Detection and characterization of biological and other organic-carbon aerosol particles in atmosphere using fluorescence

Journal of Quantitative Spectroscopy and Radiative Transfer

Volumn 150, Issue , 2015, Pages 12-35

  Pan, Yong Le ^a  

^a U S ARMY RESEARCH LABORATORY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CARBON AEROSOLS;

AEROSOL; DETECTION METHOD; LASER INDUCED FLUORESCENCE; ORGANIC CARBON; PARTICULATE MATTER;

EID: 84908151995     PISSN: 00224073     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jqsrt.2014.06.007     Document Type: Article

References (105)

1. Atkins J., Thomas M.E., Joseph R.I. Spectrally resolved fluorescence cross sections of BG and BT with a 266-nm pump wavelength. Chemical and Biological Sensing VIII 2007, vol. 6554. Proceedings of SPIE, (65540T1-8).
2. Bailey R., Fielding L., Young A., Griffith C. Effect of ozone and open air factor against aerosolized Micrococcus luteus. J Food Prot 2007, 70(12):2769-2773.
3. Bauer H., Schueller E., Weinke G., Berger A., Hitzenberger R., Marr I.L., et al. Significant contributions of fungal spores to the organic carbon and to the aerosol mass balance of the urban atmospheric aerosol. Atmos Environ 2008, 42:5542-5549.
4. Berlett B.S., Levine R.L., Stadtman E.R. Comparison of the effects of ozone on the modification of amino acid residues in glutamine synthetase and bovine serum albumin. J Biol Chem 1996, 271(8):4177-4182.
5. Bones D.L., Henricksen D.K., Mang S.A., Gonsior M., Bateman A.P., Nguyen T.B., et al. Appearance of strong absorbers and fluorophores in limonene-O3 secondary organic aerosol due to NH+4-mediated chemical aging over long time scales. J Geophys Res 2010, 115:D05203.
6. Boutou V., Favre C., Hill S.C., Pan Y.L., Chang R.K., Wolf J.P. Backward enhanced emission from multiphoton processes in aerosols. App Phys B 2002, 755(2-):145-153.
7. Buteau S., Simard J.R., Nadeau D. Characterization of laser induced fluorescence from background aerosols in a maritime environment. Proc SPIE 2011, 8018. (801803-1-11).
8. Cabredo S., Parra A., Sáenz C., Anzano J. Bioaerosols chemometric characterization by laser-induced fluorescence: air sample analysis. Talanta 2009, 77:1837-1842.
9. Carrera M., Zandomeni R.O., Fitzgibbon J., Sagripanti J.L. Difference between the spore osizes of Bacillus anthracis and other Bacillus species. J Appl Microbiol 2006, 102:303-312.
10. Cheng Y.S., Barr E.B., Fan B.J., Hargis P.J., Rader D.J., O'Hern T.J., et al. Detection of bioaerosols using multiwavelength UV fluorescence spectroscopy. Aerosol Sci Technol 1999, 30:186-201.
11. Courvoisier F., Boutou V., Wood V., Bartelt A., Roth M., Rabitz H., et al. Bacteria from background urban aerosols. Appl Phys Lett 2005, 87(5):63901-63903.
12. Courvoisier F., Boutou V., Guyon L., Roth M., Rabitz H., Wolf J.-P. Discriminating bacteria from other atmospheric particles using femtosecond molecular dynamics. J Photochem Photobiol A: Chem 2006, 180(3):300-306.
13. Courvoisier F., Bonacina L., Boutou V., Guyon L., Bonnet C., Thuillier B., et al. Identification of biological microparticles using ultrafast depletion spectroscopy. Faraday Discuss 2008, 137:37-49.
14. Deguillaume L., Leriche M., Amato P., Ariya P.A., Delort A.-M., Proschl U., et al. Microbiology and atmospheric processes: chemical interactions of primary biological aerosols. Biogeosciences 2008, 5:1073-1084.
15. Dery B., Buteau S., Simard J.-R., Bouchard J.-P., Vallee R. Spectroscopic calibration correlation of field and lab-sized fluorescence lidar systems. IEEE Trans Geosci Remote Sens 2010, 48:3580-3586.
16. Després V.R., Huffman J.A., Burrows S.M., Hoose C., Safatov A.S., Buryak G., et al. Primary biological aerosol particles in the atmosphere: a review. Tellus B 2012, 64:15598.
17. Duarte R.M.B.O., Pio C.A., Duarte A.C. Spectroscopic study of the water-soluble organic matter isolated from atmospheric aerosols collected under different atmospheric conditions. Anal Chim Acta 2005, 530:7-14.
18. Dungan R.S. Fate and transport of bioaerosols associated with livestock operations and manures. J Anim Sci 2010, 88:3693-3706.
19. Eversole J.D., Hardgrove J.J., Cary W.K., Choulas D.P., Seaver M. Continuous, rapid biological aerosol detection with the use of UV fluorescence: outdoor test results. Field Anal Chem Technol 1999, 3:249-259.
20. Faris GW, Williams A, Carlisle CB, Bronk BV. Spectrally resolved absolute fluorescence cross sections of B. Globigii and B. Cereus, SRI technical note. SRI project 2913; 1992.
21. Faris G.W., Copeland R.A., Mortelmans K., Bronk B.V. Spectrally resolved absolute fluorescence cross sections for bacillus spores. Appl Opt 1997, 36(4):958-967.
22. Farsund O., Rustad G., Kasen I., Haavardsholm T.V. Required spectral resolution for bioaerosol detection algorithms using standoff laser-induced fluorescence measurements. IEEE Sens J 2010, 10:655-661.
23. Fujimori E. Changes induced by ozone and ultraviolet light in type I collagen Bovine Achilles tendon collagen versus rat tail tendon collagen. Eur J Biochem 1985, 152(2):299-306.
24. Gabey A.M., Gallagher M.W., Whitehead J., Dorsey J.R., Kaye P.H., Stanley W.R. Measurements and comparison of primary biological aerosol above and below a tropical forest canopy using a dual channel fluorescence spectrometer. Atmos Chem & Phys 2010, 10:4453-4466.
25. Gabey A.M., Stanley W.R., Gallagher M.W., Kaye P.H. The fluorescence properties of aerosol larger than 0.8mu m in urban and tropical rainforest locations. Atmos Chem & Phys 2011, 11(11):5491-5504.
26. Gabey A.M., Vaitilingom M., Freney E., Boulon J., Sellegri K., Gallagher M.W., et al. Observations of fluorescent and biological aerosol at a high-altitude site in central France. Atmos Chem Phys 2013, 13(15):7415-7428.
27. Hairston P.P., Ho J., Quant F.R. Design of an instrument for real-time detection of bioaerosols using simultaneous measurement of particle aerodynamic size and intrinsic fluorescence. J Aerosol Sci 1997, 28:471-482.
28. Healy D.A., O'Connor D.J., Burke A.M., Sodeau J.R. A laboratory assessment of the Waveband Integrated Bioaerosol Sensor (WIBS-4) using individual samples of pollen and fungal spore material. Atmos Environ 2012, 60:534-543.
29. Hill S.C., Pinnick R.G., Pan Y.L., Holler S., Chang R.K., Bottiger J.R., et al. Real-time measurement of fluorescence spectra from single airborne biological particles. Field Anal Chem Technol 1999, 3:221-239.
30. Hill S.C., Boutou V., Yu J., Ramstein S., Wolf J.P., Pan Y.L., et al. Enhanced backward-directed multi-photon-excited fluorescence from dielectric microcavity. Phys Rev Lett 2000, 85(1):54-57.
31. Hill S.C., Pinnick R.G., Niles S., Fell N.F., Pan Y.L., Bottiger J., et al. Fluorescence from air-borne microparticles: dependence on size, concentration of fluorophores, and illumination intensity. Appl Opt 2001, 40:3005-3013.
32. Hill SC, Mayo MW, Chang RK., Fluorescence of bacteria, pollens, and naturally occurring airborne particles: excitation/emission spectra. ARL-TR-4722; 2009.
33. Hill S.C., Pan Y.L., Williamson C., Santarpia J.L., Hill H.H. Fluorescence of bioaerosols: mathematical model including primary fluorescing and absorbing molecules in bacteria. Opt Express 2013, 21(19):22285.
34. Huffman J.A., Treutlein B., Poschl U. Fluorescent biological aerosol particle concentrations and size distributions measured with an Ultraviolet Aerodynamic Particle Sizer (UV-APS) in Central Europe. Atmos Chem Phys 2010, 10:3215-3233.
35. Hermes H, Pan YL, Hill SC, Chang RK, Deposition of selected airborne particles into a microfluidic flow cytometer for bioanalysis. ARL-TR-4446; 2008.
36. Ignatenko A.V., Tatarino B.A., Khovratovich N.N., Khrapovitskii V.P., Cherenkevich S.N. Spectral-fluorescent investigation of the action of ozone on aromatic amino acids. J Appl Spectrosc 1982, 37(1):781-784.
37. Ignatenko A.V. Use of the method of tryptophan fluorescence to characterize disruptions of the structure of ozonized proteins. J Appl Spectrosc 1988, 49(1):691-695.
38. Jung J.H., Lee J.E. Variation in the fluorescence intensity of thermally-exposed bacterial bioaerosols. J Aerosol Sci 2013, 65:101-110.
39. Kananga H., Hargreavesa M., Ristovskia Z., Morawskaa L. Performance assessment of UVAPS: influence of fungal spore age and air exposure. J Aerosol Sci 2007, 38:83-96.
40. Kasparian J., Boutou V., Wolf J.P., Pan Y.L., Chang R.K. Angular distribution of non-linear optical emission from spheroidal microparticles. Appl Phys B 2008, 91(1):167-171.
41. Kaye P.H., Barton J.E., Hirst E., Clark J.M. Simultaneous light scattering and intrinsic fluorescence measurement for the classification of airborne particles. Appl Opt 2000, 39:3738-3745.
42. Kaye, P.H.P.H., Stanley W.R., Hirst E., Foot E.V., Baxter K.L., Barrington S.J. Single particle multichannel bio-aerosol fluorescence sensor. Opt Express 2005, 13:3583-3593.
43. Killinger D.K., Menyuk N. laser remote-sensing of the atmosphere. Science 1987, 235(4784):37-45.
44. Kiselev D., Bonacina L., Wolf J.-P. Individual bioaerosol particle discrimination by multi-photon excited fluorescence. Opt Express 2011, 19(24):24516-24521.
45. Kiselev D., Bonacina L., Wolf J.-P. A flash-lamp based device for fluorescence detection and identification of individual pollen grains. Rev Sci Instrum 2013, 84(3):033302.
46. Klapper L., Mcknight D., Robinfolton J., Blunt-Harris E.L., Nevin K.P., Lovley D.R., et al. Fulvic acid oxidation state detection using fluorescence spectroscopy. Environ Sci Technol 2002, 36:3170-3175.
47. Kochelaev E.A., Volchek A.O., Elizarov B.A., Pribor N.P.O., Petersburg St., Sidorenko V.M. Study of the angular fluorescence distribution of bioaerosol particles: modeling and experiment. J Opt Technol 2012, 79(6):1070-1077.
48. Kotiaho T., Eberlin M.N., Vainiotalo P., Kostiainen R. Electrospray mass and tandem mass spectrometry identification of ozone oxidation products of amino acids and small peptides. J Am Soc Mass Spectrom 2000, 11:526-535.
49. Krivacsy Z., Kiss G., Ceburnis D., Jennings G., Maenhaut W., Salma I., et al. Study of water-soluble atmospheric humic matter in urban andmarine environments. Atmos Res 2008, 87:1-12.
50. Kunnil J., Sarasanandarajah S., Chacko E., Reinisch L. Fluorescence quantum efficiency of dry Bacillus globigii spores. Opt Express 2005, 13(22):8969-8979.
51. Laflamme C., Simard J.-R., Buteau S., Lahaie P., Nadeau D., Déry B., et al. Effect of growth media and washing on the spectral signatures of aerosolized biological stimulants. Appl Opt 2011, 50(6):788-796.
52. Lakowicz J.R. Principles of fluorescence spectroscopy 2006, 341-343. Plenum, New York.
53. Manninen A., Putkiranta M., Saarela J., Rostedt A., Sorvajärvi T., Toivonen J., et al. Fluorescence cross sections of bioaerosols and suspended biological agents. Appl Opt 2009, 48(22):4320-4328.
54. Lee H.J., Laskin A., Laskin J., Nizkorodov S.A. Excitation-emission spectra and fluorescence quantum yields for fresh and aged biogenic secondary organic aerosols. Environ Sci Technol 2013, 47:5763-5770.
55. Matthews B.J.H., Jones A.C., Theodorou N.K., Tudhope A.W. Excitation-emission-matrix fluorescence spectroscopy applied to humic acid bands in coral reefs. Mar Chem 1996, 55:317-332.
56. Measures R.M. Laser remote sensing - fundamentals and applications 1992, Krieger Publishing Company, Malabar, Florida.
57. Mejean G., Kasparian J., Yu J., Frey S., Salmon E., Wolf J.-P. Remote detection and identification of biological aerosols using a femtosecond terawatt lidar system. Appl Phys B 2004, 78:535-537.
58. Mitsumoto K., Yabusaki K., Kobayashi K., Aoyagi H. Development of a novel real-time pollen-sorting counter using species-specific pollen autofluorescence. Aerobiologia 2010, 26:99-111.
59. Mudd J.B., Dawson P.J., Tseng S., Liu F.P. Reaction of ozone with protein tryptophans: band III, serum albumin, and cytochrome C. Arch Biochem Biophys 1997, 388:143-149.
60. Muller C.L., Baker A., Hutchinson R., Fairchild I.J., Kidd C. Analysis of rainwater dissolved organic carbon compounds using fluorescence spectrophotometry. Atmos Environ 2008, 42:8036-8045.
61. Nisimoto Y., Shibata Y. Studies on FAD- and FMN-binding domains in NADPH-cytochrome P-450 reductase from rabbit liver microsomes. J Biol Chem 1982, 257(21):12532-12539.
62. Pan Y.L., Holler S., Chang R.K., Hill S.C., Pinnick R.G., Niles S., et al. Single-shot fluorescence spectra of individual micrometersized bioaerosols illuminated by a 351- or a 266-nm ultraviolet laser. Opt Lett 1999, 24:116-118.
63. Pan Y.L., Cobler P., Rhodes S., Potter A., Chou T., Holler S., et al. High-speed, high-sensitivity aerosol fluorescence spectrum detection using a 32-anode photomultiplier tube detector. Rev Sci Instrum 2001, 72:1831-1836.
64. Pan Y.L., Pinnick R.G., Hill S.C., Niles S., Holler S., Bottiger J.R., et al. Dynamics of photon-induced degradation and fluorescence in riboflavin microparticles. Appl Phys B 2001, 72(4):449-454.
65. Pan Y.L., Hartings J., Pinnick R.G., Hill S.C., Halvorson J., Chang R.K. Single-particle fluorescence spectrometer for ambient aerosols. Aerosol Sci Technol 2003, 37:628-639.
66. Pan Y.L., Boutou V.E., Bottiger J.R., Zhang S.S., Wolf J.P., Chang R.K. A puff of air sorts bioaerosols for pathogen identification. Aerosol Sci Technol 2004, 38(6):598-602.
67. Pan Y.L., Eversole J.D., Kaye P., Foote V., Pinnick R.G., Hill S.C., et al. Bio-aerosol Fluorescence. Optics of Biological Particles (NATO Science Series II: Mathematics Physics and Chemistry) 2006, 63-164. Springer. A. Hoekstra, V. Maltsev, G. Videen (Eds.).
68. Pan Y.L., Pinnick R.G., Hill S.C., Rosen J.M., Chang R.K. Single-particle laser-induced-fluorescence spectra of biological and other organic-carbon aerosols in the atmosphere: measurements at New Haven, CT and Las Cruces, NM, USA. J Geophys Res 2007, 112:D24S19.
69. Pan Y.L., Pinnick R.G., Hill S.C., Chang R.K. Particle-fluorescence spectrometer for real-time measurements of atmospheric organic carbon and biological aerosol. Environ Sci Technol 2009, 43:429-434.
70. Pan Y.L., Hill S.C., Pinnick R.G., Huang H., Bottiger J.R., Chang R.K. Fluorescence spectra of atmospheric aerosol particles measured using one or two excitation wavelengths: comparison of classification schemes employing different emission and scattering results. Opt Express 2010, 18(12):12436-12457.
71. Pan Y.L., Hill S.C., Pinnick R.G., House J.M., Flagan R.C., Chang R.K. Dual-excitation-wavelength fluorescence spectra and elastic scattering for differentiation of single airborne pollen and fungal particles. Atmos Environ 2011, 45:1555-1563.
72. Pan Y.L., Huang H., Chang R.K. Clustered and integrated fluorescence spectra from single atmospheric aerosol particles excited by 263nm and 351nm laser at New Haven, Connecticut and Adelphi, Maryland. J Quant Spectrosc Radiat Transf 2012, 113(17):2213-2221.
73. Pan Y.L., Houck J.D.T., Clark P.A., Pinnick R.G. Single particle size and fluorescence spectrum from emission of burning materials in a tube furnace to simulate burn pit. Appl Phys B: Lasers Opt 2013, 112(1):89-98.
74. Pan Y.L., Hill S.C., Santarpia J.L., Brinkley K., Sickler T., Coleman M., et al. Spectrally-resolved fluorescence cross sections of aerosolized biological live agents and simulants using five excitation wavelengths in a BSL-3 laboratory. Opt Express 2014, 22:8165-8189.
75. Pan Y.L., Santarpia J.L., Ratnesar-Shumate S., Corson E., Eshbaugh J., Hill S.C., et al. Effects of ozone and relative humidity on fluorescence spectra of octapeptide bioaerosol particles. J Quant Spectrosc Radiat Transf 2014, 133:538-550.
76. Pecciaa J., Hernandez M. Incorporating polymerase chain reaction-based identification, population characterization, and quantification of microorganisms into aerosol science: a review. Atmos Environ 2006, 40:3941-3961.
77. Pinnick R.G., Hill S.C., Nachman P., Pendleton J.D., Fernandez G.L., Mayo M.W., et al. Fluorescence Particle Counter for Detecting Airborne Bacteria and Other Biological Particles. Aerosol Sci Technol 1995, 23:653-664.
78. Pinnick R.G., Hill S.C., Pan Y.L., Chang R.K. Fluorescence spectra of atmospheric aerosol at Adelphi, Maryland, USA; measurement and classification of single particles containing organic carbon. Atmos Environ 2004, 38:1657-1672.
79. Pinnick R.G., Fernandez E., Rosen J.M, Hill S.C, Wang Y., Pan Y.L. Fluorescence spectra and elastic scattering characteristics of atmospheric aerosol particles in Las Cruces, New Mexico, USA: time series of particle concentrations in various spectral clusters. Atmos Environ 2013, 65:195-204.
80. Pohlker C., Huffman J.A., Poschl U. Autofluorescence of atmospheric bioaerosols - fluoresct biomolecules and potential inferences. Atmos Meas Technol 2012, 5:37-71.
81. Poschl U. Atmospheric aerosols: composition, transformation, climate and health effects. Angew Chem-Int Ed 2005, 44(46):7520-7540.
82. Ratnesar-Shumate S., Wagner M.L., Kerechanin C., House G., Brinkley K.M., Bare C., et al. Improved method for the evaluation of real-time biological aerosol detection technologies. Aerosol Sci Technol 2011, 45(5):635-644.
83. Reyes F.L., Jeys T.H., Newbury N.R., Primmerman C.A., Rowe G.S., Sanchez A. Bio-aerosol fluorescence sensor. Field Anal Chem Technol 1999, 3:240-248.
84. Robinson N.H., Allan J.D., Huffman J.A., Kaye P.H., Foot V.E., Gallagher M. Cluster analysis of WIBS single-particle bioaerosol data. Atmos Meas Technol 2013, 6:337-347.
85. Roshchina V.V., Melnikova E.V. Pollen chemosensitivity to ozone and peroxides. Russ J Plant Physiol 2001, 48(1):74-83.
86. Roshchina V.V. Autofluorescence of plant secreting cells as a biosensor and bioindicator reaction. J Fluorescence 2003, 13(5):403-420.
87. Rudich Y., Donahue N.M., Mentel T.F. Aging of organic aerosol: bridging the gap between laboratory and field studies. Ann Rev Phys Chem 2007, 58:321-352.
88. Saari S.E., Putkiranta M.J., Keskinen J. Fluorescence spectroscopy of atmospherically relevant bacterial and fungal spores and potential interferences. Atmos Environ 2013, 71:202-209.
89. Saari S.E., Reponen T., Keskinen J. Performance of two fluorescence-based real-time bioaerosol detectors: BioScout vs. UVAPS. Aerosol Sci Technol 2014, 48(4):371-378.
90. Santos P.S.M., Duarte R.M.B.O., Duarte A.C. Absorption and fluorescence properties of rainwater during the cold season at a town in Western Portugal. J Atmos Chem 2009, 62:45-57.
91. Santarpia J.L., Pan Y.L., Hill S.C., Baker N., Cottrell B., McKee L., et al. Changes in fluorescence spectra of bioaerosols exposed to ozone in a laboratory reaction chamber to simulate atmospheric aging. Opt Express 2012, 20(28):29867-29881.
92. Satterwhite MB. Luminescence of some airborne plant materials. ; 1995. http://oai.dtic.mil/oai/oai?verb=getRecord&metadataPrefix=html&identifier=ADA355121.
93. Seaver M., Eversole J.D., Hardgrove J.J., Cary W.K., Roselle D.C. Size and fluorescence measurements for field detection of biological aerosols. Aerosol Sci Technol 1999, 30:174-185.
94. Simard J.R., Roy G., Mathieu P., Larochelle V., McFee J., Ho J. Standoff sensing of bioaerosols using intensified range-gated spectral analysis of laser-induced fluorescence. IEEE Trans Geosci Remote Sens 2004, 42(4):865-874.
95. Sivaprakasam V., Huston A., Scotto C., Eversole J. Multiple UV wavelength excitation and fluorescence of bioaerosols. Opt Express 2004, 12(19):4457-4466.
96. Sivaprakasam V., Pletcher T., Tucker J.E., Huston A.L., McGinn J., Keller D., et al. Classification and selective collection of individual aerosol particles using laser-induced fluorescence. Appl Opt 2009, 48(4):B126-B136.
97. Sivaprakasam V., Lin H.B., Huston A.L., Eversole J.D. Spectral characterization of biological aerosol particles using two-wavelength excited laser-induced fluorescence and elastic scattering measurements. Opt Express 2011, 19(7):6191-6208.
98. Stephens JR. Measurements of the ultraviolet fluorescence cross sections and spectra of bacillus anthracis simulants. Los Alamos National Lab Report, LAUR-98-4173; May 1999.
99. Sugimoto N., Huang Z.W., Nishizawa T., Matsui I., Tatarov B. Fluorescence from atmospheric aerosols observed with a multi-channel lidar spectrometer. Opt Express 2012, 20(19):20800-20807.
100. Taketani F., Kanaya Y., Nakamura T., Koizumi K., Moteki N., Takegawa N.J. Measurement of fluorescence spectra from atmospheric single submicron particle using laser-induced fluorescence technique. Aerosol Sci 2013, 58:1-8.
101. Toprak E., Schnaiter M. Fluorescent biological aerosol particles measured with the Waveband Integrated Bioaerosol Sensor WIBS-4: laboratory tests combined with a one year field study. Atmos Chem Phys 2013, 13:225-243.
102. Vanderbeek R, Castle M. et al.. Laser based stand-off detection of biological agents. RTO technical report (TR-SET-098); 2010.
103. Weichert R., Klemm W., Legenhausen K., Pawellek C. Determination of fluorescence cross-sections of biological aerosols part. Syst Charact 2002, 19:216-222.
104. Winiwarter W., Bauer H., Caseiro A., Puxbaum H. Quantifying emissions of primary biological aerosol particle mass in Europe. Atmos Environ 2009, 43:1403-1409.
105. Adhikari A., Reponen T., Grinshpun S.A., Martuzevicius D., LeMasters G. Correlation of ambient inhalable bioaerosols with particulate matter and ozone: a two-year study. Environ Pollut 2006, 104:16-28.