SCOPUS 정보 검색 플랫폼

Volumn 80, Issue 19, 2014, Pages 6167-6174

Engineering of Bacillus subtilis strains to allow rapid characterization of heterologous diguanylate cyclases and phosphodiesterases

[No Author Info available]

Author keywords

[No Author keywords available]

Indexed keywords

BACILLUS SUBTILIS STRAINS; DIGUANYLATE CYCLASES; PHOSPHODIESTERASES;

BACTERIUM; BIOENGINEERING; BIOFILM; CONCENTRATION (COMPOSITION); ENZYME ACTIVITY; FLUORESCENCE; MOTILITY; PROTEIN; SWARMING; THRESHOLD; VIRULENCE;

BACILLUS SUBTILIS;

BACTERIAL PROTEIN; BIS(3',5')-CYCLIC DIGUANYLIC ACID; CYCLIC GMP; DIGUANYLATE CYCLASE; ESCHERICHIA COLI PROTEIN; LYASE; PHOSPHODIESTERASE; RIBOSWITCH;

ANALOGS AND DERIVATIVES; BACILLUS SUBTILIS; BIOFILM; ENZYMOLOGY; FLUORESCENCE; GENE EXPRESSION; GENETIC ENGINEERING; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PEPTOCLOSTRIDIUM DIFFICILE; PHYSIOLOGY; REPORTER GENE; RIBOSWITCH; SIGNAL TRANSDUCTION; TRANSGENE; VIRULENCE;

BACILLUS SUBTILIS; BACTERIAL PROTEINS; BIOFILMS; CLOSTRIDIUM DIFFICILE; CYCLIC GMP; ESCHERICHIA COLI PROTEINS; FLUORESCENCE; GENE EXPRESSION; GENES, REPORTER; GENETIC ENGINEERING; PHOSPHORIC DIESTER HYDROLASES; PHOSPHORUS-OXYGEN LYASES; RIBOSWITCH; SIGNAL TRANSDUCTION; TRANSGENES; VIRULENCE;

EID: 84907020062 PISSN: 00992240 EISSN: 10985336 Source Type: Journal
DOI: 10.1128/AEM.01638-14 Document Type: Article

Times cited : (29)

References (64)

1
- 0023090935
- Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid
- Ross P, Weinhouse H, Aloni Y, Michaeli D, Weinberger-Ohana P, Mayer R, Braun S, de Vroom E, van der Marel GA, van Boom JH, Benziman M. 1987. Regulation of cellulose synthesis in Acetobacter xylinum by cyclic diguanylic acid. Nature 325:279-281. http://dx.doi.org/10 .1038/325279a0.
- (1987) Nature , vol.325 , pp. 279-281
- Ross, P.¹ Weinhouse, H.² Aloni, Y.³ Michaeli, D.⁴ Weinberger-Ohana, P.⁵ Mayer, R.⁶ Braun, S.⁷ de Vroom, E.⁸ van der Marel, G.A.⁹ van Boom, J.H.¹⁰ Benziman, M.¹¹

2
- 63049137897
- Principles of c-di-GMP signalling in bacteria
- Hengge R. 2009. Principles of c-di-GMP signalling in bacteria. Nat. Rev. Microbiol. 7:263-273. http://dx.doi.org/10.1038/nrmicro2109.
- (2009) Nat. Rev. Microbiol. , vol.7 , pp. 263-273
- Hengge, R.¹

3
- 33845403359
- Mechanisms of cyclic-di-GMP signaling in bacteria
- Jenal U, Malone J. 2006. Mechanisms of cyclic-di-GMP signaling in bacteria. Annu. Rev. Genet. 40:385-407. http://dx.doi.org/10.1146 /annurev.genet.40.110405.090423.
- (2006) Annu. Rev. Genet. , vol.40 , pp. 385-407
- Jenal, U.¹ Malone, J.²

4
- 77950629120
- Molecular mechanisms of compounds affecting bacterial biofilm formation and dispersal
- Landini P, Antoniani D, Burgess JG, Nijland R. 2010. Molecular mechanisms of compounds affecting bacterial biofilm formation and dispersal. Appl. Microbiol. Biotechnol. 86:813-823. http://dx.doi.org/10.1007 /s00253-010-2468-8.
- (2010) Appl. Microbiol. Biotechnol. , vol.86 , pp. 813-823
- Landini, P.¹ Antoniani, D.² Burgess, J.G.³ Nijland, R.⁴

5
- 22644438480
- c-di-GMP: the dawning of a novel bacterial signalling system
- Ro¨mling U, Gomelsky M, Galperin MY. 2005. c-di-GMP: the dawning of a novel bacterial signalling system. Mol. Microbiol. 57:629-639. http://dx .doi.org/10.1111/j.1365-2958.2005.04697.x.
- (2005) Mol. Microbiol. , vol.57 , pp. 629-639
- Ro¨mling, U.¹ Gomelsky, M.² Galperin, M.Y.³

6
- 82555185619
- Complex c-di-GMP signaling networks mediate transition between virulence properties and biofilm formation in Salmonella enterica serovar Typhimurium
- Ahmad I, Lamprokostopoulou A, Le Guyon S, Streck E, Barthel M, Peters V, Hardt WD, Romling U. 2011. Complex c-di-GMP signaling networks mediate transition between virulence properties and biofilm formation in Salmonella enterica serovar Typhimurium. PLoS One 6:e28351. http://dx.doi.org/10.1371/journal.pone.0028351.
- (2011) PLoS One , vol.6 , pp. e28351
- Ahmad, I.¹ Lamprokostopoulou, A.² Le Guyon, S.³ Streck, E.⁴ Barthel, M.⁵ Peters, V.⁶ Hardt, W.D.⁷ Romling, U.⁸

7
- 84874914744
- Cyclic di-GMP: the first 25 years of a universal bacterial second messenger
- Ro¨mling U, Galperin MY, Gomelsky M. 2013. Cyclic di-GMP: the first 25 years of a universal bacterial second messenger. Microbiol. Mol. Biol. Rev. 77:1-52. http://dx.doi.org/10.1128/MMBR.00043-12.
- (2013) Microbiol. Mol. Biol. Rev. , vol.77 , pp. 1-52
- Ro¨mling, U.¹ Galperin, M.Y.² Gomelsky, M.³

8
- 0035845587
- Novel domains of the prokaryotic two-component signal transduction systems
- Galperin MY, Nikolskaya AN, Koonin EV. 2001. Novel domains of the prokaryotic two-component signal transduction systems. FEMS Microbiol. Lett. 203:11-21. http://dx.doi.org/10.1111/j.1574-6968 .2001.tb10814.x.
- (2001) FEMS Microbiol. Lett. , vol.203 , pp. 11-21
- Galperin, M.Y.¹ Nikolskaya, A.N.² Koonin, E.V.³

9
- 0035899964
- Genetic data indicate that proteins containing theGGDEF domain possess diguanylate cyclase activity
- Ausmees N, Mayer R, Weinhouse H, Volman G, Amikam D, Benziman M, Lindberg M. 2001. Genetic data indicate that proteins containing theGGDEF domain possess diguanylate cyclase activity. FEMS Microbiol. Lett. 204:163- 167. http://dx.doi.org/10.1111/j.1574-6968.2001.tb10880.x.
- (2001) FEMS Microbiol. Lett. , vol.204 , pp. 163- 167
- Ausmees, N.¹ Mayer, R.² Weinhouse, H.³ Volman, G.⁴ Amikam, D.⁵ Benziman, M.⁶ Lindberg, M.⁷

10
- 10344238965
- Structural basis of activity and allosteric control of diguanylate cyclase
- Chan C, Paul R, Samoray D, Amiot NC, Giese B, Jenal U, Schirmer T. 2004. Structural basis of activity and allosteric control of diguanylate cyclase. Proc. Natl. Acad. Sci. U. S. A. 101:17084-17089. http://dx.doi.org /10.1073/pnas.0406134101.
- (2004) Proc. Natl. Acad. Sci. U. S. A. , vol.101 , pp. 17084-17089
- Chan, C.¹ Paul, R.² Samoray, D.³ Amiot, N.C.⁴ Giese, B.⁵ Jenal, U.⁶ Schirmer, T.⁷

11
- 14244254898
- Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into biochemistry of the GGDEF protein domain
- Ryjenkov DA, Tarutina M, Moskvin OV, Gomelsky M. 2005. Cyclic diguanylate is a ubiquitous signaling molecule in bacteria: insights into biochemistry of the GGDEF protein domain. J. Bacteriol. 187:1792-1798. http://dx.doi.org/10.1128/JB.187.5.1792-1798.2005.
- (2005) J. Bacteriol. , vol.187 , pp. 1792-1798
- Ryjenkov, D.A.¹ Tarutina, M.² Moskvin, O.V.³ Gomelsky, M.⁴

12
- 24744457756
- Identification and characterization of a cyclic di-GMP-specific phosphodiesterase and its allosteric control by GTP
- Christen M, Christen B, Folcher M, Schauerte A, Jenal U. 2005. Identification and characterization of a cyclic di-GMP-specific phosphodiesterase and its allosteric control by GTP. J. Biol. Chem. 280:30829-30837. http://dx.doi.org/10.1074/jbc.M504429200.
- (2005) J. Biol. Chem. , vol.280 , pp. 30829-30837
- Christen, M.¹ Christen, B.² Folcher, M.³ Schauerte, A.⁴ Jenal, U.⁵

13
- 20444385050
- The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation in Yersinia pestis
- Bobrov AG, Kirillina O, Perry RD. 2005. The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation in Yersinia pestis. FEMS Microbiol. Lett. 247:123-130. http: //dx.doi.org/10.1016/j.femsle.2005.04.036.
- (2005) FEMS Microbiol. Lett. , vol.247 , pp. 123-130
- Bobrov, A.G.¹ Kirillina, O.² Perry, R.D.³

14
- 25144489145
- The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase
- Tamayo R, Tischler AD, Camilli A. 2005. The EAL domain protein VieA is a cyclic diguanylate phosphodiesterase. J. Biol. Chem. 280:33324 - 33330. http://dx.doi.org/10.1074/jbc.M506500200.
- (2005) J. Biol. Chem. , vol.280 , pp. 33324 - 33330
- Tamayo, R.¹ Tischler, A.D.² Camilli, A.³

15
- 21844451590
- The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains
- Schmidt AJ, Ryjenkov DA, Gomelsky M. 2005. The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains. J. Bacteriol. 187:4774-4781. http: //dx.doi.org/10.1128/JB.187.14.4774-4781.2005.
- (2005) J. Bacteriol. , vol.187 , pp. 4774-4781
- Schmidt, A.J.¹ Ryjenkov, D.A.² Gomelsky, M.³

16
- 47049115663
- Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase: a study of the EAL domaincontaining RocR from Pseudomonas aeruginosa
- Rao F, Yang Y, Qi Y, Liang ZX. 2008. Catalytic mechanism of cyclic di-GMP-specific phosphodiesterase: a study of the EAL domaincontaining RocR from Pseudomonas aeruginosa. J. Bacteriol. 190:3622- 3631. http://dx.doi.org/10.1128/JB.00165-08.
- (2008) J. Bacteriol. , vol.190 , pp. 3622- 3631
- Rao, F.¹ Yang, Y.² Qi, Y.³ Liang, Z.X.⁴

17
- 70349274104
- Structural and mechanistic determinants of c-di-GMP signalling
- Schirmer T, Jenal U. 2009. Structural and mechanistic determinants of c-di-GMP signalling. Nat. Rev. Microbiol. 7:724-735. http://dx.doi.org /10.1038/nrmicro2203.
- (2009) Nat. Rev. Microbiol. , vol.7 , pp. 724-735
- Schirmer, T.¹ Jenal, U.²

18
- 77956921553
- Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases
- Tchigvintsev A, Xu X, Singer A, Chang C, Brown G, Proudfoot M, Cui H, Flick R, Anderson WF, Joachimiak A, Galperin MY, Savchenko A, Yakunin AF. 2010. Structural insight into the mechanism of c-di-GMP hydrolysis by EAL domain phosphodiesterases. J. Mol. Biol. 402:524-538. http://dx.doi.org/10.1016/j.jmb.2010.07.050.
- (2010) J. Mol. Biol. , vol.402 , pp. 524-538
- Tchigvintsev, A.¹ Xu, X.² Singer, A.³ Chang, C.⁴ Brown, G.⁵ Proudfoot, M.⁶ Cui, H.⁷ Flick, R.⁸ Anderson, W.F.⁹ Joachimiak, A.¹⁰ Galperin, M.Y.¹¹ Savchenko, A.¹² Yakunin, A.F.¹³

19
- 30344469912
- PilZ domain is part of the bacterial c-di-GMP binding protein
- Amikam D, Galperin MY. 2006. PilZ domain is part of the bacterial c-di-GMP binding protein. Bioinformatics 22:3-6. http://dx.doi.org/10 .1093/bioinformatics/bti739.
- (2006) Bioinformatics , vol.22 , pp. 3-6
- Amikam, D.¹ Galperin, M.Y.²

20
- 33750044865
- The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria
- Ryjenkov DA, Simm R, Romling U, Gomelsky M. 2006. The PilZ domain is a receptor for the second messenger c-di-GMP: the PilZ domain protein YcgR controls motility in enterobacteria. J. Biol. Chem. 281: 30310-30314. http://dx.doi.org/10.1074/jbc.C600179200.
- (2006) J. Biol. Chem. , vol.281 , pp. 30310-30314
- Ryjenkov, D.A.¹ Simm, R.² Romling, U.³ Gomelsky, M.⁴

21
- 37149042731
- The structural basis of cyclic diguanylate signal transduction by PilZ domains
- Benach J, Swaminathan SS, Tamayo R, Handelman SK, Folta-Stogniew E, Ramos JE, Forouhar F, Neely H, Seetharaman J, Camilli A, Hunt JF. 2007. The structural basis of cyclic diguanylate signal transduction by PilZ domains. EMBO J. 26:5153-5166. http://dx.doi.org/10.1038/sj.emboj.7601918.
- (2007) EMBO J. , vol.26 , pp. 5153-5166
- Benach, J.¹ Swaminathan, S.S.² Tamayo, R.³ Handelman, S.K.⁴ Folta-Stogniew, E.⁵ Ramos, J.E.⁶ Forouhar, F.⁷ Neely, H.⁸ Seetharaman, J.⁹ Camilli, A.¹⁰ Hunt, J.F.¹¹

22
- 34247213819
- DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus
- Christen M, Christen B, Allan MG, Folcher M, Jeno P, Grzesiek S, Jenal U. 2007. DgrA is a member of a new family of cyclic diguanosine monophosphate receptors and controls flagellar motor function in Caulobacter crescentus. Proc. Natl. Acad. Sci. U. S. A. 104:4112-4117. http://dx.doi .org/10.1073/pnas.0607738104.
- (2007) Proc. Natl. Acad. Sci. U. S. A. , vol.104 , pp. 4112-4117
- Christen, M.¹ Christen, B.² Allan, M.G.³ Folcher, M.⁴ Jeno, P.⁵ Grzesiek, S.⁶ Jenal, U.⁷

23
- 77950928649
- Second messenger-mediated adjustment of bacterial swimming velocity
- Boehm A, Kaiser M, Li H, Spangler C, Kasper CA, Ackermann M, Kaever V, Sourjik V, Roth V, Jenal U. 2010. Second messenger-mediated adjustment of bacterial swimming velocity. Cell 141:107-116. http://dx .doi.org/10.1016/j.cell.2010.01.018.
- (2010) Cell , vol.141 , pp. 107-116
- Boehm, A.¹ Kaiser, M.² Li, H.³ Spangler, C.⁴ Kasper, C.A.⁵ Ackermann, M.⁶ Kaever, V.⁷ Sourjik, V.⁸ Roth, V.⁹ Jenal, U.¹⁰

24
- 77950370030
- The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism
- Paul K, Nieto V, Carlquist WC, Blair DF, Harshey RM. 2010. The c-di-GMP binding protein YcgR controls flagellar motor direction and speed to affect chemotaxis by a "backstop brake" mechanism. Mol. Cell 38:128-139. http://dx.doi.org/10.1016/j.molcel.2010.03.001.
- (2010) Mol. Cell , vol.38 , pp. 128-139
- Paul, K.¹ Nieto, V.² Carlquist, W.C.³ Blair, D.F.⁴ Harshey, R.M.⁵

25
- 84871200600
- LtmA, a novel cyclic di-GMP-responsive activator, broadly regulates the expression of lipid transport and metabolism genes in Mycobacterium smegmatis
- Li W, He ZG. 2012. LtmA, a novel cyclic di-GMP-responsive activator, broadly regulates the expression of lipid transport and metabolism genes in Mycobacterium smegmatis. Nucleic Acids Res. 40:11292-11307. http: //dx.doi.org/10.1093/nar/gks923.
- (2012) Nucleic Acids Res. , vol.40 , pp. 11292-11307
- Li, W.¹ He, Z.G.²

26
- 84860905515
- Discrete cyclic di-GMP-dependent control of bacterial predation versus axenic growth in Bdellovibrio bacteriovorus
- Hobley L, Fung RKY, Lambert C, Harris MATS, Dabhi JM, King SS, Basford SM, Uchida K, Till R, Ahmad R, Aizawa S, Gomelsky M, Sockett RE. 2012. Discrete cyclic di-GMP-dependent control of bacterial predation versus axenic growth in Bdellovibrio bacteriovorus. PloS Pathog. 8:e1002493. http://dx.doi.org/10.1371/journal.ppat.1002493.
- (2012) PloS Pathog. , vol.8 , pp. e1002493
- Hobley, L.¹ Fung, R.K.Y.² Lambert, C.³ Harris, M.A.T.S.⁴ Dabhi, J.M.⁵ King, S.S.⁶ Basford, S.M.⁷ Uchida, K.⁸ Till, R.⁹ Ahmad, R.¹⁰ Aizawa, S.¹¹ Gomelsky, M.¹² Sockett, R.E.¹³

27
- 58149485506
- Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression
- Duerig A, Abel S, Folcher M, Nicollier M, Schwede T, Amiot N, Giese B, Jenal U. 2009. Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression. Genes Dev. 23:93-104. http://dx.doi.org/10.1101/gad.502409.
- (2009) Genes Dev. , vol.23 , pp. 93-104
- Duerig, A.¹ Abel, S.² Folcher, M.³ Nicollier, M.⁴ Schwede, T.⁵ Amiot, N.⁶ Giese, B.⁷ Jenal, U.⁸

28
- 84862777062
- The orphan histidine protein kinase SgmT is a c-di-GMP receptor and regulates composition of the extracellular matrix together with the orphan DNA binding response regulator DigR in Myxococcus xanthus
- Petters T, Zhang X, Nesper J, Treuner-Lange A, Gomez-Santos N, Hoppert M, Jenal U, Sogaard-Andersen L. 2012. The orphan histidine protein kinase SgmT is a c-di-GMP receptor and regulates composition of the extracellular matrix together with the orphan DNA binding response regulator DigR in Myxococcus xanthus. Mol. Microbiol. 84:147-165. http://dx.doi.org/10.1111/j.1365-2958.2012.08015.x.
- (2012) Mol. Microbiol. , vol.84 , pp. 147-165
- Petters, T.¹ Zhang, X.² Nesper, J.³ Treuner-Lange, A.⁴ Gomez-Santos, N.⁵ Hoppert, M.⁶ Jenal, U.⁷ Sogaard-Andersen, L.⁸

29
- 84863611012
- Structure of the cytoplasmic region of PelD, a degenerate diguanylate cyclase receptor that regulates exopolysaccharide production in Pseudomonas aeruginosa
- Whitney JC, Colvin KM, Marmont LS, Robinson H, Parsek MR, Howell PL. 2012. Structure of the cytoplasmic region of PelD, a degenerate diguanylate cyclase receptor that regulates exopolysaccharide production in Pseudomonas aeruginosa. J. Biol. Chem. 287:23582-23593. http://dx.doi .org/10.1074/jbc.M112.375378.
- (2012) J. Biol. Chem. , vol.287 , pp. 23582-23593
- Whitney, J.C.¹ Colvin, K.M.² Marmont, L.S.³ Robinson, H.⁴ Parsek, M.R.⁵ Howell, P.L.⁶

30
- 34548303826
- A cyclic-di-GMP receptor required for bacterial exopolysaccharide production
- Lee VT, Matewish JM, Kessler JL, Hyodo M, Hayakawa Y, Lory S. 2007. A cyclic-di-GMP receptor required for bacterial exopolysaccharide production. Mol. Microbiol. 65:1474-1484. http://dx.doi.org/10.1111/j.1365 -2958.2007.05879.x.
- (2007) Mol. Microbiol. , vol.65 , pp. 1474-1484
- Lee, V.T.¹ Matewish, J.M.² Kessler, J.L.³ Hyodo, M.⁴ Hayakawa, Y.⁵ Lory, S.⁶

31
- 62549150834
- LapD is a bis-(3=,5=)-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1
- Newell PD, Monds RD, O'Toole GA. 2009. LapD is a bis-(3=,5=)-cyclic dimeric GMP-binding protein that regulates surface attachment by Pseudomonas fluorescens Pf0-1. Proc. Natl. Acad. Sci. U. S. A. 106:3461-3466. http://dx.doi.org/10.1073/pnas.0808933106.
- (2009) Proc. Natl. Acad. Sci. U. S. A. , vol.106 , pp. 3461-3466
- Newell, P.D.¹ Monds, R.D.² O'Toole, G.A.³

32
- 33646397872
- Analysis of FimX, a phosphodiesterase that governs twitching motility in Pseudomonas aeruginosa
- Kazmierczak BI, Lebron MB, Murray TS. 2006. Analysis of FimX, a phosphodiesterase that governs twitching motility in Pseudomonas aeruginosa. Mol. Microbiol. 60:1026-1043. http://dx.doi.org/10.1111/j .1365-2958.2006.05156.x.
- (2006) Mol. Microbiol. , vol.60 , pp. 1026-1043
- Kazmierczak, B.I.¹ Lebron, M.B.² Murray, T.S.³

33
- 76749083886
- Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP
- Krasteva PV, Fong JCN, Shikuma NJ, Beyhan S, Navarro MVAS, Yildiz FH, Sondermann H. 2010. Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP. Science 327:866- 868. http://dx.doi.org/10.1126/science.1181185.
- (2010) Science , vol.327 , pp. 866- 868
- Krasteva, P.V.¹ Fong, J.C.N.² Shikuma, N.J.³ Beyhan, S.⁴ Navarro, M.V.A.S.⁵ Yildiz, F.H.⁶ Sondermann, H.⁷

34
- 47249089614
- Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor
- Hickman JW, Harwood CS. 2008. Identification of FleQ from Pseudomonas aeruginosa as a c-di-GMP-responsive transcription factor. Mol. Microbiol. 69:376 -389. http://dx.doi.org/10.1111/j.1365-2958 .2008.06281.x.
- (2008) Mol. Microbiol. , vol.69 , pp. 376 -389
- Hickman, J.W.¹ Harwood, C.S.²

35
- 80655125443
- Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae
- Srivastava D, Harris RC, Waters CM. 2011. Integration of cyclic di-GMP and quorum sensing in the control of vpsT and aphA in Vibrio cholerae. J. Bacteriol. 193:6331-6341. http://dx.doi.org/10.1128/JB.05167-11.
- (2011) J. Bacteriol. , vol.193 , pp. 6331-6341
- Srivastava, D.¹ Harris, R.C.² Waters, C.M.³

36
- 80053932725
- The CRP/FNR family protein Bcam1349 is a c-di-GMP effector that regulates biofilm formation in the respiratory pathogen Burkholderia cenocepacia
- Fazli M, O'Connell A, Nilsson M, Niehaus K, Dow JM, Givskov M, Ryan RP, Tolker-Nielsen T. 2011. The CRP/FNR family protein Bcam1349 is a c-di-GMP effector that regulates biofilm formation in the respiratory pathogen Burkholderia cenocepacia. Mol. Microbiol. 82:327- 341. http://dx.doi.org/10.1111/j.1365-2958.2011.07814.x.
- (2011) Mol. Microbiol. , vol.82 , pp. 327- 341
- Fazli, M.¹ O'Connell, A.² Nilsson, M.³ Niehaus, K.⁴ Dow, J.M.⁵ Givskov, M.⁶ Ryan, R.P.⁷ Tolker-Nielsen, T.⁸

37
- 70350436270
- Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv
- Leduc JL, Roberts GP. 2009. Cyclic di-GMP allosterically inhibits the CRP-like protein (Clp) of Xanthomonas axonopodis pv. citri. J. Bacteriol. 191:7121-7122. http://dx.doi.org/10.1128/JB.00845-09.
- (2009) citri. J. Bacteriol. , vol.191 , pp. 7121-7122
- Leduc, J.L.¹ Roberts, G.P.²

38
- 84857875318
- Output targets and transcriptional regulation by a cyclic dimeric GMP-responsive circuit in the Vibrio parahaemolyticus Scr network
- Ferreira RBR, Chodur DM, Antunes LCM, Trimble MJ, McCarter LL. 2012. Output targets and transcriptional regulation by a cyclic dimeric GMP-responsive circuit in the Vibrio parahaemolyticus Scr network. J. Bacteriol. 194:914-924. http://dx.doi.org/10.1128/JB.05807-11.
- (2012) J. Bacteriol. , vol.194 , pp. 914-924
- Ferreira, R.B.R.¹ Chodur, D.M.² Antunes, L.C.M.³ Trimble, M.J.⁴ McCarter, L.L.⁵

39
- 47749152941
- Riboswitches in eubacteria sense the second messenger cyclic di-GMP
- Sudarsan N, Lee ER, Weinberg Z, Moy RH, Kim JN, Link KH, Breaker RR. 2008. Riboswitches in eubacteria sense the second messenger cyclic di-GMP. Science 321:411-413. http://dx.doi.org/10.1126/science.1159519.
- (2008) Science , vol.321 , pp. 411-413
- Sudarsan, N.¹ Lee, E.R.² Weinberg, Z.³ Moy, R.H.⁴ Kim, J.N.⁵ Link, K.H.⁶ Breaker, R.R.⁷

40
- 77955630859
- An allosteric self-splicing ribozyme triggered by a bacterial second messenger
- Lee ER, Baker JL, Weinberg Z, Sudarsan N, Breaker RR. 2010. An allosteric self-splicing ribozyme triggered by a bacterial second messenger. Science 329:845-848. http://dx.doi.org/10.1126/science.1190713.
- (2010) Science , vol.329 , pp. 845-848
- Lee, E.R.¹ Baker, J.L.² Weinberg, Z.³ Sudarsan, N.⁴ Breaker, R.R.⁵

41
- 76649134086
- Monitoring of diguanylate cyclase activity and of cyclic-di-GMP biosynthesis by whole-cell assays suitable for high-throughput screening of biofilm inhibitors
- Antoniani D, Bocci P, Maciag A, Raffaelli N, Landini P. 2010. Monitoring of diguanylate cyclase activity and of cyclic-di-GMP biosynthesis by whole-cell assays suitable for high-throughput screening of biofilm inhibitors. Appl. Microbiol. Biotechnol. 85:1095-1104. http://dx.doi.org/10 .1007/s00253-009-2199-x.
- (2010) Appl. Microbiol. Biotechnol. , vol.85 , pp. 1095-1104
- Antoniani, D.¹ Bocci, P.² Maciag, A.³ Raffaelli, N.⁴ Landini, P.⁵

42
- 84899869588
- A deletion mutant library to investigate the functional outputs of c-di-GMP metabolism in Pseudomonas aeruginosa PA14
- Ha DG, Richman ME, O'Toole GA. 2014. A deletion mutant library to investigate the functional outputs of c-di-GMP metabolism in Pseudomonas aeruginosa PA14. Appl. Environ. Microbiol. 80:3384-3393. http://dx .doi.org/10.1128/AEM.00299-14.
- (2014) Appl. Environ. Microbiol. , vol.80 , pp. 3384-3393
- Ha, D.G.¹ Richman, M.E.² O'Toole, G.A.³

43
- 84886035253
- Functional characterization of core components of the Bacillus subtilis cyclic-di-GMP signaling pathway
- Gao XH, Mukherjee S, Matthews PM, Hammad LA, Kearns DB, Dann CE. 2013. Functional characterization of core components of the Bacillus subtilis cyclic-di-GMP signaling pathway. J. Bacteriol. 195:4782-4792. http://dx.doi.org/10.1128/JB.00373-13.
- (2013) J. Bacteriol. , vol.195 , pp. 4782-4792
- Gao, X.H.¹ Mukherjee, S.² Matthews, P.M.³ Hammad, L.A.⁴ Kearns, D.B.⁵ Dann, C.E.⁶

44
- 84868372310
- Enzymatically active and inactive phosphodiesterases and diguanylate cyclases are involved in regulation of motility or sessility in Escherichia coli CFT073
- Spurbeck RR, Tarrien RJ, Mobley HL. 2012. Enzymatically active and inactive phosphodiesterases and diguanylate cyclases are involved in regulation of motility or sessility in Escherichia coli CFT073. mBio 3:e00307-12. http://dx.doi.org/10.1128/mBio.00307-12.
- (2012) mBio , vol.3 , pp. e00307-e00312
- Spurbeck, R.R.¹ Tarrien, R.J.² Mobley, H.L.³

45
- 79953733174
- c-di-GMP turnover in Clostridium difficile is controlled by a plethora of diguanylate cyclases and phosphodiesterases
- Bordeleau E, Fortier LC, Malouin F, Burrus V. 2011. c-di-GMP turnover in Clostridium difficile is controlled by a plethora of diguanylate cyclases and phosphodiesterases. PLoS Genet. 7:e1002039. http://dx.doi .org/10.1371/journal.pgen.1002039.
- (2011) PLoS Genet. , vol.7 , pp. e1002039
- Bordeleau, E.¹ Fortier, L.C.² Malouin, F.³ Burrus, V.⁴

46
- 84864023989
- Cyclic diguanylate inversely regulates motility and aggregation in Clostridium difficile
- Purcell EB, McKee RW, McBride SM, Waters CM, Tamayo R. 2012. Cyclic diguanylate inversely regulates motility and aggregation in Clostridium difficile. J. Bacteriol. 194:3307-3316. http://dx.doi.org/10.1128 /JB.00100-12.
- (2012) J. Bacteriol. , vol.194 , pp. 3307-3316
- Purcell, E.B.¹ McKee, R.W.² McBride, S.M.³ Waters, C.M.⁴ Tamayo, R.⁵

47
- 84903642291
- Comprehensive overexpression analysis of cyclic-di-GMP signalling proteins in the phytopathogen Pectobacterium atrosepticum reveals diverse effects on motility and virulence phenotypes
- Tan H, West JA, Ramsay JP, Monson RE, Griffin JL, Toth IK, Salmond GP. 2014. Comprehensive overexpression analysis of cyclic-di-GMP signalling proteins in the phytopathogen Pectobacterium atrosepticum reveals diverse effects on motility and virulence phenotypes. Microbiology 160:1427-1439. http://dx.doi.org/10.1099/mic.0.076828-0.
- (2014) Microbiology , vol.160 , pp. 1427-1439
- Tan, H.¹ West, J.A.² Ramsay, J.P.³ Monson, R.E.⁴ Griffin, J.L.⁵ Toth, I.K.⁶ Salmond, G.P.⁷

48
- 84900544329
- Genomic analysis of cyclic-di-GMP-related genes in rhizobial type strains and functional analysis in Rhizobium etli
- Gao S, Romdhane SB, Beullens S, Kaever V, Lambrichts I, Fauvart M, Michiels J. 2014. Genomic analysis of cyclic-di-GMP-related genes in rhizobial type strains and functional analysis in Rhizobium etli. Appl. Microbiol. Biotechnol. 98:4589-4602. http://dx.doi.org/10.1007/s00253 -014-5722-7.
- (2014) Appl. Microbiol. Biotechnol. , vol.98 , pp. 4589-4602
- Gao, S.¹ Romdhane, S.B.² Beullens, S.³ Kaever, V.⁴ Lambrichts, I.⁵ Fauvart, M.⁶ Michiels, J.⁷

49
- 77952580705
- A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate
- Spangler C, Bohm A, Jenal U, Seifert R, Kaever V. 2010. A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate. J. Microbiol. Methods 81: 226-231. http://dx.doi.org/10.1016/j.mimet.2010.03.020.
- (2010) J. Microbiol. Methods , vol.81 , pp. 226-231
- Spangler, C.¹ Bohm, A.² Jenal, U.³ Seifert, R.⁴ Kaever, V.⁵

50
- 84885990298
- The characterization of a cyclic-di-GMP (c-di-GMP) pathway leads to a new tool for studying c-di-GMP metabolic genes
- Tamayo R. 2013. The characterization of a cyclic-di-GMP (c-di-GMP) pathway leads to a new tool for studying c-di-GMP metabolic genes. J. Bacteriol. 195:4779-4781. http://dx.doi.org/10.1128/JB.00925-13.
- (2013) J. Bacteriol. , vol.195 , pp. 4779-4781
- Tamayo, R.¹

51
- 67349270900
- Enzymatic assembly of DNA molecules up to several hundred kilobases
- Gibson DG, Young L, Chuang RY, Venter JC, Hutchison CA, III, Smith HO. 2009. Enzymatic assembly of DNA molecules up to several hundred kilobases. Nat. Methods 6:343-345. http://dx.doi.org/10.1038/nmeth .1318.
- (2009) Nat. Methods , vol.6 , pp. 343-345
- Gibson, D.G.¹ Young, L.² Chuang, R.Y.³ Venter, J.C.⁴ Hutchison I.I.I, C.A.⁵ Smith, H.O.⁶

52
- 78049323797
- Chemical synthesis of the mouse mitochondrial genome
- Gibson DG, Smith HO, Hutchison CA, III, Venter JC, Merryman C. 2010. Chemical synthesis of the mouse mitochondrial genome. Nat. Methods 7:901-903. http://dx.doi.org/10.1038/nmeth.1515.
- (2010) Nat. Methods , vol.7 , pp. 901-903
- Gibson, D.G.¹ Smith, H.O.² Hutchison I.I.I, C.A.³ Venter, J.C.⁴ Merryman, C.⁵

53
- 0016352815
- Transduction in Bacillus subtilis by bacteriophage SPP1
- Yasbin RE, Young FE. 1974. Transduction in Bacillus subtilis by bacteriophage SPP1. J. Virol. 14:1343-1348.
- (1974) J. Virol. , vol.14 , pp. 1343-1348
- Yasbin, R.E.¹ Young, F.E.²

54
- 0036192373
- An investigation into the compartmentalization of the sporulation transcription factor E in Bacillus subtilis
- Fujita M, Losick R. 2002. An investigation into the compartmentalization of the sporulation transcription factor E in Bacillus subtilis. Mol. Microbiol. 43:27-38. http://dx.doi.org/10.1046/j.1365-2958.2002.02732.x.
- (2002) Mol. Microbiol. , vol.43 , pp. 27-38
- Fujita, M.¹ Losick, R.²

55
- 34548253368
- Structure and mechanism of a metal-sensing regulatory RNA
- Dann CE, Wakeman CA, Sieling CL, Baker SC, Irnov I, Winkler WC. 2007. Structure and mechanism of a metal-sensing regulatory RNA. Cell 130:878-892. http://dx.doi.org/10.1016/j.cell.2007.06.051.
- (2007) Cell , vol.130 , pp. 878-892
- Dann, C.E.¹ Wakeman, C.A.² Sieling, C.L.³ Baker, S.C.⁴ Irnov, I.⁵ Winkler, W.C.⁶

56
- 36949020332
- An improved method of gene synthesis based on DNA works software and overlap extension PCR
- Dong B, Mao R, Li B, Liu Q, Xu P, Li G. 2007. An improved method of gene synthesis based on DNA works software and overlap extension PCR. Mol. Biotechnol. 37:195-200. http://dx.doi.org/10.1007/s12033-007-0039-8.
- (2007) Mol. Biotechnol. , vol.37 , pp. 195-200
- Dong, B.¹ Mao, R.² Li, B.³ Liu, Q.⁴ Xu, P.⁵ Li, G.⁶

57
- 0041664046
- Swarming motility in undomesticated Bacillus subtilis
- Kearns DB, Losick R. 2003. Swarming motility in undomesticated Bacillus subtilis. Mol. Microbiol. 49:581-590. http://dx.doi.org/10.1046/j.1365 -2958.2003.03584.x.
- (2003) Mol. Microbiol. , vol.49 , pp. 581-590
- Kearns, D.B.¹ Losick, R.²

58
- 84872543206
- A decade of riboswitches
- Serganov A, Nudler E. 2013. A decade of riboswitches. Cell 152:17-24. http://dx.doi.org/10.1016/j.cell.2012.12.024.
- (2013) Cell , vol.152 , pp. 17-24
- Serganov, A.¹ Nudler, E.²

59
- 18744396047
- Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria
- Mironov AS, Gusarov I, Rafikov R, Lopez LE, Shatalin K, Kreneva RA, Perumov DA, Nudler E. 2002. Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria. Cell 111:747-756. http: //dx.doi.org/10.1016/S0092-8674(02)01134-0.
- (2002) Cell , vol.111 , pp. 747-756
- Mironov, A.S.¹ Gusarov, I.² Rafikov, R.³ Lopez, L.E.⁴ Shatalin, K.⁵ Kreneva, R.A.⁶ Perumov, D.A.⁷ Nudler, E.⁸

60
- 0036753365
- Genetic control by a metabolite binding mRNA
- Nahvi A, Sudarsan N, Ebert MS, Zou X, Brown KL, Breaker RR. 2002. Genetic control by a metabolite binding mRNA. Chem. Biol. 9:1043- 1049. http://dx.doi.org/10.1016/S1074-5521(02)00224-7.
- (2002) Chem. Biol. , vol.9 , pp. 1043- 1049
- Nahvi, A.¹ Sudarsan, N.² Ebert, M.S.³ Zou, X.⁴ Brown, K.L.⁵ Breaker, R.R.⁶

61
- 0037206833
- Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression
- Winkler W, Nahvi A, Breaker RR. 2002. Thiamine derivatives bind messenger RNAs directly to regulate bacterial gene expression. Nature 419:952-956. http://dx.doi.org/10.1038/nature01145.
- (2002) Nature , vol.419 , pp. 952-956
- Winkler, W.¹ Nahvi, A.² Breaker, R.R.³

62
- 0346687595
- The riboswitch control of bacterial metabolism
- Nudler E, Mironov AS. 2004. The riboswitch control of bacterial metabolism. Trends Biochem. Sci. 29:11-17. http://dx.doi.org/10.1016/j.tibs.2003.11 .004.
- (2004) Trends Biochem. Sci. , vol.29 , pp. 11-17
- Nudler, E.¹ Mironov, A.S.²

63
- 20444478991
- Riboswitches as versatile gene control elements
- Tucker BJ, Breaker RR. 2005. Riboswitches as versatile gene control elements. Curr. Opin. Struct. Biol. 15:342-348. http://dx.doi.org/10.1016 /j.sbi.2005.05.003.
- (2005) Curr. Opin. Struct. Biol. , vol.15 , pp. 342-348
- Tucker, B.J.¹ Breaker, R.R.²

64
- 84887241442
- The second messenger cyclic di-GMP regulates Clostridium difficile toxin production by controlling expression of sigD
- McKee RW, Mangalea MR, Purcell EB, Borchardt EK, Tamayo R. 2013. The second messenger cyclic di-GMP regulates Clostridium difficile toxin production by controlling expression of sigD. J. Bacteriol. 195:5174-5185. http://dx.doi.org/10.1128/JB.00501-13.
- (2013) J. Bacteriol. , vol.195 , pp. 5174-5185
- McKee, R.W.¹ Mangalea, M.R.² Purcell, E.B.³ Borchardt, E.K.⁴ Tamayo, R.⁵

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.