Extremely low Helicobacter pylori prevalence in North Sulawesi, Indonesia and identification of a Maori-tribe type strain: A cross sectional study

Gut Pathogens

Volumn 6, Issue 1, 2014, Pages

  Miftahussurur, Muhammad ^a,b   Tuda, Josef ^c   Suzuki, Rumiko ^a   Kido, Yasutoshi ^a   Kawamoto, Fumihiko ^a   Matsuda, Miyuki ^a   Tantular, Indah S ^b   Pusarawati, Suhintam ^b   Nasronudin, ^b   Harijanto, Paul N ^d   Yamaoka, Yoshio ^e  

^a OITA UNIVERSITY   (Japan)

^b AIRLANGGA UNIVERSITY   (Indonesia)

^c SAM RATULANGI UNIVERSITY   (Indonesia)

^d Department of Internal Medicine Public Hospital of Bethesda Tomohon   (Indonesia)

^e BAYLOR COLLEGE OF MEDICINE   (United States)

Author keywords

Helicobacter pylori; Indonesia; Maori

Indexed keywords

EID: 84907984976     PISSN: None     EISSN: 17574749     Source Type: Journal    
DOI: 10.1186/s13099-014-0042-0     Document Type: Article

References (41)

1. Helicobacter pylori infection-a boon or a bane: lessons from studies in a low-prevalence population. YY Lee, S Mahendra Raj, DY Graham, Helicobacter 2013 18 338 346 10.1111/hel.12058 23607896
2. The Indonesian archipelago: an ancient genetic highway linking Asia and the Pacific. MK Tumonggor, TM Karafet, B Hallmark, JS Lansing, H Sudoyo, MF Hammer, MP Cox, J Hum Genet 2013 58 165 173 10.1038/jhg.2012.154 23344321
3. Helicobacter pylori infection. S Suerbaum, P Michetti, N Engl J Med 2002 347 1175 1186 10.1056/NEJMra020542 12374879
4. Role of Helicobacter pylori cagA EPIYA motif and vacA genotypes for the development of gastrointestinal diseases in Southeast Asian countries: a meta-analysis. S Sahara, M Sugimoto, RK Vilaichone, V Mahachai, H Miyajima, T Furuta, Y Yamaoka, BMC Infect Dis 2012 12 223 10.1186/1471-2334-12-223 22994150
5. Laboratory diagnosis and susceptibility profile of Helicobacter pylori infection in the Philippines. RV Destura, ED Labio, LJ Barrett, CS Alcantara, VI Gloria, ML Daez, RL Guerrant, Ann Clin Microbiol Antimicrob 2004 3 25 10.1186/1476-0711-3-25 15546485
6. Helicobacter pylori infection appears essential for stomach carcinogenesis: observations in Semarang, Indonesia. S Tokudome, WD Samsuria Soeripto, FX Triningsih, S Suzuki, A Hosono, T Triono, IW Sarjadi, IP Miranti, R Ghadimi, MA Moore, Cancer Sci 2005 96 873 875 10.1111/j.1349-7006.2005.00122.x 16367906
7. Rare Helicobacter pylori infection as a factor for the very low stomach cancer incidence in Yogyakarta, Indonesia. S Tokudome, Soeripto, FX Triningsih, I Ananta, S Suzuki, K Kuriki, S Akasaka, H Kosaka, H Ishikawa, T Azuma, MA Moore, Cancer Lett 2005 219 57 61 10.1016/j.canlet.2004.09.043 15770773
8. Association between HLA-DQ genotypes and haplotypes vs Helicobacter pylori infection in an Indonesian population. Y Zhao, J Wang, T Tanaka, A Hosono, R Ando, S Soeripto, FX Ediati Triningsih, T Triono, S Sumoharjo, EY Astuti, S Gunawan, S Tokudome, Asian Pac J Cancer Prev 2012 13 1247 1251 10.7314/APJCP.2012.13.4.1247 22799313
9. Accuracy of Helicobacter pylori stool antigen for the detection of Helicobacter pylori infection in dyspeptic patients. AF Syam, AA Rani, M Abdullah, C Manan, D Makmun, M Simadibrata, D Djojoningrat, T Sato, World J Gastroenterol 2005 11 386 388 15643676
10. Evaluation of the use of rapid urease test: pronto dry to detect H pylori in patients with dyspepsia in several cities in Indonesia. AF Syam, M Abdullah, AA Rani, S Nurdjanah, P Adi, A Djumhana, P Tarigan, ID Wibawa, World J Gastroenterol 2006 12 6216 6218 17036399
11. Incidence of helicobacter pylori infection and gastric cancer: an 8-year hospital based study. JB Saragih, N Akbar, AF Syam, S Sirait, S Himawan, E Soetjahyo, Acta Med Indones 2007 39 79 81 17485791
12. Pepsinogen I concentration in organic dyspepsia patients at Gastroenterology Division, Department of Internal Medicine, Cipto Mangunkusumo Hospital. D Aulia, GO Manz, M Simadibrata, Acta Med Indones 2009 41 107 114 19752481
13. Identification of Helicobacter pylori infection in symptomatic patients in Surabaya, Indonesia, using five diagnostic tests. M Miftahussurur, S Shiota, R Suzuki, M Matsuda, T Uchida, Y Kido, F Kawamoto, U Maimunah, P Adi, Y Rezkitha, Nasronudin, I Nusi, Y Yamaoka, Epidemiol Infect 2014 1 11 [Epub ahead of print] 10.1017/S095026881400154X
14. Traces of human migrations in Helicobacter pylori populations. D Falush, T Wirth, B Linz, JK Pritchard, M Stephens, M Kidd, MJ Blaser, DY Graham, S Vacher, GI Perez-Perez, Y Yamaoka, F Mégraud, K Otto, U Reichard, E Katzowitsch, X Wang, M Achtman, S Suerbaum, Science 2003 299 1582 1585 10.1126/science.1080857 12624269
15. An African origin for the intimate association between humans and Helicobacter pylori. B Linz, F Balloux, Y Moodley, A Manica, H Liu, P Roumagnac, D Falush, C Stamer, F Prugnolle, SW van der Merwe, Y Yamaoka, DY Graham, E Perez-Trallero, T Wadstrom, S Suerbaum, M Achtman, Nature 2007 445 915 918 10.1038/nature05562 17287725
16. Helicobacter pylori typing as a tool for tracking human migration. Y Yamaoka, Clin Microbiol Infect 2009 15 829 834 10.1111/j.1469-0691.2009.02967.x 19702588
17. Mechanisms of disease: Helicobacter pylori virulence factors. Y Yamaoka, Nat Rev Gastroenterol Hepatol 2010 7 629 641 20938460
18. Did the genus Parandrocephalus Heller, 1916 (Coleoptera, Cerambycidae, Callichromatini) cross the Wallace line? The taxonomic status of Parandrocephalus blairi Bentanachs & Vives 2009 and a new subgenus of Hexamitodera Heller, 1896, with notes on convergent evolution and secondary sexual characters. R Perger, Zookeys 2013 293 77 89 10.3897/zookeys.293.5133 23794868
19. A History of the Minahasa c. 1615-1680. JS Wigboldus, Archipel 1987 34 63 101 10.3406/arch.1987.2374
20. The peopling of the Pacific from a bacterial perspective. Y Moodley, B Linz, Y Yamaoka, HM Windsor, S Breurec, JY Wu, A Maady, S Bernhöft, JM Thiberge, S Phuanukoonnon, G Jobb, P Siba, DY Graham, BJ Marshall, M Achtman, Science 2009 323 527 530 10.1126/science.1166083 19164753
21. Analysis of Helicobacter pylori genotypes in Afghani and Iranian isolates. H Dabiri, M Bolfion, A Mirsalehian, M Rezadehbashi, F Jafari, L Shokrzadeh, N Sahebekhtiari, H Zojaji, Y Yamaoka, D Mirsattari, MR Zali, Pol J Microbiol 2010 59 61 66 20568532
22. Epidemiology of Helicobacter pylori infection and public health implications. KL Goh, WK Chan, S Shiota, Y Yamaoka, Helicobacter 2011 16 Suppl 1 1 9 10.1111/j.1523-5378.2011.00874.x 21896079
23. Diagnostic accuracy of urine-based kits for detection of Helicobacter pylori antibody in children. M Okuda, S Kamiya, M Booka, S Kikuchi, T Osaki, T Hiwatani, K Maekawa, Y Fukuda, Pediatr Int 2013 55 337 341 10.1111/ped.12057 23360308
24. Helicobacter pylori and gastric diseases. MJ Blaser, BMJ 1998 316 1507 1510 10.1136/bmj.316.7143.1507 9582144
25. Evidence from a nine-year birth cohort study in Japan of transmission pathways of Helicobacter pylori infection. HM Malaty, T Kumagai, E Tanaka, H Ota, K Kiyosawa, DY Graham, T Katsuyama, J Clin Microbiol 2000 38 1971 1973 10790131
26. Population genetic structure of peninsular Malaysia Malay sub-ethnic groups. WI Hatin, AR Nur-Shafawati, MK Zahri, S Xu, L Jin, SG Tan, M Rizman-Idid, BA Zilfalil, HP-AS Consortium, PLoS One 2011 6 18312 10.1371/journal.pone.0018312 21483678
27. Socioeconomic status, personal habits, and prevalence of Helicobacter pylori infection in the inhabitants of Lanyu. HL Chen, MJ Chen, SC Shih, HY Wang, IT Lin, MJ Bair, J Formos Med Assoc 2014 113 278 283 10.1016/j.jfma.2013.11.013 24389268
28. Diversity of the cagA gene of Helicobacter pylori strains from patients with gastroduodenal diseases in the Philippines. MC Cortes, A Yamakawa, CR Casingal, LS Fajardo, ML Juan, BB De Guzman, EM Bondoc, V Mahachai, Y Yamazaki, M Yoshida, H Kutsumi, FF Natividad, T Azuma, FEMS Immunol Med Microbiol 2010 60 90 97 10.1111/j.1574-695X.2010.00722.x 20670275
29. Practical rapid, minimally invasive, reliable nonendoscopic method to obtain Helicobacter pylori for culture. DY Graham, M Kudo, R Reddy, AR Opekun, Helicobacter 2005 10 1 3 10.1111/j.1523-5378.2005.00285.x 15691309
30. Rapid detection of anti-Helicobacter pylori IgG in urine using immunochromatography. DY Graham, S Reddy, Aliment Pharmacol Ther 2001 15 699 702 10.1046/j.1365-2036.2001.00968.x 11328264
31. Evaluation of rapid urine test for the detection of Helicobacter pylori infection in the Vietnamese population. LT Nguyen, T Uchida, Y Tsukamoto, TD Trinh, L Ta, DQ Ho, T Matsuhisa, M Uchida, A Takayama, N Hijiya, T Okimoto, M Kodama, K Murakami, T Fujioka, M Moriyama, Dig Dis Sci 2010 55 89 93 10.1007/s10620-009-0720-9 19241167
32. Transport and storage of Helicobacter pylori from gastric mucosal biopsies and clinical isolates. SW Han, R Flamm, CY Hachem, HY Kim, JE Clarridge, DG Evans, J Beyer, J Drnec, DY Graham, Eur J Clin Microbiol Infect Dis 1995 14 349 352 10.1007/BF02116531 7649201
33. Relationship of vacA genotypes of Helicobacter pylori to cagA status, cytotoxin production, and clinical outcome. Y Yamaoka, T Kodama, M Kita, J Imanishi, K Kashima, DY Graham, Helicobacter 1998 3 241 253 10.1046/j.1523-5378.1998.08056.x 9844065
34. Association between Helicobacter pylori virulence factors and gastroduodenal diseases in Okinawa, Japan. O Matsunari, S Shiota, R Suzuki, M Watada, N Kinjo, K Murakami, T Fujioka, F Kinjo, Y Yamaoka, J Clin Microbiol 2012 50 876 883 10.1128/JCM.05562-11 22189111
35. Intact long-type dupA as a marker for gastroduodenal diseases in Okinawan subpopulation, Japan. A Takahashi, S Shiota, O Matsunari, M Watada, R Suzuki, S Nakachi, N Kinjo, F Kinjo, Y Yamaoka, Helicobacter 2013 18 66 72 10.1111/j.1523-5378.2012.00994.x 23067336
36. Mosaicism in vacuolating cytotoxin alleles of Helicobacter pylori. Association of specific vacA types with cytotoxin production and peptic ulceration. JC Atherton, P Cao, RM Peek, MK Tummuru, MJ Blaser, TL Cover, J Biol Chem 1995 270 17771 17777 10.1074/jbc.270.30.17771 7629077
37. Relationship between Helicobacter pylori iceA, cagA, and vacA status and clinical outcome: studies in four different countries. Y Yamaoka, T Kodama, O Gutierrez, JG Kim, K Kashima, DY Graham, J Clin Microbiol 1999 37 2274 2279 10364597
38. Relationship between the cagA 3′ repeat region of Helicobacter pylori, gastric histology, and susceptibility to low pH. Y Yamaoka, HM El-Zimaity, O Gutierrez, N Figura, JG Kim, T Kodama, K Kashima, DY Graham, JK Kim, Gastroenterology 1999 117 342 349 10.1053/gast.1999.0029900342 10419915
39. Importance of Helicobacter pylori oipA in clinical presentation, gastric inflammation, and mucosal interleukin 8 production. Y Yamaoka, S Kikuchi, HM el-Zimaity, O Gutierrez, MS Osato, DY Graham, Gastroenterology 2002 123 414 424 10.1053/gast.2002.34781 12145793
40. MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. S Kumar, M Nei, J Dudley, K Tamura, Brief Bioinform 2008 9 299 306 10.1093/bib/bbn017 18417537
41. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. K Tamura, J Dudley, M Nei, S Kumar, Mol Biol Evol 2007 24 1596 1599 10.1093/molbev/msm092 17488738