-
1
-
-
84870724620
-
Microbial virus genome annotation-Mustering the troops to fight the sequence onslaught
-
Rodney Brister J, Le Mercier P, Hu JC (2012) Microbial virus genome annotation-Mustering the troops to fight the sequence onslaught. Virology. doi:10.1016/j.virol.2012.09.027.
-
(2012)
Virology
-
-
Rodney Brister, J.1
Le Mercier, P.2
Hu, J.C.3
-
2
-
-
75849158230
-
-
The Gene Ontology in 2010: extensions and refinements (2010). Nucleic Acids Res 38: D331-335. doi:10.1093/nar/gkp1018.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. D331-335
-
-
-
3
-
-
71149108706
-
Hepatitis B virus X protein molecular functions and its role in virus life cycle and pathogenesis
-
Benhenda S, Cougot D, Buendia M-A, Neuveut C (2009) Hepatitis B virus X protein molecular functions and its role in virus life cycle and pathogenesis. Adv Cancer Res 103: 75-109. doi:10.1016/S0065-230X(09)03004-8.
-
(2009)
Adv Cancer Res
, vol.103
, pp. 75-109
-
-
Benhenda, S.1
Cougot, D.2
Buendia, M.-A.3
Neuveut, C.4
-
4
-
-
58149200940
-
Human immunodeficiency virus type 1, human protein interaction database at NCBI
-
Fu W, Sanders-Beer BE, Katz KS, Maglott DR, Pruitt KD, et al. (2009) Human immunodeficiency virus type 1, human protein interaction database at NCBI. Nucleic Acids Res 37: D417-422. doi:10.1093/nar/gkn708.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. D417-422
-
-
Fu, W.1
Sanders-Beer, B.E.2
Katz, K.S.3
Maglott, D.R.4
Pruitt, K.D.5
-
5
-
-
84898675328
-
Identification of an ancient endogenous retrovirus, predating the divergence of the placental mammals
-
Lee A, Nolan A, Watson J, Tristem M (2013) Identification of an ancient endogenous retrovirus, predating the divergence of the placental mammals. Philos Trans R Soc Lond B Biol Sci 368: 20120503. doi:10.1098/rstb. 2012.0503.
-
(2013)
Philos Trans R Soc Lond B Biol Sci
, vol.368
, pp. 20120503
-
-
Lee, A.1
Nolan, A.2
Watson, J.3
Tristem, M.4
-
6
-
-
77955415407
-
Activation of host pattern recognition receptors by viruses
-
Brennan K, Bowie AG (2010) Activation of host pattern recognition receptors by viruses. Curr Opin Microbiol 13: 503-507. doi:10.1016/j.mib.2010.05.007.
-
(2010)
Curr Opin Microbiol
, vol.13
, pp. 503-507
-
-
Brennan, K.1
Bowie, A.G.2
-
7
-
-
79959634861
-
Pattern recognition receptors and the innate immune response to viral infection
-
Thompson MR, Kaminski JJ, Kurt-Jones EA, Fitzgerald KA (2011) Pattern recognition receptors and the innate immune response to viral infection. Viruses 3: 920-940. doi:10.3390/v3060920.
-
(2011)
Viruses
, vol.3
, pp. 920-940
-
-
Thompson, M.R.1
Kaminski, J.J.2
Kurt-Jones, E.A.3
Fitzgerald, K.A.4
-
8
-
-
84876698263
-
Intracellular pathogen detection by RIG-I-like receptors
-
Dixit E, Kagan JC (2013) Intracellular pathogen detection by RIG-I-like receptors. Adv Immunol 117: 99-125. doi:10.1016/B978-0-12-410524-9.00004-9.
-
(2013)
Adv Immunol
, vol.117
, pp. 99-125
-
-
Dixit, E.1
Kagan, J.C.2
-
9
-
-
65549164536
-
Influenza A virus NS1 targets the ubiquitin ligase TRIM25 to evade recognition by the host viral RNA sensor RIG-I
-
Gack MU, Albrecht RA, Urano T, Inn K-S, Huang I-C, et al. (2009) Influenza A virus NS1 targets the ubiquitin ligase TRIM25 to evade recognition by the host viral RNA sensor RIG-I. Cell Host Microbe 5: 439-449. doi:10.1016/j.chom.2009.04.006.
-
(2009)
Cell Host Microbe
, vol.5
, pp. 439-449
-
-
Gack, M.U.1
Albrecht, R.A.2
Urano, T.3
Inn, K.-S.4
Huang, I.-C.5
-
10
-
-
34249855382
-
Disruption of innate immunity due to mitochondrial targeting of a picornaviral protease precursor
-
Yang Y, Liang Y, Qu L, Chen Z, Yi M, et al. (2007) Disruption of innate immunity due to mitochondrial targeting of a picornaviral protease precursor. Proc Natl Acad Sci USA 104: 7253-7258. doi:10.1073/pnas.0611506104.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 7253-7258
-
-
Yang, Y.1
Liang, Y.2
Qu, L.3
Chen, Z.4
Yi, M.5
-
11
-
-
77955496554
-
The hepatitis B virus X protein disrupts innate immunity by downregulating mitochondrial antiviral signaling protein
-
Wei C, Ni C, Song T, Liu Y, Yang X, et al. (2010) The hepatitis B virus X protein disrupts innate immunity by downregulating mitochondrial antiviral signaling protein. J Immunol Baltim Md 1950 185: 1158-1168. doi:10.4049/jimmunol.0903874.
-
(2010)
J Immunol Baltim Md
, vol.1950
, Issue.185
, pp. 1158-1168
-
-
Wei, C.1
Ni, C.2
Song, T.3
Liu, Y.4
Yang, X.5
-
12
-
-
29144462494
-
Hepatitis C virus protease NS3/4A cleaves mitochondrial antiviral signaling protein off the mitochondria to evade innate immunity
-
Li X-D, Sun L, Seth RB, Pineda G, Chen ZJ (2005) Hepatitis C virus protease NS3/4A cleaves mitochondrial antiviral signaling protein off the mitochondria to evade innate immunity. Proc Natl Acad Sci USA 102: 17717-17722. doi:10.1073/pnas.0508531102.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 17717-17722
-
-
Li, X.-D.1
Sun, L.2
Seth, R.B.3
Pineda, G.4
Chen, Z.J.5
-
13
-
-
0034767753
-
Antiviral actions of interferons
-
Samuel CE (2001) Antiviral actions of interferons. Clin Microbiol Rev 14: 778-809, table of contents. doi:10.1128/CMR.14.4.778-809.2001.
-
(2001)
Clin Microbiol Rev
, vol.14
, pp. 778-809
-
-
Samuel, C.E.1
-
14
-
-
0034977353
-
Functional classification of interferon-stimulated genes identified using microarrays
-
De Veer MJ, Holko M, Frevel M, Walker E, Der S, et al. (2001) Functional classification of interferon-stimulated genes identified using microarrays. J Leukoc Biol 69: 912-920.
-
(2001)
J Leukoc Biol
, vol.69
, pp. 912-920
-
-
De Veer, M.J.1
Holko, M.2
Frevel, M.3
Walker Der E, S.4
-
15
-
-
0034948808
-
The virus battles: IFN induction of the antiviral state and mechanisms of viral evasion
-
Levy DE, Garćia-Sastre A (2001) The virus battles: IFN induction of the antiviral state and mechanisms of viral evasion. Cytokine Growth Factor Rev 12: 143-156.
-
(2001)
Cytokine Growth Factor Rev
, vol.12
, pp. 143-156
-
-
Levy, D.E.1
Garćia-Sastre, A.2
-
18
-
-
2642511413
-
The viral infectivity factor (Vif) of HIV-1 unveiled
-
Rose KM, Marin M, Kozak SL, Kabat D (2004) The viral infectivity factor (Vif) of HIV-1 unveiled. Trends Mol Med 10: 291-297. doi:10.1016/j.molmed. 2004.04.008.
-
(2004)
Trends Mol Med
, vol.10
, pp. 291-297
-
-
Rose, K.M.1
Marin, M.2
Kozak, S.L.3
Kabat, D.4
-
19
-
-
33746827706
-
PML contributes to a cellular mechanism of repression of herpes simplex virus type 1 infection that is inactivated by ICP0
-
Everett RD, Rechter S, Papior P, Tavalai N, Stamminger T, et al. (2006) PML contributes to a cellular mechanism of repression of herpes simplex virus type 1 infection that is inactivated by ICP0. J Virol 80: 7995-8005. doi:10.1128/JVI. 00734-06.
-
(2006)
J Virol
, vol.80
, pp. 7995-8005
-
-
Everett, R.D.1
Rechter, S.2
Papior, P.3
Tavalai, N.4
Stamminger, T.5
-
20
-
-
79951670705
-
Viral evasion of T cell immunity: Ancient mechanisms offering new applications
-
Horst D, Verweij MC, Davison AJ, Ressing ME, Wiertz EJHJ (2011) Viral evasion of T cell immunity: ancient mechanisms offering new applications. Curr Opin Immunol 23: 96-103. doi:10.1016/j.coi.2010.11.005.
-
(2011)
Curr Opin Immunol
, vol.23
, pp. 96-103
-
-
Horst, D.1
Verweij, M.C.2
Davison, A.J.3
Ressing, M.E.4
Ejhj, W.5
-
21
-
-
0031950268
-
Inhibition of major histocompatibility complex class i antigen presentation in pig and primate cells by herpes simplex virus type 1 and 2 ICP47
-
Jugovic P, Hill AM, Tomazin R, Ploegh H, Johnson DC (1998) Inhibition of major histocompatibility complex class I antigen presentation in pig and primate cells by herpes simplex virus type 1 and 2 ICP47. J Virol 72: 5076-5084.
-
(1998)
J Virol
, vol.72
, pp. 5076-5084
-
-
Jugovic, P.1
Hill, A.M.2
Tomazin, R.3
Ploegh, H.4
Johnson, D.C.5
-
22
-
-
80052202803
-
Contribution of cytokines to pathology and protection in virus infection
-
Wack A, Openshaw P, O'Garra A (2011) Contribution of cytokines to pathology and protection in virus infection. Curr Opin Virol 1: 184-195. doi:10.1016/j.coviro.2011.05.015.
-
(2011)
Curr Opin Virol
, vol.1
, pp. 184-195
-
-
Wack, A.1
Openshaw, P.2
O'Garra, A.3
-
23
-
-
0036659118
-
Viral chemokine-binding proteins
-
Seet BT, McFadden G (2002) Viral chemokine-binding proteins. J Leukoc Biol 72: 24-34.
-
(2002)
J Leukoc Biol
, vol.72
, pp. 24-34
-
-
Seet, B.T.1
McFadden, G.2
-
24
-
-
0033578433
-
Cytomegalovirus encodes a potent alpha chemokine
-
Penfold ME, Dairaghi DJ, Duke GM, Saederup N, Mocarski ES, et al. (1999) Cytomegalovirus encodes a potent alpha chemokine. Proc Natl Acad Sci USA 96: 9839-9844.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 9839-9844
-
-
Penfold, M.E.1
Dairaghi, D.J.2
Duke, G.M.3
Saederup, N.4
Mocarski, E.S.5
-
25
-
-
77649215463
-
RNA silencing: An antiviral mechanism
-
Csorba T, Pantaleo V, Burgyán J (2009) RNA silencing: an antiviral mechanism. Adv Virus Res 75: 35-71. doi:10.1016/S0065-3527(09)07502-2.
-
(2009)
Adv Virus Res
, vol.75
, pp. 35-71
-
-
Csorba, T.1
Pantaleo, V.2
Burgyán, J.3
-
26
-
-
84857788515
-
The Enamovirus P0 protein is a silencing suppressor which inhibits local and systemic RNA silencing through AGO1 degradation
-
Fusaro AF, Correa RL, Nakasugi K, Jackson C, Kawchuk L, et al. (2012) The Enamovirus P0 protein is a silencing suppressor which inhibits local and systemic RNA silencing through AGO1 degradation. Virology 426: 178-187. doi:10.1016/j.virol.2012.01.026.
-
(2012)
Virology
, vol.426
, pp. 178-187
-
-
Fusaro, A.F.1
Correa, R.L.2
Nakasugi, K.3
Jackson, C.4
Kawchuk, L.5
-
27
-
-
84863229668
-
Suppression of Arabidopsis ARGONAUTE1-mediated slicing, transgene-induced RNA silencing, and DNA methylation by distinct domains of the Cucumber mosaic virus 2b protein
-
Duan C-G, Fang Y-Y, Zhou B-J, Zhao J-H, Hou W-N, et al. (2012) Suppression of Arabidopsis ARGONAUTE1-mediated slicing, transgene-induced RNA silencing, and DNA methylation by distinct domains of the Cucumber mosaic virus 2b protein. Plant Cell 24: 259-274. doi:10.1105/tpc.111.092718.
-
(2012)
Plant Cell
, vol.24
, pp. 259-274
-
-
Duan, C.-G.1
Fang, Y.-Y.2
Zhou, B.-J.3
Zhao, J.-H.4
Hou, W.-N.5
-
28
-
-
67649371098
-
Suppression of RNA silencing by Flock house virus B2 protein is mediated through its interaction with the PAZ domain of Dicer
-
Singh G, Popli S, Hari Y, Malhotra P, Mukherjee S, et al. (2009) Suppression of RNA silencing by Flock house virus B2 protein is mediated through its interaction with the PAZ domain of Dicer. FASEB J Off Publ Fed Am Soc Exp Biol 23: 1845-1857. doi:10.1096/fj.08-125120.
-
(2009)
FASEB J off Publ Fed Am Soc Exp Biol
, vol.23
, pp. 1845-1857
-
-
Singh, G.1
Popli, S.2
Hari, Y.3
Malhotra, P.4
Mukherjee, S.5
-
29
-
-
0032502748
-
Virus-induced host gene shutoff in animals and plants
-
Aranda M, Maule A (1998) Virus-induced host gene shutoff in animals and plants. Virology 243: 261-267. doi:10.1006/viro.1998.9032.
-
(1998)
Virology
, vol.243
, pp. 261-267
-
-
Aranda, M.1
Maule, A.2
-
30
-
-
0030999870
-
The adenovirus E1A repression domain disrupts the interaction between the TATA binding protein and the TATA box in a manner reversible by TFIIB
-
Song CZ, Loewenstein PM, Toth K, Tang Q, Nishikawa A, et al. (1997) The adenovirus E1A repression domain disrupts the interaction between the TATA binding protein and the TATA box in a manner reversible by TFIIB. Mol Cell Biol 17: 2186-2193.
-
(1997)
Mol Cell Biol
, vol.17
, pp. 2186-2193
-
-
Song, C.Z.1
Loewenstein, P.M.2
Toth, K.3
Tang, Q.4
Nishikawa, A.5
-
31
-
-
55549139493
-
The interferon antagonist ML protein of thogoto virus targets general transcription factor IIB
-
Vogt C, Preuss E, Mayer D, Weber F, Schwemmle M, et al. (2008) The interferon antagonist ML protein of thogoto virus targets general transcription factor IIB. J Virol 82: 11446-11453. doi:10.1128/JVI.01284-08.
-
(2008)
J Virol
, vol.82
, pp. 11446-11453
-
-
Vogt, C.1
Preuss, E.2
Mayer, D.3
Weber, F.4
Schwemmle, M.5
-
32
-
-
84864122222
-
Evasion of the innate immune response: The Old World alphavirus nsP2 protein induces rapid degradation of Rpb1, a catalytic subunit of RNA polymerase II
-
Akhrymuk I, Kulemzin SV, Frolova EI (2012) Evasion of the innate immune response: the Old World alphavirus nsP2 protein induces rapid degradation of Rpb1, a catalytic subunit of RNA polymerase II. J Virol 86: 7180-7191. doi:10.1128/JVI.00541-12.
-
(2012)
J Virol
, vol.86
, pp. 7180-7191
-
-
Akhrymuk, I.1
Kulemzin, S.V.2
Frolova, E.I.3
-
33
-
-
72149114640
-
Structural and functional diversity of viral IRESes
-
Balvay L, Soto Rifo R, Ricci EP, Decimo D, Ohlmann T (2009) Structural and functional diversity of viral IRESes. Biochim Biophys Acta 1789: 542-557. doi:10.1016/j.bbagrm.2009.07.005.
-
(2009)
Biochim Biophys Acta
, vol.1789
, pp. 542-557
-
-
Balvay, L.1
Soto Rifo, R.2
Ricci, E.P.3
Decimo, D.4
Ohlmann, T.5
-
34
-
-
47749151829
-
Cleavage of eukaryotic initiation factor eIF5B by enterovirus 3C proteases
-
De Breyne S, Bonderoff JM, Chumakov KM, Lloyd RE, Hellen CUT (2008) Cleavage of eukaryotic initiation factor eIF5B by enterovirus 3C proteases. Virology 378: 118-122. doi:10.1016/j.virol.2008.05.019.
-
(2008)
Virology
, vol.378
, pp. 118-122
-
-
De Breyne, S.1
Bonderoff, J.M.2
Chumakov, K.M.3
Lloyd, R.E.4
Cut, H.5
-
35
-
-
71049190550
-
HIV-1 protease inhibits Cap-and poly(A)-dependent translation upon eIF4GI and PABP cleavage
-
Castelló A, Franco D, Moral-López P, Berlanga JJ, Alvarez E, et al. (2009) HIV-1 protease inhibits Cap-and poly(A)-dependent translation upon eIF4GI and PABP cleavage. PloS One 4: e7997. doi:10.1371/journal.pone.0007997.
-
(2009)
PloS One
, vol.4
, pp. e7997
-
-
Castelló, A.1
Franco, D.2
Moral-López, P.3
Berlanga, J.J.4
Alvarez, E.5
-
36
-
-
84868132560
-
Determining host metabolic limitations on viral replication via integrated modeling and experimental perturbation
-
Birch EW, Ruggero NA, Covert MW (2012) Determining host metabolic limitations on viral replication via integrated modeling and experimental perturbation. PLoS Comput Biol 8: e1002746. doi:10.1371/journal.pcbi. 1002746.
-
(2012)
PLoS Comput Biol
, vol.8
, pp. e1002746
-
-
Birch, E.W.1
Ruggero, N.A.2
Covert, M.W.3
-
37
-
-
0030477260
-
Epstein-Barr virus nuclear antigen (EBNA)3C is an immortalizing oncoprotein with similar properties to adenovirus E1A and papillomavirus E7
-
Parker GA, Crook T, Bain M, Sara EA, Farrell PJ, et al. (1996) Epstein-Barr virus nuclear antigen (EBNA)3C is an immortalizing oncoprotein with similar properties to adenovirus E1A and papillomavirus E7. Oncogene 13: 2541-2549.
-
(1996)
Oncogene
, vol.13
, pp. 2541-2549
-
-
Parker, G.A.1
Crook, T.2
Bain, M.3
Sara, E.A.4
Farrell, P.J.5
-
38
-
-
44049107548
-
Phosphorylation of retinoblastoma protein by viral protein with cyclin-dependent kinase function
-
Hume AJ, Finkel JS, Kamil JP, Coen DM, Culbertson MR, et al. (2008) Phosphorylation of retinoblastoma protein by viral protein with cyclin-dependent kinase function. Science 320: 797-799. doi:10.1126/science. 1152095.
-
(2008)
Science
, vol.320
, pp. 797-799
-
-
Hume, A.J.1
Finkel, J.S.2
Kamil, J.P.3
Coen, D.M.4
Culbertson, M.R.5
-
39
-
-
0036203739
-
Interactions of SV40 large T antigen and other viral proteins with retinoblastoma tumour suppressor
-
Lee C, Cho Y (2002) Interactions of SV40 large T antigen and other viral proteins with retinoblastoma tumour suppressor. Rev Med Virol 12: 81-92.
-
(2002)
Rev Med Virol
, vol.12
, pp. 81-92
-
-
Lee, C.1
Cho, Y.2
-
40
-
-
23244452458
-
Myxoma virus M-T5 protects infected cells from the stress of cell cycle arrest through its interaction with host cell cullin-1
-
Johnston JB, Wang G, Barrett JW, Nazarian SH, Colwill K, et al. (2005) Myxoma virus M-T5 protects infected cells from the stress of cell cycle arrest through its interaction with host cell cullin-1. J Virol 79: 10750-10763. doi:10.1128/JVI.79.16.10750-10763.2005.
-
(2005)
J Virol
, vol.79
, pp. 10750-10763
-
-
Johnston, J.B.1
Wang, G.2
Barrett, J.W.3
Nazarian, S.H.4
Colwill, K.5
-
41
-
-
67651232707
-
The conserved UL24 family of human alpha, beta and gamma herpesviruses induces cell cycle arrest and inactivation of the cyclinB/cdc2 complex
-
Nascimento R, Dias JD, Parkhouse RME (2009) The conserved UL24 family of human alpha, beta and gamma herpesviruses induces cell cycle arrest and inactivation of the cyclinB/cdc2 complex. Arch Virol 154: 1143-1149. doi:10.1007/s00705-009-0420-y.
-
(2009)
Arch Virol
, vol.154
, pp. 1143-1149
-
-
Nascimento, R.1
Dias, J.D.2
Rme, P.3
-
42
-
-
84880919517
-
Autophagy and viruses: Adversaries or allies?
-
Dong X, Levine B (2013) Autophagy and viruses: adversaries or allies? J Innate Immun 5: 480-493. doi:10.1159/000346388.
-
(2013)
J Innate Immun
, vol.5
, pp. 480-493
-
-
Dong, X.1
Levine, B.2
-
43
-
-
84891742092
-
Autophagy as an innate immune modulator
-
Oh JE, Lee HK (2013) Autophagy as an innate immune modulator. Immune Netw 13: 1-9. doi:10.4110/in.2013.13.1.1.
-
(2013)
Immune Netw
, vol.13
, pp. 1-9
-
-
Oh, J.E.1
Lee, H.K.2
-
44
-
-
84868381258
-
Herpes simplex virus c34.5 interferes with autophagosome maturation and antigen presentation in dendritic cells
-
Gobeil PAM, Leib DA (2012) Herpes simplex virus c34.5 interferes with autophagosome maturation and antigen presentation in dendritic cells. mBio 3: e00267-00212. doi:10.1128/mBio.00267-12.
-
(2012)
MBio
, vol.3
, pp. e00267-00212
-
-
Gobeil, P.A.M.1
Leib, D.A.2
-
45
-
-
84860473144
-
Interplay between the cellular autophagy machinery and positive-stranded RNA viruses
-
Shi J, Luo H (2012) Interplay between the cellular autophagy machinery and positive-stranded RNA viruses. Acta Biochim Biophys Sin 44: 375-384. doi:10.1093/abbs/gms010.
-
(2012)
Acta Biochim Biophys Sin
, vol.44
, pp. 375-384
-
-
Shi, J.1
Luo, H.2
|