Synergetic approach for simple and rapid conjugation of gold nanoparticles with oligonucleotides

ACS Applied Materials and Interfaces

Volumn 6, Issue 19, 2014, Pages 16800-16807

  Li, Jiuxing ^a   Zhu, Binqing ^a   Yao, Xiujie ^a   Zhang, Yicong ^a   Zhu, Zhi ^a   Tu, Song ^a   Jia, Shasha ^a   Liu, Rudi ^a   Kang, Huaizhi ^a   Yang, Chaoyong James ^a  

^a XIAMEN UNIVERSITY   (China)

Author keywords

bioconjugation; DNA conjugation; Gold nanoparticle; self assembly; surface modification; surfactants

Indexed keywords

BIOPOLYMERS; FIBER OPTIC SENSORS; GOLD; IONIC STRENGTH; METAL NANOPARTICLES; MOTION PICTURE EXPERTS GROUP STANDARDS; NANOPARTICLES; NANOSTRUCTURES; OLIGONUCLEOTIDES; SELF ASSEMBLY; SURFACE ACTIVE AGENTS; SURFACE TREATMENT;

BIO-CONJUGATION; CATALYTIC PROPERTIES; COMPLEMENTARY SEQUENCES; ELECTROSTATIC REPULSION; GOLD NANOPARTICLES; INORGANIC NANOMATERIALS; MOLECULAR RECOGNITION PROPERTIES; STABILIZATION EFFECTS;

DNA;

DNA; GOLD; MACROGOL DERIVATIVE; METAL NANOPARTICLE; MONOMETHOXYPOLYETHYLENE GLYCOL; OLIGONUCLEOTIDE; POLYSORBATE; SURFACTANT; THIOL DERIVATIVE;

CHEMISTRY; HELA CELL LINE; HUMAN; NANOTECHNOLOGY; PARTICLE SIZE; PROCEDURES; STANDARD; X RAY PHOTOELECTRON SPECTROSCOPY;

DNA; GOLD; HELA CELLS; HUMANS; METAL NANOPARTICLES; NANOTECHNOLOGY; OLIGONUCLEOTIDES; PARTICLE SIZE; PHOTOELECTRON SPECTROSCOPY; POLYETHYLENE GLYCOLS; POLYSORBATES; REFERENCE STANDARDS; SULFHYDRYL COMPOUNDS; SURFACE-ACTIVE AGENTS;

EID: 84907895712     PISSN: 19448244     EISSN: 19448252     Source Type: Journal    
DOI: 10.1021/am504139d     Document Type: Article

References (59)

1. Liu, X.; Atwater, M.; Wang, J.; Huo, Q. Extinction Coefficient of Gold Nanoparticles with Different Sizes and Different Capping Ligands Colloids Surf., B 2007, 58, 3-7
2. Ao, L.; Gao, F.; Pan, B.; He, R.; Cui, D. Fluoroimmunoassay for Antigen Based on Fluorescence Quenching Signal of Gold Nanoparticles Anal. Chem. 2006, 78, 1104-1106
3. Fan, C.; Wang, S.; Hong, J. W.; Bazan, G. C.; Plaxco, K. W.; Heeger, A. J. Beyond Superquenching: Hyper-Efficient Energy Transfer from Conjugated Polymers to Gold Nanoparticles Proc. Natl. Acad. Sci. U. S. A. 2003, 100, 6297-6301
4. Li, H.; Rothberg, L. J. DNA Sequence Detection Using Selective Fluorescence Quenching of Tagged Oligonucleotide Probes by Gold Nanoparticles Anal. Chem. 2004, 76, 5414-5417
5. Wang, H.; Wang, Y.; Jin, J.; Yang, R. Gold Nanoparticle-Based Colorimetric and "Turn-ona"Fluorescent Probe for Mercury(II) Ions in Aqueous Solution Anal. Chem. 2008, 80, 9021-9028
6. Boyen, H. G.; Kaestle, G.; Weigl, F.; Koslowski, B.; Dietrich, C.; Ziemann, P.; Spatz, J. P.; Riethmueller, S.; Hartmann, C.; Moeller, M.; Schmid, G.; Garnier, M. G.; Oelhafen, P. Oxidation-Resistant Gold-55 Clusters Science 2002, 297, 1533-1536
7. Qian, X.; Peng, X.-H.; Ansari, D. O.; Yin-Goen, Q.; Chen, G. Z.; Shin, D. M.; Yang, L.; Young, A. N.; Wang, M. D.; Nie, S. In Vivo Tumor Targeting and Spectroscopic Detection with Surface-Enhanced Raman Nanoparticle Tags Nat. Biotechnol. 2008, 26, 83-90
8. Corma, A.; Garcia, H. Supported Gold Nanoparticles as Catalysts for Organic Reactions Chem. Soc. Rev. 2008, 37, 2096-2126
9. Hill, H. D.; Macfarlane, R. J.; Senesi, A. J.; Lee, B.; Park, S. Y.; Mirkin, C. A. Controlling the Lattice Parameters of Gold Nanoparticle Fcc Crystals with Duplex DNA Linkers Nano Lett. 2008, 8, 2341-2344
10. Nykypanchuk, D.; Maye, M. M.; van der Lelie, D.; Gang, O. DNA-Guided Crystallization of Colloidal Nanoparticles Nature 2008, 451, 549-552
11. Park, S. Y.; Lytton-Jean, A. K. R.; Lee, B.; Weigand, S.; Schatz, G. C.; Mirkin, C. A. DNA-Programmable Nanoparticle Crystallization Nature 2008, 451, 553-556
12. Cui, L.; Ke, G.; Zhang, W. Y.; Yang, C. J. A Universal Platform for Sensitive and Selective Colorimetric DNA Detection Based on Exo III Assisted Signal Amplification Biosens. Bioelectron. 2011, 26, 2796-2800
13. Chen, Y.; Oa'Donoghue, M. B.; Huang, Y.-F.; Kang, H.; Phillips, J. A.; Chen, X.; Estevez, M.-C.; Yang, C. J.; Tan, W. A Surface Energy Transfer Nanoruler for Measuring Binding Site Distances on Live Cell Surfaces J. Am. Chem. Soc. 2010, 132, 16559-16570
14. Chen, J.; Fang, Z.; Lie, P.; Zeng, L. Computational Lateral Flow Biosensor for Proteins and Small Molecules: A New Class of Strip Logic Gates Anal. Chem. 2012, 84, 6321-6325
15. Zhao, W.; Ali, M. M.; Aguirre, S. D.; Brook, M. A.; Li, Y. Paper-Based Bioassays Using Gold Nanoparticle Colorimetric Probes Anal. Chem. 2008, 80, 8431-8437
16. Xu, W.; Xue, X.; Li, T.; Zeng, H.; Liu, X. Ultrasensitive and Selective Colorimetric DNA Detection by Nicking Endonuclease Assisted Nanoparticle Amplification Angew. Chem., Int. Ed. 2009, 48, 6849-6852
17. Storhoff, J. J.; Lucas, A. D.; Garimella, V.; Bao, Y. P.; Mueller, U. R. Homogeneous Detection of Unamplified Genomic DNA Sequences Based on Colorimetric Scatter of Gold Nanoparticle Probes Nat. Biotechnol. 2004, 22, 883-887
18. Pan, W.; Yang, H.; Zhang, T.; Li, Y.; Li, N.; Tang, B. Dual-Targeted Nanocarrier Based on Cell Surface Receptor and Intracellular MRNA: An Effective Strategy for Cancer Cell Imaging and Therapy Anal. Chem. 2013, 85, 6930-6935
19. Xiao, Z.; Ji, C.; Shi, J.; Pridgen, E. M.; Frieder, J.; Wu, J.; Farokhzad, O. C. DNA Self-Assembly of Targeted near-Infrared-Responsive Gold Nanoparticles for Cancer Thermo-Chemotherapy Angew. Chem., Int. Ed. 2012, 51, 11853-11857
20. Khlebtsov, B.; Zharov, V.; Melnikov, A.; Tuchin, V.; Khlebtsov, N. Optical Amplification of Photothermal Therapy with Gold Nanoparticles and Nanoclusters Nanotechnology 2006, 17, 5167-5179
21. Li, Y.; Wark, A. W.; Lee, H. J.; Corn, R. M. Single-Nucleotide Polymorphism Genotyping by Nanoparticle-Enhanced Surface Plasmon Resonance Imaging Measurements of Surface Ligation Reactions Anal. Chem. 2006, 78, 3158-3164
22. Li, N.; Chang, C.; Pan, W.; Tang, B. A Multicolor Nanoprobe for Detection and Imaging of Tumor-Related MRNAs in Living Cells Angew. Chem., Int. Ed. 2012, 51, 7426-7430
23. Kang, B.; Mackey, M. A.; El-Sayed, M. A. Nuclear Targeting of Gold Nanoparticles in Cancer Cells Induces DNA Damage, Causing Cytokinesis Arrest and Apoptosis J. Am. Chem. Soc. 2010, 132, 1517-1519
24. Jin, Y.; Li, H.; Bai, J. Homogeneous Selecting of a Quadruplex-Binding Ligand-Based Gold Nanoparticle Fluorescence Resonance Energy Transfer Assay Anal. Chem. 2009, 81, 5709-5715
25. Skewis, L. R.; Reinhard, B. M. Spermidine Modulated Ribonuclease Activity Probed by RNA Plasmon Rulers Nano Lett. 2008, 8, 214-220
26. Cao, Y. C.; Jin, R.; Mirkin, C. A. Nanoparticles with Raman Spectroscopic Fingerprints for DNA and RNA Detection Science 2002, 297, 1536-1540
27. Han, G.; You, C.-C.; Kim, B.-j.; Turingan, R. S.; Forbes, N. S.; Martin, C. T.; Rotello, V. M. Light-Regulated Release of DNA and Its Delivery to Nuclei by Means of Photolabile Gold Nanoparticles Angew. Chem., Int. Ed. 2006, 45, 3165-3169
28. Huschka, R.; Zuloaga, J.; Knight, M. W.; Brown, L. V.; Nordlander, P.; Halas, N. J. Light-Induced Release of DNA from Gold Nanoparticles: Nanoshells and Nanorods J. Am. Chem. Soc. 2011, 133, 12247-12255
29. Salem, A. K.; Searson, P. C.; Leong, K. W. Multifunctional Nanorods for Gene Delivery Nat. Mater. 2003, 2, 668-671
30. Rosi, N. L.; Giljohann, D. A.; Thaxton, C. S.; Lytton-Jean, A. K. R.; Han, M. S.; Mirkin, C. A. Oligonucleotide-Modified Gold Nanoparticles for Intracellular Gene Regulation Science 2006, 312, 1027-1030
31. Hurst, S. J.; Lytton-Jean, A. K. R.; Mirkin, C. A. Maximizing DNA Loading on a Range of Gold Nanoparticle Sizes Anal. Chem. 2006, 78, 8313-8318
32. Zhang, J.; Song, S.; Zhang, L.; Wang, L.; Wu, H.; Pan, D.; Fan, C. Sequence-Specific Detection of Femtomolar DNA Via a Chronocoulometric DNA Sensor (CDS): Effects of Nanoparticle-Mediated Amplification and Nanoscale Control of DNA Assembly at Electrodes J. Am. Chem. Soc. 2006, 128, 8575-8580
33. Liu, Y.-C.; Li, Y.-J.; Huang, C.-C. Information Derived from Cluster Ions from DNA-Modified Gold Nanoparticles under Laser Desorption/Ionization: Analysis of Coverage, Structure, and Single-Nucleotide Polymorphism Anal. Chem. 2013, 85, 1021-1028
34. Cao, Y. C.; Jin, R.; Nam, J.-M.; Thaxton, C. S.; Mirkin, C. A. Raman Dye-Labeled Nanoparticle Probes for Proteins J. Am. Chem. Soc. 2003, 125, 14676-14677
35. Jang, B.; Park, J.-Y.; Tung, C.-H.; Kim, I.-H.; Choi, Y. Gold Nanorod- Photosensitizer Complex for near-Infrared Fluorescence Imaging and Photodynamic/Photothermal Therapy in Vivo ACS Nano 2011, 5, 1086-1094
36. Wang, J.; You, M.; Zhu, G.; Shukoor, M. I.; Chen, Z.; Zhao, Z.; Altman, M. B.; Yuan, Q.; Zhu, Z.; Chen, Y. Photosensitizer-Gold Nanorod Composite for Targeted Multimodal Therapy Small 2013, 9, 3678-3684
37. Storhoff, J. J.; Elghanian, R.; Mucic, R. C.; Mirkin, C. A.; Letsinger, R. L. One-Pot Colorimetric Differentiation of Polynucleotides with Single Base Imperfections Using Gold Nanoparticle Probes J. Am. Chem. Soc. 1998, 120, 1959-1964
38. Hurst, S. J.; Lytton-Jean, A. K.; Mirkin, C. A. Maximizing DNA Loading on a Range of Gold Nanoparticle Sizes Anal. Chem. 2006, 78, 8313-8318
39. Park, S.; Brown, K. A.; Hamad-Schifferli, K. Changes in Oligonucleotide Conformation on Nanoparticle Surfaces by Modification with Mercaptohexanol Nano Lett. 2004, 4, 1925-1929
40. Zhao, W.; Chiuman, W.; Brook, M. A.; Li, Y. Simple and Rapid Colorimetric Biosensors Based on DNA Aptamer and Noncrosslinking Gold Nanoparticle Aggregation ChemBioChem 2007, 8, 727-731
41. Jin, R.; Wu, G.; Li, Z.; Mirkin, C. A.; Schatz, G. C. What Controls the Melting Properties of DNA-Linked Gold Nanoparticle Assemblies? J. Am. Chem. Soc. 2003, 125, 1643-1654
42. Liu, J.; Lu, Y. Accelerated Color Change of Gold Nanoparticles Assembled by DNAzymes for Simple and Fast Colorimetric Pb2+ Detection J. Am. Chem. Soc. 2004, 126, 12298-12305
43. Zu, Y.; Gao, Z. Facile and Controllable Loading of Single-Stranded DNA on Gold Nanoparticles Anal. Chem. 2009, 81, 8523-8528
44. Moody, C. A.; Field, J. A. Perfluorinated Surfactants and the Environmental Implications of Their Use in Fire-Fighting Foams Environ. Sci. Technol. 2000, 34, 3864-3870
45. Courrier, H. M.; Krafft, M. P.; Butz, N.; Porte, C.; Frossard, N.; Remy-Kristensen, A.; Mely, Y.; Pons, F.; Vandamme, T. F. Evaluation of Cytotoxicity of New Semi-Fluorinated Amphiphiles Derived from Dimorpholinophosphate Biomaterials 2002, 24, 689-696
46. Zhang, X.; Servos, M. R.; Liu, J. Instantaneous and Quantitative Functionalization of Gold Nanoparticles with Thiolated DNA Using a pH-Assisted and Surfactant-Free Route J. Am. Chem. Soc. 2012, 134, 7266-7269
47. Zhang, X.; Gouriye, T.; Göeken, K.; Servos, M. R.; Gill, R.; Liu, J. Toward Fast and Quantitative Modification of Large Gold Nanoparticles by Thiolated DNA: Scaling of Nanoscale Forces, Kinetics, and the Need for Thiol Reduction J. Phys. Chem. C 2013, 117, 15677-15684
48. Zhang, X.; Liu, B.; Dave, N.; Servos, M. R.; Liu, J. Instantaneous Attachment of an Ultrahigh Density of Nonthiolated DNA to Gold Nanoparticles and Its Applications Langmuir 2012, 28, 17053-17060
49. Zhang, X.; Servos, M. R.; Liu, J. Ultrahigh Nanoparticle Stability against Salt, pH, and Solvent with Retained Surface Accessibility via Depletion Stabilization J. Am. Chem. Soc. 2012, 134, 9910-9913
50. Frens, G. Controlled Nucleation for the Regulation of the Particle Size in Monodisperse Gold Suspensions Nature 1973, 241, 20-22
51. Song, S.; Liang, Z.; Zhang, J.; Wang, L.; Li, G.; Fan, C. Gold-Nanoparticle-Based Multicolor Nanobeacons for Sequence-Specific DNA Analysis Angew. Chem., Int. Ed. 2009, 48, 8670-8674
52. Demers, L. M.; Mirkin, C. A.; Mucic, R. C.; Reynolds, R. A.; Letsinger, R. L.; Elghanian, R.; Viswanadham, G. A Fluorescence-Based Method for Determining the Surface Coverage and Hybridization Efficiency of Thiol-Capped Oligonucleotides Bound to Gold Thin Films and Nanoparticles Anal. Chem. 2000, 72, 5535-5541
53. Turkevich, J. Colloidal Gold. Part II Gold Bull. 1985, 18, 125-131
54. Lang, N.; Liu, B.; Zhang, X.; Liu, J. Dissecting Colloidal Stabilization Factors in Crowded Polymer Solutions by Forming Self-Assembled Monolayers on Gold Nanoparticles Langmuir 2013, 29, 6018-6024
55. Wuelfing, W. P.; Gross, S. M.; Miles, D. T.; Murray, R. W. Nanometer Gold Clusters Protected by Surface-Bound Monolayers of Thiolated Poly(Ethylene Glycol) Polymer Electrolyte J. Am. Chem. Soc. 1998, 120, 12696-12697
56. Zhang, X.; Servos, M. R.; Liu, J. Ultrahigh Nanoparticle Stability against Salt, pH, and Solvent with Retained Surface Accessibility via Depletion Stabilization J. Am. Chem. Soc. 2012, 134, 9910-9913
57. Zheng, M.; Davidson, F.; Huang, X. Ethylene Glycol Monolayer Protected Nanoparticles for Eliminating Nonspecific Binding with Biological Molecules J. Am. Chem. Soc. 2003, 125, 7790-7791
58. Latham, A. H.; Williams, M. E. Versatile Routes toward Functional, Water-Soluble Nanoparticles via Trifluoroethylester-PEG-Thiol Ligands Langmuir 2006, 22, 4319-4326
59. Barr, T. L.; Seal, S. Nature of the Use of Adventitious Carbon as a Binding Energy Standard J. Vac. Sci. Technol. A 1995, 13, 1239-1246