메뉴 건너뛰기




Volumn 289, Issue 34, 2014, Pages 23882-23892

Paradoxical role of DNA methylation in activation of FoxA2 gene expression during endoderm development

Author keywords

[No Author keywords available]

Indexed keywords

ALKYLATION; BIOCHEMISTRY; CELLS; CHEMICAL ACTIVATION; CYTOLOGY; HISTOLOGY; PROTEINS; TISSUE;

EID: 84906545305     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M114.573469     Document Type: Article
Times cited : (84)

References (45)
  • 1
    • 11144314914 scopus 로고    scopus 로고
    • The molecular basis of pluripotency in mouse embryonic stem cells
    • Chambers, I.
    • Chambers, I. (2004) The molecular basis of pluripotency in mouse embryonic stem cells. Cloning Stem Cells 6, 386-391
    • (2004) Cloning Stem Cells , vol.6 , pp. 386-391
  • 2
    • 9744245280 scopus 로고    scopus 로고
    • Self-renewal vs differentiation of mouse embryonic stem cells
    • O'Shea, K. S. (2004) Self-renewal vs. differentiation of mouse embryonic stem cells. Biol. Reprod. 71, 1755-1765
    • (2004) Biol. Reprod. , vol.71 , pp. 1755-1765
    • O'shea, K.S.1
  • 3
    • 0035057914 scopus 로고    scopus 로고
    • From stem cells to beta cells: New strategies in cell therapy of diabetes mellitus
    • Soria, B., Skoudy, A., and Martín, F. (2001) From stem cells to beta cells: new strategies in cell therapy of diabetes mellitus. Diabetologia 44, 407-415
    • (2001) Diabetologia , vol.44 , pp. 407-415
    • Soria, B.1    Skoudy, A.2    Martín, F.3
  • 4
    • 48049098134 scopus 로고    scopus 로고
    • Molecular basis of pluripotency
    • Chen, L., and Daley, G. Q. (2008) Molecular basis of pluripotency. Hum. Mol. Genet. 17, R23-R27
    • (2008) Hum. Mol. Genet. , vol.17
    • Chen, L.1    Daley, G.Q.2
  • 5
    • 0027425136 scopus 로고
    • The formation and maintenance of the definitive endoderm lineage in the mouse: Involvement of HNF3/forkhead proteins
    • Ang, S. L., Wierda, A., Wong, D., Stevens, K. A., Cascio, S., Rossant, J., and Zaret, K. S. (1993) The formation and maintenance of the definitive endoderm lineage in the mouse: involvement of HNF3/forkhead proteins. Development 119, 1301-1315
    • (1993) Development , vol.119 , pp. 1301-1315
    • Ang, S.L.1    Wierda, A.2    Wong, D.3    Stevens, K.A.4    Cascio, S.5    Rossant, J.6    Zaret, K.S.7
  • 6
    • 0027425313 scopus 로고
    • Postimplantation expression patterns indicate a role for the mouse forkhead/ HNF-3 alpha, beta and gamma genes in determination of the definitive endoderm, chordamesoderm and neuroectoderm
    • Monaghan, A. P., Kaestner, K. H., Grau, E., and Schütz, G. (1993) Postimplantation expression patterns indicate a role for the mouse forkhead/ HNF-3 alpha, beta and gamma genes in determination of the definitive endoderm, chordamesoderm and neuroectoderm. Development 119, 567-578
    • (1993) Development , vol.119 , pp. 567-578
    • Monaghan, A.P.1    Kaestner, K.H.2    Grau, E.3    Schütz, G.4
  • 7
    • 0027318791 scopus 로고
    • Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo
    • Sasaki, H., and Hogan, B. L. (1993) Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo. Development 118, 47-59
    • (1993) Development , vol.118 , pp. 47-59
    • Sasaki, H.1    Hogan, B.L.2
  • 8
    • 0345255908 scopus 로고    scopus 로고
    • Nodal signaling in vertebrate development
    • Schier, A. F. (2003) Nodal signaling in vertebrate development. Annu. Rev. Cell Dev. Biol. 19, 589-621
    • (2003) Annu. Rev. Cell Dev. Biol. , vol.19 , pp. 589-621
    • Schier, A.F.1
  • 9
    • 0028344596 scopus 로고
    • The HNF-3 gene family of transcription factors in mice: Gene structure, cDNA sequence, and mRNA distribution
    • Kaestner, K. H., Hiemisch, H., Luckow, B., and Schütz, G. (1994) The HNF-3 gene family of transcription factors in mice: gene structure, cDNA sequence, and mRNA distribution. Genomics 20, 377-385
    • (1994) Genomics , vol.20 , pp. 377-385
    • Kaestner, K.H.1    Hiemisch, H.2    Luckow, B.3    Schütz, G.4
  • 12
    • 80455144479 scopus 로고    scopus 로고
    • Pioneer transcription factors: Establishing competence for gene expression
    • Zaret, K. S., and Carroll, J. S. (2011) Pioneer transcription factors: establishing competence for gene expression. Genes Dev. 25, 2227-2241
    • (2011) Genes Dev. , vol.25 , pp. 2227-2241
    • Zaret, K.S.1    Carroll, J.S.2
  • 13
    • 10244257711 scopus 로고    scopus 로고
    • Immunohistochemical localization of Foxa1 and Foxa2 in mouse embryos and adult tissues
    • Besnard, V., Wert, S. E., Hull, W. M., and Whitsett, J. A. (2004) Immunohistochemical localization of Foxa1 and Foxa2 in mouse embryos and adult tissues. Gene Expr. Patterns 5, 193-208
    • (2004) Gene Expr. Patterns , vol.5 , pp. 193-208
    • Besnard, V.1    Wert, S.E.2    Hull, W.M.3    Whitsett, J.A.4
  • 15
    • 0035064927 scopus 로고    scopus 로고
    • Identification of essential sequence motifs in the node/notochord enhancer of Foxa2 (Hnf3beta) gene that are conserved across vertebrate species
    • Nishizaki, Y., Shimazu, K., Kondoh, H., and Sasaki, H. (2001) Identification of essential sequence motifs in the node/notochord enhancer of Foxa2 (Hnf3beta) gene that are conserved across vertebrate species. Mech. Dev. 102, 57-66
    • (2001) Mech. Dev. , vol.102 , pp. 57-66
    • Nishizaki, Y.1    Shimazu, K.2    Kondoh, H.3    Sasaki, H.4
  • 16
    • 0025281303 scopus 로고
    • Establishment of a pancreatic beta cell line that retains glucose-inducible insulin secretion: Special reference to expression of glucose transporter isoforms
    • Miyazaki, J., Araki, K., Yamato, E., Ikegami, H., Asano, T., Shibasaki, Y., Oka, Y., and Yamamura, K. (1990) Establishment of a pancreatic beta cell line that retains glucose-inducible insulin secretion: special reference to expression of glucose transporter isoforms. Endocrinology 127, 126-132
    • (1990) Endocrinology , vol.127 , pp. 126-132
    • Miyazaki, J.1    Araki, K.2    Yamato, E.3    Ikegami, H.4    Asano, T.5    Shibasaki, Y.6    Oka, Y.7    Yamamura, K.8
  • 17
    • 84865787065 scopus 로고    scopus 로고
    • Proteomics-based dissection of human endoderm progenitors by differential cell capture on antibody array
    • Sharivkin, R., Walker, M. D., and Soen, Y. (2012) Proteomics-based dissection of human endoderm progenitors by differential cell capture on antibody array. Mol. Cell. Proteomics 11, 586-595
    • (2012) Mol. Cell. Proteomics , vol.11 , pp. 586-595
    • Sharivkin, R.1    Walker, M.D.2    Soen, Y.3
  • 19
    • 84862005991 scopus 로고    scopus 로고
    • GPR41 gene expression is mediated by internal ribosome entry site (IRES)-dependent translation of bicistronic mRNA encoding GPR40 and GPR41 proteins
    • Bahar Halpern, K., Veprik, A., Rubins, N., Naaman, O., and Walker, M. D. (2012) GPR41 gene expression is mediated by internal ribosome entry site (IRES)-dependent translation of bicistronic mRNA encoding GPR40 and GPR41 proteins. J. Biol. Chem. 287, 20154-20163
    • (2012) J. Biol. Chem. , vol.287 , pp. 20154-20163
    • Bahar Halpern, K.1    Veprik, A.2    Rubins, N.3    Naaman, O.4    Walker, M.D.5
  • 22
    • 0026516677 scopus 로고
    • The restricted promoter activity of the liver transcription factor hepatocyte nuclear factor 3 beta involves a cell-specific factor and positive autoactivation
    • Pani, L., Quian, X. B., Clevidence, D., and Costa, R. H. (1992) The restricted promoter activity of the liver transcription factor hepatocyte nuclear factor 3 beta involves a cell-specific factor and positive autoactivation. Mol. Cell. Biol. 12, 552-562
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 552-562
    • Pani, L.1    Quian, X.B.2    Clevidence, D.3    Costa, R.H.4
  • 23
    • 76149142791 scopus 로고    scopus 로고
    • Polycomb complexes act redundantly to repress genomic repeats and genes
    • Leeb, M., Pasini, D., Novatchkova, M., Jaritz, M., Helin, K., and Wutz, A. (2010) Polycomb complexes act redundantly to repress genomic repeats and genes. Genes Dev. 24, 265-276
    • (2010) Genes Dev. , vol.24 , pp. 265-276
    • Leeb, M.1    Pasini, D.2    Novatchkova, M.3    Jaritz, M.4    Helin, K.5    Wutz, A.6
  • 24
    • 33646870495 scopus 로고    scopus 로고
    • Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions
    • Bracken, A. P., Dietrich, N., Pasini, D., Hansen, K. H., and Helin, K. (2006) Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions. Genes Dev. 20, 1123-1136
    • (2006) Genes Dev. , vol.20 , pp. 1123-1136
    • Bracken, A.P.1    Dietrich, N.2    Pasini, D.3    Hansen, K.H.4    Helin, K.5
  • 26
    • 34848911647 scopus 로고    scopus 로고
    • DNA methylation: The nuts and bolts of repression
    • Miranda, T. B., and Jones, P. A. (2007) DNA methylation: the nuts and bolts of repression. J. Cell. Physiol. 213, 384-390
    • (2007) J. Cell. Physiol. , vol.213 , pp. 384-390
    • Miranda, T.B.1    Jones, P.A.2
  • 28
    • 77954842322 scopus 로고    scopus 로고
    • Dnmt3a-dependent nonpromoter DNA methylation facilitates transcription of neurogenic genes
    • Wu, H., Coskun, V., Tao, J., Xie, W., Ge, W., Yoshikawa, K., Li, E., Zhang, Y., and Sun, Y. E. (2010) Dnmt3a-dependent nonpromoter DNA methylation facilitates transcription of neurogenic genes. Science 329, 444-448
    • (2010) Science , vol.329 , pp. 444-448
    • Wu, H.1    Coskun, V.2    Tao, J.3    Xie, W.4    Ge, W.5    Yoshikawa, K.6    Li, E.7    Zhang, Y.8    Sun, Y.E.9
  • 30
    • 0026742792 scopus 로고
    • CpG islands as gene markers in the human genome
    • Larsen, F., Gundersen, G., Lopez, R., and Prydz, H. (1992) CpG islands as gene markers in the human genome. Genomics 13, 1095-1107
    • (1992) Genomics , vol.13 , pp. 1095-1107
    • Larsen, F.1    Gundersen, G.2    Lopez, R.3    Prydz, H.4
  • 31
    • 0032960181 scopus 로고    scopus 로고
    • Cancer epigenetics comes of age
    • Jones, P. A., and Laird, P. W. (1999) Cancer epigenetics comes of age. Nat. Genet. 21, 163-167
    • (1999) Nat. Genet. , vol.21 , pp. 163-167
    • Jones, P.A.1    Laird, P.W.2
  • 32
    • 80054994283 scopus 로고    scopus 로고
    • Identification of genetic elements that autonomously determine DNA methylation states
    • Lienert, F., Wirbelauer, C., Som, I., Dean, A., Mohn, F., and Schübeler, D. (2011) Identification of genetic elements that autonomously determine DNA methylation states. Nat. Genet. 43, 1091-1097
    • (2011) Nat. Genet. , vol.43 , pp. 1091-1097
    • Lienert, F.1    Wirbelauer, C.2    Som, I.3    Dean, A.4    Mohn, F.5    Schübeler, D.6
  • 34
    • 84861916932 scopus 로고    scopus 로고
    • Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histonemodified DNA
    • Statham, A. L., Robinson, M. D., Song, J. Z., Coolen, M. W., Stirzaker, C., and Clark, S. J. (2012) Bisulfite sequencing of chromatin immunoprecipitated DNA (BisChIP-seq) directly informs methylation status of histonemodified DNA. Genome Res. 22, 1120-1127
    • (2012) Genome Res. , vol.22 , pp. 1120-1127
    • Statham, A.L.1    Robinson, M.D.2    Song, J.Z.3    Coolen, M.W.4    Stirzaker, C.5    Clark, S.J.6
  • 35
    • 0037372003 scopus 로고    scopus 로고
    • Epigenetic regulation of gene expression: How the genome integrates intrinsic and environmental signals
    • Jaenisch, R., and Bird, A. (2003) Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals. Nat. Genet. 33, 245-254
    • (2003) Nat. Genet. , vol.33 , pp. 245-254
    • Jaenisch, R.1    Bird, A.2
  • 39
    • 35148882985 scopus 로고    scopus 로고
    • Sp1/ Sp3 and DNA-methylation contribute to basal transcriptional activation of human podoplanin in MG63 versus Saos-2 osteoblastic cells
    • Hantusch, B., Kalt, R., Krieger, S., Puri, C., and Kerjaschki, D. (2007) Sp1/ Sp3 and DNA-methylation contribute to basal transcriptional activation of human podoplanin in MG63 versus Saos-2 osteoblastic cells.BMCMol. Biol. 8, 20
    • (2007) BMCMol. Biol. , vol.8 , pp. 20
    • Hantusch, B.1    Kalt, R.2    Krieger, S.3    Puri, C.4    Kerjaschki, D.5
  • 43
    • 77954100084 scopus 로고    scopus 로고
    • Transposable elements have rewired the core regulatory network of human embryonic stem cells
    • Kunarso, G., Chia, N. Y., Jeyakani, J., Hwang, C., Lu, X., Chan, Y. S., Ng, H. H., and Bourque, G. (2010) Transposable elements have rewired the core regulatory network of human embryonic stem cells. Nat. Genet. 42, 631-634
    • (2010) Nat. Genet. , vol.42 , pp. 631-634
    • Kunarso, G.1    Chia, N.Y.2    Jeyakani, J.3    Hwang, C.4    Lu, X.5    Chan, Y.S.6    Ng, H.H.7    Bourque, G.8
  • 44
    • 35148841515 scopus 로고    scopus 로고
    • Systemic therapy of spontaneous prostate cancer in transgenic mice with oncolytic herpes simplex viruses
    • Varghese, S., Rabkin, S. D., Nielsen, G. P., MacGarvey, U., Liu, R., and Martuza, R. L. (2007) Systemic therapy of spontaneous prostate cancer in transgenic mice with oncolytic herpes simplex viruses. Cancer Res. 67, 9371-9379
    • (2007) Cancer Res. , vol.67 , pp. 9371-9379
    • Varghese, S.1    Rabkin, S.D.2    Nielsen, G.P.3    Macgarvey, U.4    Liu, R.5    Martuza, R.L.6
  • 45
    • 57349112286 scopus 로고    scopus 로고
    • Generation and regeneration of cells of the liver and pancreas
    • Zaret, K. S., and Grompe, M. (2008) Generation and regeneration of cells of the liver and pancreas. Science 322, 1490-1494
    • (2008) Science , vol.322 , pp. 1490-1494
    • Zaret, K.S.1    Grompe, M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.