578
-
-
Mussi, M.A.1
Relling, V.M.2
Limansky, A.S.3
Viale, A.M.4
-
33
-
-
29144515453
-
Identification of an OprD homologue in Acinetobacter baumannii
-
Dupont M, Pagès J-M, Lafitte D, Siroy A, Bollet C. 2005. Identification of an OprD homologue in Acinetobacter baumannii. J. Proteome Res. 4:2386-2390. http://dx.doi.org/10.1021/pr050143q.
-
(2005)
J. Proteome Res.
, vol.4
, pp. 2386-2390
-
-
Dupont, M.1
Pagès, J.-M.2
Lafitte, D.3
Siroy, A.4
Bollet, C.5
-
34
-
-
33749511442
-
Method for regulated expression of single-copy efflux pump genes in a surrogate Pseudomonas aeruginosa strain: Identification of the BpeEF-OprC chloramphenicol and trimethoprim efflux pump of Burkholderia pseudomallei 1026b
-
Kumar A, Chua KL, Schweizer HP. 2006. Method for regulated expression of single-copy efflux pump genes in a surrogate Pseudomonas aeruginosa strain: identification of the BpeEF-OprC chloramphenicol and trimethoprim efflux pump of Burkholderia pseudomallei 1026b. Antimicrob. Agents Chemother. 50:3460-3463. http://dx.doi.org/10.1128/AAC.00440-06.
-
(2006)
Antimicrob. Agents Chemother.
, vol.50
, pp. 3460-3463
-
-
Kumar, A.1
Chua, K.L.2
Schweizer, H.P.3
-
35
-
-
0026011792
-
Cloning and characterization of a DNA fragment that complements the nfxB mutation in Pseudomonas aeruginosa PAO
-
Okazaki T, Iyobe S, Hashimoto H, Hirai K. 1991. Cloning and characterization of a DNA fragment that complements the nfxB mutation in Pseudomonas aeruginosa PAO. FEMS Microbiol. Lett. 63:31-35.
-
(1991)
FEMS Microbiol. Lett.
, vol.63
, pp. 31-35
-
-
Okazaki, T.1
Iyobe, S.2
Hashimoto, H.3
Hirai, K.4
-
36
-
-
18244367643
-
Molecular characterization of MexL, the transcriptional repressor of the mexJK multidrug efflux operon in Pseudomonas aeruginosa
-
Chuanchuen R, Gaynor JB, Karkhoff-Schweizer R, Schweizer HP. 2005. Molecular characterization of MexL, the transcriptional repressor of the mexJK multidrug efflux operon in Pseudomonas aeruginosa. Antimicrob. Agents Chemother. 49:1844-1851. http://dx.doi.org/10.1128/AAC.49.5.1844-1851.2005.
-
(2005)
Antimicrob. Agents Chemother.
, vol.49
, pp. 1844-1851
-
-
Chuanchuen, R.1
Gaynor, J.B.2
Karkhoff-Schweizer, R.3
Schweizer, H.P.4
-
37
-
-
0030924134
-
Fatty acid biosynthesis in Pseudomonas aeruginosa: Cloning and characterization of the fabAB operon encoding β-hydroxydecanoyl-acyl carrier protein dehydratase (FabA) and β-ketoacyl-acyl carrier protein synthase I (FabB)
-
Hoang TT, Schweizer HP. 1997. Fatty acid biosynthesis in Pseudomonas aeruginosa: cloning and characterization of the fabAB operon encoding β-hydroxydecanoyl-acyl carrier protein dehydratase (FabA) and β-ketoacyl-acyl carrier protein synthase I (FabB). J. Bacteriol. 179:5326-5332.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 5326-5332
-
-
Hoang, T.T.1
Schweizer, H.P.2
-
38
-
-
84863028109
-
Growth phase-dependent expression of RND efflux pump- and outer membrane porin-encoding genes in Acinetobacter baumannii ATCC 19606
-
Fernando D, Kumar A. 2012. Growth phase-dependent expression of RND efflux pump- and outer membrane porin-encoding genes in Acinetobacter baumannii ATCC 19606. J. Antimicrob. Chemother. 67:569-572. http://dx.doi.org/10.1093/jac/dkr519.
-
(2012)
J. Antimicrob. Chemother.
, vol.67
, pp. 569-572
-
-
Fernando, D.1
Kumar, A.2
|