-
1
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
Bartel DP,. MicroRNAs: Target recognition and regulatory functions. Cell 2009; 136: 215-233.
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
2
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel DP,. MicroRNAs: Genomics, biogenesis, mechanism, and function. Cell 2004; 116: 281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
3
-
-
77952368550
-
Mammalian microRNAs: Experimental evaluation of novel and previously annotated genes
-
Chiang HR, Schoenfeld LW, Ruby JG, et al. Mammalian microRNAs: Experimental evaluation of novel and previously annotated genes. Genes Dev 2010; 24: 992-1009.
-
(2010)
Genes Dev
, vol.24
, pp. 992-1009
-
-
Chiang, H.R.1
Schoenfeld, L.W.2
Ruby, J.G.3
-
4
-
-
77955049511
-
Emerging roles of microRNAs in the control of embryonic stem cells and the generation of induced pluripotent stem cells
-
Mallanna SK, Rizzino A,. Emerging roles of microRNAs in the control of embryonic stem cells and the generation of induced pluripotent stem cells. Dev Biol 2010; 344: 16-25.
-
(2010)
Dev Biol
, vol.344
, pp. 16-25
-
-
Mallanna, S.K.1
Rizzino, A.2
-
5
-
-
79960015284
-
MicroRNA regulation of embryonic stem cell self-renewal and differentiation
-
Melton C, Blelloch R,. MicroRNA regulation of embryonic stem cell self-renewal and differentiation. Adv Exp Med Biol 2010; 695: 105-117.
-
(2010)
Adv Exp Med Biol
, vol.695
, pp. 105-117
-
-
Melton, C.1
Blelloch, R.2
-
6
-
-
56749091922
-
Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation
-
Wang Y, Baskerville S, Shenoy A, et al. Embryonic stem cell-specific microRNAs regulate the G1-S transition and promote rapid proliferation. Nat Genet 2008; 40: 1478-1483.
-
(2008)
Nat Genet
, vol.40
, pp. 1478-1483
-
-
Wang, Y.1
Baskerville, S.2
Shenoy, A.3
-
7
-
-
77954201278
-
A distinct microRNA signature for definitive endoderm derived from human embryonic stem cells
-
Hinton A, Afrikanova I, Wilson M, et al. A distinct microRNA signature for definitive endoderm derived from human embryonic stem cells. Stem Cells Dev 2010; 19: 797-807.
-
(2010)
Stem Cells Dev
, vol.19
, pp. 797-807
-
-
Hinton, A.1
Afrikanova, I.2
Wilson, M.3
-
8
-
-
39749140336
-
MicroRNA regulation of cell lineages in mouse and human embryonic stem cells
-
Ivey KN, Muth A, Arnold J, et al. MicroRNA regulation of cell lineages in mouse and human embryonic stem cells. Cell Stem Cell 2008; 2: 219-229.
-
(2008)
Cell Stem Cell
, vol.2
, pp. 219-229
-
-
Ivey, K.N.1
Muth, A.2
Arnold, J.3
-
9
-
-
65249093130
-
MiR-375 maintains normal pancreatic alpha- and beta-cell mass
-
Poy MN, Hausser J, Trajkovski M, et al. miR-375 maintains normal pancreatic alpha- and beta-cell mass. Proc Natl Acad Sci USA 2009; 106: 5813-5818.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 5813-5818
-
-
Poy, M.N.1
Hausser, J.2
Trajkovski, M.3
-
10
-
-
64549094131
-
The miR-430/427/302 family controls mesendodermal fate specification via species-specific target selection
-
Rosa A, Spagnoli FM, Brivanlou AH,. The miR-430/427/302 family controls mesendodermal fate specification via species-specific target selection. Dev Cell 2009; 16: 517-527.
-
(2009)
Dev Cell
, vol.16
, pp. 517-527
-
-
Rosa, A.1
Spagnoli, F.M.2
Brivanlou, A.H.3
-
11
-
-
84866420583
-
From pluripotency to islets: MiRNAs as critical regulators of human cellular differentiation
-
Hinton A, Hunter S, Reyes G, et al. From pluripotency to islets: miRNAs as critical regulators of human cellular differentiation. Adv Genet 2012; 79: 1-34.
-
(2012)
Adv Genet
, vol.79
, pp. 1-34
-
-
Hinton, A.1
Hunter, S.2
Reyes, G.3
-
12
-
-
76249119007
-
Opposing microRNA families regulate self-renewal in mouse embryonic stem cells
-
Melton C, Judson RL, Blelloch R,. Opposing microRNA families regulate self-renewal in mouse embryonic stem cells. Nature 2010; 463: 621-626.
-
(2010)
Nature
, vol.463
, pp. 621-626
-
-
Melton, C.1
Judson, R.L.2
Blelloch, R.3
-
13
-
-
0034794417
-
Feeder-free growth of undifferentiated human embryonic stem cells
-
Xu C, Inokuma MS, Denham J, et al. Feeder-free growth of undifferentiated human embryonic stem cells. Nat Biotechnol 2001; 19: 971-974.
-
(2001)
Nat Biotechnol
, vol.19
, pp. 971-974
-
-
Xu, C.1
Inokuma, M.S.2
Denham, J.3
-
14
-
-
0043123153
-
Vienna RNA secondary structure server
-
Hofacker IL,. Vienna RNA secondary structure server. Nucleic Acids Res 2003; 31: 3429-3431.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3429-3431
-
-
Hofacker, I.L.1
-
15
-
-
0025264854
-
The equilibrium partition function and base pair binding probabilities for RNA secondary structure
-
McCaskill JS,. The equilibrium partition function and base pair binding probabilities for RNA secondary structure. Biopolymers 1990; 29: 1105-1119.
-
(1990)
Biopolymers
, vol.29
, pp. 1105-1119
-
-
McCaskill, J.S.1
-
16
-
-
0019876473
-
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
-
Zuker M, Stiegler P,. Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res 1981; 9: 133-148.
-
(1981)
Nucleic Acids Res
, vol.9
, pp. 133-148
-
-
Zuker, M.1
Stiegler, P.2
-
17
-
-
77949572066
-
Faster computation of exact RNA shape probabilities
-
Janssen S, Giegerich R,. Faster computation of exact RNA shape probabilities. Bioinformatics 2010; 26: 632-639.
-
(2010)
Bioinformatics
, vol.26
, pp. 632-639
-
-
Janssen, S.1
Giegerich, R.2
-
18
-
-
32544440797
-
RNAshapes: An integrated RNA analysis package based on abstract shapes
-
Steffen P, Voss B, Rehmsmeier M, et al. RNAshapes: An integrated RNA analysis package based on abstract shapes. Bioinformatics 2006; 22: 500-503.
-
(2006)
Bioinformatics
, vol.22
, pp. 500-503
-
-
Steffen, P.1
Voss, B.2
Rehmsmeier, M.3
-
19
-
-
0034708122
-
The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans
-
Reinhart BJ, Slack FJ, Basson M, et al. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature 2000; 403: 901-906.
-
(2000)
Nature
, vol.403
, pp. 901-906
-
-
Reinhart, B.J.1
Slack, F.J.2
Basson, M.3
-
20
-
-
0024829771
-
Optimized use of the firefly luciferase assay as a reporter gene in mammalian cell lines
-
Brasier AR, Tate JE, Habener JF,. Optimized use of the firefly luciferase assay as a reporter gene in mammalian cell lines. Biotechniques 1989; 7: 1116-1122.
-
(1989)
Biotechniques
, vol.7
, pp. 1116-1122
-
-
Brasier, A.R.1
Tate, J.E.2
Habener, J.F.3
-
21
-
-
28644448149
-
Efficient differentiation of human embryonic stem cells to definitive endoderm
-
D'Amour KA, Agulnick AD, Eliazer S, et al. Efficient differentiation of human embryonic stem cells to definitive endoderm. Nat Biotechnol 2005; 23: 1534-1541.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 1534-1541
-
-
D'Amour, K.A.1
Agulnick, A.D.2
Eliazer, S.3
-
22
-
-
79959805164
-
MiRWalk - Database: Prediction of possible miRNA binding sites by "walking" the genes of three genomes
-
Dweep H, Sticht C, Pandey P, et al. miRWalk-Database: Prediction of possible miRNA binding sites by "walking" the genes of three genomes. J Biomed Inform 2011; 44: 839-847.
-
(2011)
J Biomed Inform
, vol.44
, pp. 839-847
-
-
Dweep, H.1
Sticht, C.2
Pandey, P.3
-
23
-
-
48449091318
-
Comprehensive microRNA profiling reveals a unique human embryonic stem cell signature dominated by a single seed sequence
-
Laurent LC, Chen J, Ulitsky I, et al. Comprehensive microRNA profiling reveals a unique human embryonic stem cell signature dominated by a single seed sequence. Stem Cells 2008; 26: 1506-1516.
-
(2008)
Stem Cells
, vol.26
, pp. 1506-1516
-
-
Laurent, L.C.1
Chen, J.2
Ulitsky, I.3
-
24
-
-
2942534403
-
Human embryonic stem cells express a unique set of microRNAs
-
Suh MR, Lee Y, Kim JY, et al. Human embryonic stem cells express a unique set of microRNAs. Dev Biol 2004; 270: 488-498.
-
(2004)
Dev Biol
, vol.270
, pp. 488-498
-
-
Suh, M.R.1
Lee, Y.2
Kim, J.Y.3
-
25
-
-
59449100501
-
The miR-302-367 cluster as a potential stemness regulator in ESCs
-
Barroso-del Jesus A, Lucena-Aguilar G, Menendez P,. The miR-302-367 cluster as a potential stemness regulator in ESCs. Cell Cycle 2009; 8: 394-398.
-
(2009)
Cell Cycle
, vol.8
, pp. 394-398
-
-
Barroso-Del Jesus, A.1
Lucena-Aguilar, G.2
Menendez, P.3
-
26
-
-
79955649501
-
The Nodal inhibitor Lefty is negatively modulated by the microRNA miR-302 in human embryonic stem cells
-
Barroso-delJesus A, Lucena-Aguilar G, Sanchez L, et al. The Nodal inhibitor Lefty is negatively modulated by the microRNA miR-302 in human embryonic stem cells. FASEB J 2011; 25: 1497-1508.
-
(2011)
FASEB J
, vol.25
, pp. 1497-1508
-
-
Barroso-Deljesus, A.1
Lucena-Aguilar, G.2
Sanchez, L.3
-
27
-
-
53549133376
-
Oct4/Sox2-regulated miR-302 targets cyclin D1 in human embryonic stem cells
-
Card DA, Hebbar PB, Li L, et al. Oct4/Sox2-regulated miR-302 targets cyclin D1 in human embryonic stem cells. Mol Cell Biol 2008; 28: 6426-6438.
-
(2008)
Mol Cell Biol
, vol.28
, pp. 6426-6438
-
-
Card, D.A.1
Hebbar, P.B.2
Li, L.3
-
28
-
-
78751640369
-
A regulatory circuitry comprised of miR-302 and the transcription factors OCT4 and NR2F2 regulates human embryonic stem cell differentiation
-
Rosa A, Brivanlou AH,. A regulatory circuitry comprised of miR-302 and the transcription factors OCT4 and NR2F2 regulates human embryonic stem cell differentiation. EMBO J 2011; 30: 237-248.
-
(2011)
EMBO J
, vol.30
, pp. 237-248
-
-
Rosa, A.1
Brivanlou, A.H.2
-
29
-
-
0028807157
-
Forebrain and midbrain regions are deleted in Otx2-/- mutants due to a defective anterior neuroectoderm specification during gastrulation
-
Acampora D, Mazan S, Lallemand Y, et al. Forebrain and midbrain regions are deleted in Otx2-/- mutants due to a defective anterior neuroectoderm specification during gastrulation. Development 1995; 121: 3279-3290.
-
(1995)
Development
, vol.121
, pp. 3279-3290
-
-
Acampora, D.1
Mazan, S.2
Lallemand, Y.3
-
30
-
-
74849135201
-
The tumorigenicity of diploid and aneuploid human pluripotent stem cells
-
Blum B, Benvenisty N,. The tumorigenicity of diploid and aneuploid human pluripotent stem cells. Cell Cycle 2009; 8: 3822-3830.
-
(2009)
Cell Cycle
, vol.8
, pp. 3822-3830
-
-
Blum, B.1
Benvenisty, N.2
-
31
-
-
55049135859
-
MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries
-
Bar M, Wyman SK, Fritz BR, et al. MicroRNA discovery and profiling in human embryonic stem cells by deep sequencing of small RNA libraries. Stem Cells 2008; 26: 2496-2505.
-
(2008)
Stem Cells
, vol.26
, pp. 2496-2505
-
-
Bar, M.1
Wyman, S.K.2
Fritz, B.R.3
-
32
-
-
16444373230
-
Activin A maintains pluripotency of human embryonic stem cells in the absence of feeder layers
-
Beattie GM, Lopez AD, Bucay N, et al. Activin A maintains pluripotency of human embryonic stem cells in the absence of feeder layers. Stem Cells 2005; 23: 489-495.
-
(2005)
Stem Cells
, vol.23
, pp. 489-495
-
-
Beattie, G.M.1
Lopez, A.D.2
Bucay, N.3
-
33
-
-
16244400050
-
TGFbeta/activin/nodal signaling is necessary for the maintenance of pluripotency in human embryonic stem cells
-
James D, Levine AJ, Besser D, et al. TGFbeta/activin/nodal signaling is necessary for the maintenance of pluripotency in human embryonic stem cells. Development 2005; 132: 1273-1282.
-
(2005)
Development
, vol.132
, pp. 1273-1282
-
-
James, D.1
Levine, A.J.2
Besser, D.3
-
34
-
-
73849085104
-
Identification of microRNAs regulated by activin A in human embryonic stem cells
-
Tsai ZY, Singh S, Yu SL, et al. Identification of microRNAs regulated by activin A in human embryonic stem cells. J Cell Biochem 2010; 109: 93-102.
-
(2010)
J Cell Biochem
, vol.109
, pp. 93-102
-
-
Tsai, Z.Y.1
Singh, S.2
Yu, S.L.3
-
35
-
-
78651293534
-
MiRBase: Integrating microRNA annotation and deep-sequencing data
-
(Database issue)
-
Kozomara A, Griffiths-Jones S,. miRBase: Integrating microRNA annotation and deep-sequencing data. Nucleic Acids Res 2011; 39 (Database issue): D152-157.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Kozomara, A.1
Griffiths-Jones, S.2
-
36
-
-
78149332037
-
Complexity of the microRNA repertoire revealed by next-generation sequencing
-
Lee LW, Zhang S, Etheridge A, et al. Complexity of the microRNA repertoire revealed by next-generation sequencing. RNA 2010; 16: 2170-2180.
-
(2010)
RNA
, vol.16
, pp. 2170-2180
-
-
Lee, L.W.1
Zhang, S.2
Etheridge, A.3
-
37
-
-
41649106136
-
Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells
-
Morin RD, O'Connor MD, Griffith M, et al. Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. Genome Res 2008; 18: 610-621.
-
(2008)
Genome Res
, vol.18
, pp. 610-621
-
-
Morin, R.D.1
O'Connor, M.D.2
Griffith, M.3
-
38
-
-
79955501601
-
ID4 imparts chemoresistance and cancer stemness to glioma cells by derepressing miR-9*-mediated suppression of SOX2
-
Jeon HM, Sohn YW, Oh SY, et al. ID4 imparts chemoresistance and cancer stemness to glioma cells by derepressing miR-9*-mediated suppression of SOX2. Cancer Res 2011; 71: 3410-3421.
-
(2011)
Cancer Res
, vol.71
, pp. 3410-3421
-
-
Jeon, H.M.1
Sohn, Y.W.2
Oh, S.Y.3
-
39
-
-
78650843340
-
MiRNAs regulate SIRT1 expression during mouse embryonic stem cell differentiation and in adult mouse tissues
-
(Albany NY)
-
Saunders LR, Sharma AD, Tawney J, et al. miRNAs regulate SIRT1 expression during mouse embryonic stem cell differentiation and in adult mouse tissues. Aging (Albany NY) 2010; 2: 415-431.
-
(2010)
Aging
, vol.2
, pp. 415-431
-
-
Saunders, L.R.1
Sharma, A.D.2
Tawney, J.3
-
41
-
-
34250877841
-
A mammalian microRNA expression atlas based on small RNA library sequencing
-
Landgraf P, Rusu M, Sheridan R, et al. A mammalian microRNA expression atlas based on small RNA library sequencing. Cell 2007; 129: 1401-1414.
-
(2007)
Cell
, vol.129
, pp. 1401-1414
-
-
Landgraf, P.1
Rusu, M.2
Sheridan, R.3
-
42
-
-
38149071979
-
Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
-
Ruby JG, Stark A, Johnston WK, et al. Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs. Genome Res 2007; 17: 1850-1864.
-
(2007)
Genome Res
, vol.17
, pp. 1850-1864
-
-
Ruby, J.G.1
Stark, A.2
Johnston, W.K.3
-
44
-
-
0036546980
-
Neural induction, the default model and embryonic stem cells
-
Munoz-Sanjuan I, Brivanlou AH,. Neural induction, the default model and embryonic stem cells. Nat Rev Neurosci 2002; 3: 271-280.
-
(2002)
Nat Rev Neurosci
, vol.3
, pp. 271-280
-
-
Munoz-Sanjuan, I.1
Brivanlou, A.H.2
-
45
-
-
14244262504
-
Nodal inhibits differentiation of human embryonic stem cells along the neuroectodermal default pathway
-
Vallier L, Reynolds D, Pedersen RA,. Nodal inhibits differentiation of human embryonic stem cells along the neuroectodermal default pathway. Dev Biol 2004; 275: 403-421.
-
(2004)
Dev Biol
, vol.275
, pp. 403-421
-
-
Vallier, L.1
Reynolds, D.2
Pedersen, R.A.3
-
47
-
-
84859778293
-
MTOR signaling in growth control and disease
-
Laplante M, Sabatini DM,. mTOR signaling in growth control and disease. Cell 2012; 149: 274-293.
-
(2012)
Cell
, vol.149
, pp. 274-293
-
-
Laplante, M.1
Sabatini, D.M.2
-
48
-
-
77954945936
-
MTOR-mediated activation of p70 S6K induces differentiation of pluripotent human embryonic stem cells
-
Easley CAT, Ben-Yehudah A, Redinger CJ, et al. mTOR-mediated activation of p70 S6K induces differentiation of pluripotent human embryonic stem cells. Cell Reprogram 2010; 12: 263-273.
-
(2010)
Cell Reprogram
, vol.12
, pp. 263-273
-
-
Easley, C.A.T.1
Ben-Yehudah, A.2
Redinger, C.J.3
|