-
1
-
-
84907285499
-
Bacteriophage of Bacillus larvae
-
Drobnikova V, Ludvik J. Bacteriophage of Bacillus larvae. J Apic Res 1982, 21:53-56.
-
(1982)
J Apic Res
, vol.21
, pp. 53-56
-
-
Drobnikova, V.1
Ludvik, J.2
-
3
-
-
0021703363
-
Morphology of a new bacteriophage isolated from Bacillus larvae
-
Benada O, Ludvik J, Drobnikova V. Morphology of a new bacteriophage isolated from Bacillus larvae. Folia Microbiol (Praha) 1984, 29:520-521.
-
(1984)
Folia Microbiol (Praha)
, vol.29
, pp. 520-521
-
-
Benada, O.1
Ludvik, J.2
Drobnikova, V.3
-
4
-
-
0021449772
-
Isolation of two bacteriophages from Bacillus larvae, PBL1 and PBL0.5, and partial characterization of PBL1
-
6726188
-
Dingman DW, Bakhiet N, Field CC, Stahly DP. Isolation of two bacteriophages from Bacillus larvae, PBL1 and PBL0.5, and partial characterization of PBL1. J Gen Virol 1984, 65:1101-1105. 10.1099/0022-1317-65-6-1101, 6726188.
-
(1984)
J Gen Virol
, vol.65
, pp. 1101-1105
-
-
Dingman, D.W.1
Bakhiet, N.2
Field, C.C.3
Stahly, D.P.4
-
5
-
-
45449122476
-
Properties of clear plaque mutants of the Bacillus larvae bacteriophages PBL0.5 AND PBL2
-
Bakhiet N, Stahly DP. Properties of clear plaque mutants of the Bacillus larvae bacteriophages PBL0.5 AND PBL2. J Invertebr Pathol 1988, 52:78-83.
-
(1988)
J Invertebr Pathol
, vol.52
, pp. 78-83
-
-
Bakhiet, N.1
Stahly, D.P.2
-
6
-
-
0026098412
-
Morphology of Bacillus larvae bacteriophage PBL3 and physical map of its DNA
-
Campana CF, Bakhiet N, Stahly DP. Morphology of Bacillus larvae bacteriophage PBL3 and physical map of its DNA. J Invertebr Pathol 1991, 57:141-143.
-
(1991)
J Invertebr Pathol
, vol.57
, pp. 141-143
-
-
Campana, C.F.1
Bakhiet, N.2
Stahly, D.P.3
-
7
-
-
0000078211
-
PPL1c, a virulent mutant bacteriophage useful for identification of Paenibacillus larvae subspecies larvae
-
10534418
-
Stahly DP, Alippi AM, Bakhiet N, Campana CF, Novak CC, Cox R. PPL1c, a virulent mutant bacteriophage useful for identification of Paenibacillus larvae subspecies larvae. J Invertebr Pathol 1999, 74:295-296. 10.1006/jipa.1999.4893, 10534418.
-
(1999)
J Invertebr Pathol
, vol.74
, pp. 295-296
-
-
Stahly, D.P.1
Alippi, A.M.2
Bakhiet, N.3
Campana, C.F.4
Novak, C.C.5
Cox, R.6
-
8
-
-
84907292682
-
The isolation of a bacteriophage (bacterial virus) from Bacillus larvae
-
Gochnauer T. The isolation of a bacteriophage (bacterial virus) from Bacillus larvae. Bee World 1955, 36:101-103.
-
(1955)
Bee World
, vol.36
, pp. 101-103
-
-
Gochnauer, T.1
-
9
-
-
84907280848
-
The use of bacteriophages in the analysis of the foulbrood diseases
-
Gochnauer T. The use of bacteriophages in the analysis of the foulbrood diseases. Proc 10th Intern Congr Entomol Congr Montreal 1956 1958, 4:1091-1096.
-
(1958)
Proc 10th Intern Congr Entomol Congr Montreal 1956
, vol.4
, pp. 1091-1096
-
-
Gochnauer, T.1
-
10
-
-
0014753050
-
Some properties of a bacteriophage from Bacillus larvae
-
5435792
-
Gochnauer TA. Some properties of a bacteriophage from Bacillus larvae. J Invertebr Pathol 1970, 15:149-156. 10.1016/0022-2011(70)90228-4, 5435792.
-
(1970)
J Invertebr Pathol
, vol.15
, pp. 149-156
-
-
Gochnauer, T.A.1
-
11
-
-
0030054190
-
Reclassification of Paenibacillus (formerly Bacillus) pulvifaciens (Nakamura 1984) Ash et al. 1994, a later subjective synonym of Paenibacillus (formerly Bacillus) larvae (White 1906) Ash et al. 1994, as a subspecies of P. larvae, with emended descriptions of P. larvae as P. larvae subsp. larvae and P. larvae subsp. pulvifaciens
-
8573507
-
Heyndrickx M, Vandemeulebroecke K, Hoste B, Janssen P, Kersters K, DeVos P, Logan NA, Ali N, Berkeley RCW. Reclassification of Paenibacillus (formerly Bacillus) pulvifaciens (Nakamura 1984) Ash et al. 1994, a later subjective synonym of Paenibacillus (formerly Bacillus) larvae (White 1906) Ash et al. 1994, as a subspecies of P. larvae, with emended descriptions of P. larvae as P. larvae subsp. larvae and P. larvae subsp. pulvifaciens. Int J Syst Bacteriol 1996, 46:270-279. 10.1099/00207713-46-1-270, 8573507.
-
(1996)
Int J Syst Bacteriol
, vol.46
, pp. 270-279
-
-
Heyndrickx, M.1
Vandemeulebroecke, K.2
Hoste, B.3
Janssen, P.4
Kersters, K.5
DeVos, P.6
Logan, N.A.7
Ali, N.8
Berkeley, R.C.W.9
-
12
-
-
33645210665
-
Reclassification of Paenibacillus larvae subsp. pulvifaciens and Paenibacillus larvae subsp. larvae as Paenibacillus larvae without subspecies differentiation
-
16514018
-
Genersch E, Forsgren E, Pentikainen J, Ashiralieva A, Rauch S, Kilwinski J, Fries I. Reclassification of Paenibacillus larvae subsp. pulvifaciens and Paenibacillus larvae subsp. larvae as Paenibacillus larvae without subspecies differentiation. Int J Syst Evol Microbiol 2006, 56:501-511. 10.1099/ijs.0.63928-0, 16514018.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 501-511
-
-
Genersch, E.1
Forsgren, E.2
Pentikainen, J.3
Ashiralieva, A.4
Rauch, S.5
Kilwinski, J.6
Fries, I.7
-
13
-
-
77249114108
-
Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size
-
2830324, 20064525
-
Hatfull GF, Jacobs-Sera D, Lawrence JG, Pope WH, Russell DA, Ko CC, Weber RJ, Patel MC, Germane KL, Edgar RH, Hatfull GF, Jacobs-Sera D, Lawrence JG, Pope WH, Russell DA, Ko CC, Weber RJ, Patel MC, Germane KL, Edgar RH, Hoyte NN, Bowman CA, Tantoco AT, Paladin EC, Myers MS, Smith AL, Grace MS, Pham TT, O'Brien MB, Vogelsberger AM, Hryckowian AJ, Wynalek JL, Donis-Keller H, Bogel MW, Peebles CL, Cresawn SG, Hendrix RW. Comparative genomic analysis of 60 Mycobacteriophage genomes: genome clustering, gene acquisition, and gene size. J Mol Biol 2010, 397:119-143. 10.1016/j.jmb.2010.01.011, 2830324, 20064525.
-
(2010)
J Mol Biol
, vol.397
, pp. 119-143
-
-
Hatfull, G.F.1
Jacobs-Sera, D.2
Lawrence, J.G.3
Pope, W.H.4
Russell, D.A.5
Ko, C.C.6
Weber, R.J.7
Patel, M.C.8
Germane, K.L.9
Edgar, R.H.10
Hatfull, G.F.11
Jacobs-Sera, D.12
Lawrence, J.G.13
Pope, W.H.14
Russell, D.A.15
Ko, C.C.16
Weber, R.J.17
Patel, M.C.18
Germane, K.L.19
Edgar, R.H.20
Hoyte, N.N.21
Bowman, C.A.22
Tantoco, A.T.23
Paladin, E.C.24
Myers, M.S.25
Smith, A.L.26
Grace, M.S.27
Pham, T.T.28
O'Brien, M.B.29
Vogelsberger, A.M.30
Hryckowian, A.J.31
Wynalek, J.L.32
Donis-Keller, H.33
Bogel, M.W.34
Peebles, C.L.35
Cresawn, S.G.36
Hendrix, R.W.37
more..
-
14
-
-
62449181292
-
Determining DNA packaging strategy by analysis of the termini of the chromosomes in tailed-bacteriophage virions
-
3082370, 19082553
-
Casjens SR, Gilcrease EB. Determining DNA packaging strategy by analysis of the termini of the chromosomes in tailed-bacteriophage virions. Methods Mol Biol 2009, 502:91-111. 10.1007/978-1-60327-565-1_7, 3082370, 19082553.
-
(2009)
Methods Mol Biol
, vol.502
, pp. 91-111
-
-
Casjens, S.R.1
Gilcrease, E.B.2
-
15
-
-
0036070576
-
Bacteriophage control of bacterial virulence
-
128183, 12117903
-
Wagner PL, Waldor MK. Bacteriophage control of bacterial virulence. Infect Immun 2002, 70:3985-3993. 10.1128/IAI.70.8.3985-3993.2002, 128183, 12117903.
-
(2002)
Infect Immun
, vol.70
, pp. 3985-3993
-
-
Wagner, P.L.1
Waldor, M.K.2
-
16
-
-
84858251258
-
Bacteriophage-encoded bacterial virulence factors and phage-pathogenicity island interactions
-
Boyd EF. Bacteriophage-encoded bacterial virulence factors and phage-pathogenicity island interactions. Adv Virus Res 2012, 82:91-118.
-
(2012)
Adv Virus Res
, vol.82
, pp. 91-118
-
-
Boyd, E.F.1
-
17
-
-
80053915293
-
Phamerator: a bioinformatic tool for comparative bacteriophage genomics
-
3233612, 21991981
-
Cresawn SG, Bogel M, Day N, Jacobs-Sera D, Hendrix RW, Hatfull GF. Phamerator: a bioinformatic tool for comparative bacteriophage genomics. BMC Bioinformatics 2011, 12:395. 10.1186/1471-2105-12-395, 3233612, 21991981.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 395
-
-
Cresawn, S.G.1
Bogel, M.2
Day, N.3
Jacobs-Sera, D.4
Hendrix, R.W.5
Hatfull, G.F.6
-
18
-
-
84875445608
-
CDD: conserved domains and protein three-dimensional structure
-
3531192, 23197659
-
Marchler-Bauer A, Zheng CJ, Chitsaz F, Derbyshire MK, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Lanczycki CJ, Lu F, Lu SN, Marchler GH, Song JS, Thanki N, Yamashita RA, Zhang DC, Bryant SH. CDD: conserved domains and protein three-dimensional structure. Nucleic Acids Res 2013, 41:D348-D352. 10.1093/nar/gks1243, 3531192, 23197659.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. D348-D352
-
-
Marchler-Bauer, A.1
Zheng, C.J.2
Chitsaz, F.3
Derbyshire, M.K.4
Geer, L.Y.5
Geer, R.C.6
Gonzales, N.R.7
Gwadz, M.8
Hurwitz, D.I.9
Lanczycki, C.J.10
Lu, F.11
Lu, S.N.12
Marchler, G.H.13
Song, J.S.14
Thanki, N.15
Yamashita, R.A.16
Zhang, D.C.17
Bryant, S.H.18
-
19
-
-
0025183708
-
Basic local alignment search tool
-
2231712
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol 1990, 215:403-410. 10.1016/S0022-2836(05)80360-2, 2231712.
-
(1990)
J Mol Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
20
-
-
80054078476
-
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
-
Sievers F, Wilm A, Dineen D, Gibson TJ, Karplus K, Li WZ, Lopez R, McWilliam H, Remmert M, Soding J, Thompson JD, Higgins DG. Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega. Mol Syst Biol 2011, 7:6.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 6
-
-
Sievers, F.1
Wilm, A.2
Dineen, D.3
Gibson, T.J.4
Karplus, K.5
Li, W.Z.6
Lopez, R.7
McWilliam, H.8
Remmert, M.9
Soding, J.10
Thompson, J.D.11
Higgins, D.G.12
-
21
-
-
84997796180
-
Complete genome sequence of the broad-host-range Paenibacillus larvae phage phiIBB_Pl23
-
e00438-00413. 3764407, 24009112
-
Oliveira A, Melo LDR, Kropinski AM, Azeredo J. Complete genome sequence of the broad-host-range Paenibacillus larvae phage phiIBB_Pl23. Genome Announc 2013, 1:e00438-00413. 3764407, 24009112.
-
(2013)
Genome Announc
, vol.1
-
-
Oliveira, A.1
Melo, L.D.R.2
Kropinski, A.M.3
Azeredo, J.4
-
22
-
-
84999808939
-
Complete genome sequences of five Paenibacillus larvae bacteriophages
-
e00668-00613. 3828306, 24233582
-
Sheflo MA, Gardner AV, Merrill BD, Fisher JNB, Lunt BL, Breakwell DP, Grose JH, Burnett SH. Complete genome sequences of five Paenibacillus larvae bacteriophages. Genome Announc 2013, 1:e00668-00613. 3828306, 24233582.
-
(2013)
Genome Announc
, vol.1
-
-
Sheflo, M.A.1
Gardner, A.V.2
Merrill, B.D.3
Fisher, J.N.B.4
Lunt, B.L.5
Breakwell, D.P.6
Grose, J.H.7
Burnett, S.H.8
-
23
-
-
0031955116
-
Consed: a graphical tool for sequence finishing
-
9521923
-
Gordon D, Abajian C, Green P. Consed: a graphical tool for sequence finishing. Genome Res 1998, 8:195-202. 10.1101/gr.8.3.195, 9521923.
-
(1998)
Genome Res
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
24
-
-
80053494963
-
The evolution of the tape measure protein: units, duplications and losses
-
Belcaid M, Bergeron A, Poisson G. The evolution of the tape measure protein: units, duplications and losses. BMC Bioinformatics 2011, 12(Suppl 9):S10.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. S10
-
-
Belcaid, M.1
Bergeron, A.2
Poisson, G.3
-
25
-
-
0043122995
-
FrameD: a flexible program for quality check and gene prediction in prokaryotic genomes and noisy matured eukaryotic sequences
-
169016, 12824407
-
Schiex T, Gouzy J, Moisan A, de Oliveira Y. FrameD: a flexible program for quality check and gene prediction in prokaryotic genomes and noisy matured eukaryotic sequences. Nucleic Acids Res 2003, 31:3738-3741. 10.1093/nar/gkg610, 169016, 12824407.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3738-3741
-
-
Schiex, T.1
Gouzy, J.2
Moisan, A.3
de Oliveira, Y.4
-
26
-
-
72249094991
-
Comparative genome analysis of Listeria bacteriophages reveals extensive mosaicism, programmed translational frameshifting, and a novel prophage insertion site
-
2786548, 19783628
-
Dorscht J, Klumpp J, Bielmann R, Schmelcher M, Born Y, Zimmer M, Calendar R, Loessner MJ. Comparative genome analysis of Listeria bacteriophages reveals extensive mosaicism, programmed translational frameshifting, and a novel prophage insertion site. J Bacteriol 2009, 191:7206-7215. 10.1128/JB.01041-09, 2786548, 19783628.
-
(2009)
J Bacteriol
, vol.191
, pp. 7206-7215
-
-
Dorscht, J.1
Klumpp, J.2
Bielmann, R.3
Schmelcher, M.4
Born, Y.5
Zimmer, M.6
Calendar, R.7
Loessner, M.J.8
-
27
-
-
0344863179
-
The complete nucleotide sequence and functional organization of Bacillus subtilis bacteriophage SPP1
-
9434185
-
Alonso JC, Lüder G, Stiege AC, Chai S, Weise F, Trautner TA. The complete nucleotide sequence and functional organization of Bacillus subtilis bacteriophage SPP1. Gene 1997, 204:201-212. 10.1016/S0378-1119(97)00547-7, 9434185.
-
(1997)
Gene
, vol.204
, pp. 201-212
-
-
Alonso, J.C.1
Lüder, G.2
Stiege, A.C.3
Chai, S.4
Weise, F.5
Trautner, T.A.6
-
28
-
-
0035795580
-
Phage conversion of Panton-Valentine leukocidin in Staphylococcus aureus: molecular analysis of a PVL-converting phage, ϕSLT
-
11368915
-
Narita S, Kaneko J, Chiba J-I, Piémont Y, Jarraud S, Etienne J, Kamio Y. Phage conversion of Panton-Valentine leukocidin in Staphylococcus aureus: molecular analysis of a PVL-converting phage, ϕSLT. Gene 2001, 268:195-206. 10.1016/S0378-1119(01)00390-0, 11368915.
-
(2001)
Gene
, vol.268
, pp. 195-206
-
-
Narita, S.1
Kaneko, J.2
Chiba, J.-I.3
Piémont, Y.4
Jarraud, S.5
Etienne, J.6
Kamio, Y.7
-
29
-
-
63449110899
-
The genome of Bacillus subtilis bacteriophage SPO1
-
2666789, 19285085
-
Stewart CR, Casjens SR, Cresawn SG, Houtz JM, Smith AL, Ford ME, Peebles CL, Hatfull GF, Hendrix RW, Huang WM, Pedulla ML. The genome of Bacillus subtilis bacteriophage SPO1. J Mol Biol 2009, 388:48-70. 10.1016/j.jmb.2009.03.009, 2666789, 19285085.
-
(2009)
J Mol Biol
, vol.388
, pp. 48-70
-
-
Stewart, C.R.1
Casjens, S.R.2
Cresawn, S.G.3
Houtz, J.M.4
Smith, A.L.5
Ford, M.E.6
Peebles, C.L.7
Hatfull, G.F.8
Hendrix, R.W.9
Huang, W.M.10
Pedulla, M.L.11
-
30
-
-
13544256293
-
Isolation and characterization of temperate bacteriophages of Clostridium difficile
-
546664, 15691969
-
Goh S, Riley TV, Chang BJ. Isolation and characterization of temperate bacteriophages of Clostridium difficile. Appl Environ Microbiol 2005, 71:1079-1083. 10.1128/AEM.71.2.1079-1083.2005, 546664, 15691969.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 1079-1083
-
-
Goh, S.1
Riley, T.V.2
Chang, B.J.3
-
31
-
-
53849135601
-
Molecular characterization of a Clostridium difficile bacteriophage and its cloned biologically active endolysin
-
2566179, 18708505
-
Mayer MJ, Narbad A, Gasson MJ. Molecular characterization of a Clostridium difficile bacteriophage and its cloned biologically active endolysin. J Bacteriol 2008, 190:6734-6740. 10.1128/JB.00686-08, 2566179, 18708505.
-
(2008)
J Bacteriol
, vol.190
, pp. 6734-6740
-
-
Mayer, M.J.1
Narbad, A.2
Gasson, M.J.3
-
32
-
-
33645226631
-
Genomic organization and molecular characterization of Clostridium difficile bacteriophage ΦCD119
-
1428422, 16547044
-
Govind R, Fralick JA, Rolfe RD. Genomic organization and molecular characterization of Clostridium difficile bacteriophage ΦCD119. J Bacteriol 2006, 188:2568-2577. 10.1128/JB.188.7.2568-2577.2006, 1428422, 16547044.
-
(2006)
J Bacteriol
, vol.188
, pp. 2568-2577
-
-
Govind, R.1
Fralick, J.A.2
Rolfe, R.D.3
-
33
-
-
0035174582
-
Comparative study of vaginal Lactobacillus phages isolated from women in the United States and Turkey: prevalence, morphology, host range, and DNA homology
-
96007, 11139192
-
Kilic AO, Pavlova SI, Alpay S, Kilic SS, Tao L. Comparative study of vaginal Lactobacillus phages isolated from women in the United States and Turkey: prevalence, morphology, host range, and DNA homology. Clin Diagn Lab Immunol 2001, 8:31-39. 96007, 11139192.
-
(2001)
Clin Diagn Lab Immunol
, vol.8
, pp. 31-39
-
-
Kilic, A.O.1
Pavlova, S.I.2
Alpay, S.3
Kilic, S.S.4
Tao, L.5
-
34
-
-
84880649795
-
Characterization of the genome of the dairy Lactobacillus helveticus bacteriophage ΦAQ113
-
3719528, 23728811
-
Zago M, Scaltriti E, Rossetti L, Guffanti A, Armiento A, Fornasari ME, Grolli S, Carminati D, Brini E, Pavan P, Felsani A, D'Urzo A, Moles A, Claude J-B, Grandori R, Ramoni R, Giraffa G. Characterization of the genome of the dairy Lactobacillus helveticus bacteriophage ΦAQ113. Appl Environ Microbiol 2013, 79:4712-4718. 10.1128/AEM.00620-13, 3719528, 23728811.
-
(2013)
Appl Environ Microbiol
, vol.79
, pp. 4712-4718
-
-
Zago, M.1
Scaltriti, E.2
Rossetti, L.3
Guffanti, A.4
Armiento, A.5
Fornasari, M.E.6
Grolli, S.7
Carminati, D.8
Brini, E.9
Pavan, P.10
Felsani, A.11
D'Urzo, A.12
Moles, A.13
Claude, J.-B.14
Grandori, R.15
Ramoni, R.16
Giraffa, G.17
-
35
-
-
0026799492
-
EJ-1, a temperate bacteriophage of Streptococcus pneumoniae with a Myoviridae morphotype
-
206494. 1355083
-
Diaz E, Lopez R, Garcia JL. EJ-1, a temperate bacteriophage of Streptococcus pneumoniae with a Myoviridae morphotype. J Bacteriol 1992, 174:5516-5525. 206494, 1355083.
-
(1992)
J Bacteriol
, vol.174
, pp. 5516-5525
-
-
Diaz, E.1
Lopez, R.2
Garcia, J.L.3
-
36
-
-
49149115195
-
Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools
-
18555669
-
Lavigne R, Seto D, Mahadevan P, Ackermann HW, Kropinski AM. Unifying classical and molecular taxonomic classification: analysis of the Podoviridae using BLASTP-based tools. Res Microbiol 2008, 159:406-414. 10.1016/j.resmic.2008.03.005, 18555669.
-
(2008)
Res Microbiol
, vol.159
, pp. 406-414
-
-
Lavigne, R.1
Seto, D.2
Mahadevan, P.3
Ackermann, H.W.4
Kropinski, A.M.5
-
37
-
-
70449380104
-
Classification of Myoviridae bacteriophages using protein sequence similarity
-
2771037, 19857251
-
Lavigne R, Darius P, Summer E, Seto D, Mahadevan P, Nilsson A, Ackermann H, Kropinski A. Classification of Myoviridae bacteriophages using protein sequence similarity. BMC Microbiol 2009, 9:224. 10.1186/1471-2180-9-224, 2771037, 19857251.
-
(2009)
BMC Microbiol
, vol.9
, pp. 224
-
-
Lavigne, R.1
Darius, P.2
Summer, E.3
Seto, D.4
Mahadevan, P.5
Nilsson, A.6
Ackermann, H.7
Kropinski, A.8
-
38
-
-
84879061415
-
Phage cluster relationships identified through single gene analysis
-
3610266, 23324121
-
Smith KC, Castro-Nallar E, Fisher JNB, Breakwell DP, Grose JH, Burnett SH. Phage cluster relationships identified through single gene analysis. BMC Genomics 2013, 14:15. 10.1186/1471-2164-14-15, 3610266, 23324121.
-
(2013)
BMC Genomics
, vol.14
, pp. 15
-
-
Smith, K.C.1
Castro-Nallar, E.2
Fisher, J.N.B.3
Breakwell, D.P.4
Grose, J.H.5
Burnett, S.H.6
-
39
-
-
0029189321
-
Genome homology and superinfection immunity between temperate and virulent Lactobacillus delbrueckii bacteriophages
-
8572946
-
Alatossava T, Forsman P, Ritzenthaler P. Genome homology and superinfection immunity between temperate and virulent Lactobacillus delbrueckii bacteriophages. Arch Virol 1995, 140:2261-2268. 10.1007/BF01323245, 8572946.
-
(1995)
Arch Virol
, vol.140
, pp. 2261-2268
-
-
Alatossava, T.1
Forsman, P.2
Ritzenthaler, P.3
-
40
-
-
0021783578
-
The temperate B. subtilis phage phi 105 genome contains at least two distinct regions encoding superinfection immunity
-
2995768
-
Dhaese P, Dobbelaere MR, Van Montagu M. The temperate B. subtilis phage phi 105 genome contains at least two distinct regions encoding superinfection immunity. Mol Gen Genet 1985, 200:490-492. 10.1007/BF00425736, 2995768.
-
(1985)
Mol Gen Genet
, vol.200
, pp. 490-492
-
-
Dhaese, P.1
Dobbelaere, M.R.2
Van Montagu, M.3
-
41
-
-
38949125046
-
Bacteriophages and food fermentations
-
Caister Academic Press, McGrath S, vanSinderen D, Wymondham UK
-
Emond E, Moineau S. Bacteriophages and food fermentations. Bacteriophage: Genetics and Molecular Biology 2007, 93-123. Caister Academic Press, McGrath S, vanSinderen D, Wymondham UK.
-
(2007)
Bacteriophage: Genetics and Molecular Biology
, pp. 93-123
-
-
Emond, E.1
Moineau, S.2
-
42
-
-
78049405714
-
A conserved acetyl esterase domain targets diverse bacteriophages to the Vi capsular receptor of Salmonella enterica serovar typhi
-
2953684, 20817773
-
Pickard D, Toribio AL, Petty NK, van Tonder A, Yu L, Goulding D, Barrell B, Rance R, Harris D, Wetter M, Wain J, Choudhary J, Thomson N, Dougan G. A conserved acetyl esterase domain targets diverse bacteriophages to the Vi capsular receptor of Salmonella enterica serovar typhi. J Bacteriol 2010, 192:5746-5754. 10.1128/JB.00659-10, 2953684, 20817773.
-
(2010)
J Bacteriol
, vol.192
, pp. 5746-5754
-
-
Pickard, D.1
Toribio, A.L.2
Petty, N.K.3
van Tonder, A.4
Yu, L.5
Goulding, D.6
Barrell, B.7
Rance, R.8
Harris, D.9
Wetter, M.10
Wain, J.11
Choudhary, J.12
Thomson, N.13
Dougan, G.14
-
43
-
-
77249110281
-
Secreted and immunogenic proteins produced by the honeybee bacterial pathogen, Paenibacillus larvae
-
19781868
-
Antunez K, Anido M, Evans JD, Zunino P. Secreted and immunogenic proteins produced by the honeybee bacterial pathogen, Paenibacillus larvae. Vet Microbiol 2010, 141:385-389. 10.1016/j.vetmic.2009.09.006, 19781868.
-
(2010)
Vet Microbiol
, vol.141
, pp. 385-389
-
-
Antunez, K.1
Anido, M.2
Evans, J.D.3
Zunino, P.4
-
44
-
-
36749083463
-
Ohno's dilemma: evolution of new genes under continuous selection
-
2040452, 17942681
-
Bergthorsson U, Andersson DI, Roth JR. Ohno's dilemma: evolution of new genes under continuous selection. Proc Natl Acad Sci U S A 2007, 104:17004-17009. 10.1073/pnas.0707158104, 2040452, 17942681.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 17004-17009
-
-
Bergthorsson, U.1
Andersson, D.I.2
Roth, J.R.3
-
45
-
-
77951246352
-
Revised road map to the phylum Firmicutes
-
New York: Springer-Verlag, De Vos P, Garrity G, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer KH, Whitman WB, 2
-
Ludwig W, Schleifer KH, Whitman WB. Revised road map to the phylum Firmicutes. Bergey's Manual of Systematic Bacteriology, Volume 3 2009, 1-13. New York: Springer-Verlag, De Vos P, Garrity G, Jones D, Krieg NR, Ludwig W, Rainey FA, Schleifer KH, Whitman WB, 2.
-
(2009)
Bergey's Manual of Systematic Bacteriology, Volume 3
, pp. 1-13
-
-
Ludwig, W.1
Schleifer, K.H.2
Whitman, W.B.3
-
46
-
-
0031584273
-
Head morphogenesis genes of the Bacillus subtilis bacteriophage SPP1
-
9180375
-
Becker B, delaFuente N, Gassel M, Gunther D, Tavares P, Lurz R, Trautner TA, Alonso JC. Head morphogenesis genes of the Bacillus subtilis bacteriophage SPP1. J Mol Biol 1997, 268:822-839. 10.1006/jmbi.1997.0997, 9180375.
-
(1997)
J Mol Biol
, vol.268
, pp. 822-839
-
-
Becker, B.1
delaFuente, N.2
Gassel, M.3
Gunther, D.4
Tavares, P.5
Lurz, R.6
Trautner, T.A.7
Alonso, J.C.8
-
47
-
-
84863710150
-
Phage morphology recapitulates phylogeny: the comparative genomics of a new group of myoviruses
-
3391216, 22792219
-
Comeau AM, Tremblay D, Moineau S, Rattei T, Kushkina AI, Tovkach FI, Krisch HM, Ackermann H-W. Phage morphology recapitulates phylogeny: the comparative genomics of a new group of myoviruses. PLoS One 2012, 7:e40102. 10.1371/journal.pone.0040102, 3391216, 22792219.
-
(2012)
PLoS One
, vol.7
, pp. e40102
-
-
Comeau, A.M.1
Tremblay, D.2
Moineau, S.3
Rattei, T.4
Kushkina, A.I.5
Tovkach, F.I.6
Krisch, H.M.7
Ackermann, H.-W.8
-
48
-
-
0002005167
-
Culture of Bacillus larvae from bulk honey samples for the detection of American foulbrood
-
Hornitzky MAZ, Clark S. Culture of Bacillus larvae from bulk honey samples for the detection of American foulbrood. J Apic Res 1991, 30:13-16.
-
(1991)
J Apic Res
, vol.30
, pp. 13-16
-
-
Hornitzky, M.A.Z.1
Clark, S.2
-
49
-
-
0035636682
-
An improved method for the detection and presumptive identification of Paenibacillus larvae subsp larvae spores in honey
-
Schuch DMT, Madden RH, Sattler A. An improved method for the detection and presumptive identification of Paenibacillus larvae subsp larvae spores in honey. J Apic Res 2001, 40:59-64.
-
(2001)
J Apic Res
, vol.40
, pp. 59-64
-
-
Schuch, D.M.T.1
Madden, R.H.2
Sattler, A.3
-
50
-
-
0037337201
-
Development and evaluation of PCR assays for the detection of Paenibacillus larvae in honey samples: comparison with isolation and biochemical characterization
-
150092, 12620836
-
Bakonyi T, Derakhshifar I, Grabensteiner E, Nowotny N. Development and evaluation of PCR assays for the detection of Paenibacillus larvae in honey samples: comparison with isolation and biochemical characterization. Appl Environ Microbiol 2003, 69:1504-1510. 10.1128/AEM.69.3.1504-1510.2003, 150092, 12620836.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1504-1510
-
-
Bakonyi, T.1
Derakhshifar, I.2
Grabensteiner, E.3
Nowotny, N.4
-
51
-
-
0019515852
-
Rapid method that aids in distinguishing Gram-positive from Gram-negative anaerobic bacteria
-
273811. 6165736
-
Halebian S, Harris B, Finegold SM, Rolfe RD. Rapid method that aids in distinguishing Gram-positive from Gram-negative anaerobic bacteria. J Clin Microbiol 1981, 13:444-448. 273811, 6165736.
-
(1981)
J Clin Microbiol
, vol.13
, pp. 444-448
-
-
Halebian, S.1
Harris, B.2
Finegold, S.M.3
Rolfe, R.D.4
-
52
-
-
0001857117
-
16S/23S rRNA sequencing
-
England: John Wiley & Sons, Ltd, Stackebrandt E, Goodfellow MC
-
Lane DJ, Stackebrandt E, Goodfellow MC. 16S/23S rRNA sequencing. Nucleic acid techniques in bacterial systematics 1991, 115-175. England: John Wiley & Sons, Ltd, Stackebrandt E, Goodfellow MC.
-
(1991)
Nucleic acid techniques in bacterial systematics
, pp. 115-175
-
-
Lane, D.J.1
Stackebrandt, E.2
Goodfellow, M.C.3
-
55
-
-
34249734822
-
Gepard: a rapid and sensitive tool for creating dotplots on genome scale
-
17309896
-
Krumsiek J, Arnold R, Rattei T. Gepard: a rapid and sensitive tool for creating dotplots on genome scale. Bioinformatics 2007, 23:1026-1028. 10.1093/bioinformatics/btm039, 17309896.
-
(2007)
Bioinformatics
, vol.23
, pp. 1026-1028
-
-
Krumsiek, J.1
Arnold, R.2
Rattei, T.3
-
56
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
17846036
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibson TJ, Higgins DG. Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23:2947-2948. 10.1093/bioinformatics/btm404, 17846036.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibson, T.J.12
Higgins, D.G.13
-
57
-
-
77953658770
-
Data mining pathogen genomes using GeneOrder and CoreGenes and CGUG: gene order, synteny and in silico proteomes
-
20054988
-
Mahadevan P, King JF, Seto D. Data mining pathogen genomes using GeneOrder and CoreGenes and CGUG: gene order, synteny and in silico proteomes. Int J Comput Biol Drug Des 2009, 2:100-114. 10.1504/IJCBDD.2009.027586, 20054988.
-
(2009)
Int J Comput Biol Drug Des
, vol.2
, pp. 100-114
-
-
Mahadevan, P.1
King, J.F.2
Seto, D.3
-
58
-
-
84875845952
-
CoreGenes3.5: a webserver for the determination of core genes from sets of viral and small bacterial genomes
-
3556315, 23281703
-
Turner D, Reynolds D, Seto D, Mahadevan P. CoreGenes3.5: a webserver for the determination of core genes from sets of viral and small bacterial genomes. BMC Res Notes 2013, 6:1-4. 10.1186/1756-0500-6-1, 3556315, 23281703.
-
(2013)
BMC Res Notes
, vol.6
, pp. 1-4
-
-
Turner, D.1
Reynolds, D.2
Seto, D.3
Mahadevan, P.4
-
59
-
-
3242887157
-
CD-Search: protein domain annotations on the fly
-
441592, 15215404
-
Marchler-Bauer A, Bryant SH. CD-Search: protein domain annotations on the fly. Nucleic Acids Res 2004, 32:W327-W331. 10.1093/nar/gkh454, 441592, 15215404.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. W327-W331
-
-
Marchler-Bauer, A.1
Bryant, S.H.2
|