Proteome analysis of wheat (Triticum aestivum) for the identification of differentially expressed heat-responsive proteins

Australian Journal of Crop Science

Volumn 8, Issue 6, 2014, Pages 973-986

  Kumar, Ranjeet Ranjan ^a   Singh, Gyanendra Pratap ^a   Goswami, Suneha ^a   Pathak, Himanshu ^a   Rai, Raj Deo ^a  

^a INDIAN AGRICULTURAL RESEARCH INSTITUTE   (India)

Author keywords

DEPs; Heat stress; Heat responsive proteins; MALDI TOF; nLC MS MS; Orbitrap; qRT PCR; Transcript; Wheat

Indexed keywords

EID: 84905910118     PISSN: 18352693     EISSN: 18352707     Source Type: Journal    
DOI: None     Document Type: Article

References (28)

1. Abdalla KO, Rafudeen MS (2012) Analysis of the nuclear proteome of the resurrection plant (Xerophyta viscosa) in response to dehydration stress using iTRAQ with 2DLC and tandem mass spectrometry. J Proteomics. 75(8):2361-2374
2. Bazargani MM, Sarhadi E, Bushehri AA, Matros A, Mock HP, Naghavi MR, Hajihoseini V, Mardi M, Hajirezaei MR, Moradi F, Ehdaie B, Salekdeh GH (2011) A proteomics view on the role of drought-induced senescence and oxidative stress defence in enhanced stem reserves remobilization in wheat. J Proteomics. 74(10):1959-1973
3. Boye JI, Achouri A, Raymond N, Cleroux C, Weber D, Koerner TB, Hucl P, Patterson CA (2013) Analysis of glabrous canary seeds by ELISA, mass spectrometry and western blotting for the absence of cross-reactivity with major plant food allergens. J Agric Food Chem. 61(25):6102-6112
4. Bradford M (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem. 72:248-254
5. Dani V, Simon WJ, Duranti M, Croy RR (2005) Changes in the tobacco leaf apoplast proteome in response to salt stress. Proteomics. 5(3):737-745
6. Gammulla CG, Pascovici D, Atwell BJ, Haynes PA (2011) Differential proteomic response of rice (Oryza sativa) leaves exposed to high-and low-temperature stress. Proteomics. 11(14):2839-2850
7. Grigorova B, Vaseva I, Demirevska K, Feller U (2011) Combined drought and heat stress in wheat: changes in some heat shock proteins. Biol Plant. 55(1):105-111
8. Guo G, Ge P, Ma C, Li X, Lv D, Wang S, Ma W, Yan Y (2012) Comparative proteomic analysis of salt response proteins in seedling roots of two wheat varieties. J Proteomics. 75(6):1867-1885
9. Haddad TM, Bancel E, Martre P, Triboi E, Branlard G (2013) Effect of short heat shocks applied during grain development on wheat (Triticum aestivum L.) grain proteome. J Cereal Sci. 57(3):486-495
10. Huerta C, Freire M, Cardemil L (2013) Expression of hsp70, hsp100 and ubiquitin in Aloe barbadensis Miller under direct heat stress and under temperature acclimation conditions. Plant Cell Rep. 32(2):293-307
11. Jagadish SV, Muthurajan R, Oane R, Wheeler TR, Heuer S, Bennett J, Craufurd PQ (2010) Physiological and proteomic approaches to address heat tolerance during anthesis in rice (Oryza sativa L.). J Exp Bot. 61(1):143-156
12. 2 and transcript of heat shock protein. Int J Plant Physiol Biochem. 4(4):83-91
13. Kumar RR, Goswami S, Sharma SK, Singh K, Gadpayle KA, Singh SD, Pathak H, Rai RD (2013a) Differential expression of heat shock protein and alteration in osmolyte accumulation under heat stress in wheat. J Plant Biochem Biotechnol. 22(1):16-26
14. Kumar RR, Sharma SK, Goswami S, Singh GP, Singh R, Singh K, Pathak H, Rai RD (2013b) Characterization of differentially expressed stress-associated proteins in starch granule development under heat stress in wheat (Triticum aestivum L.). Indian J Biochem Biophys. 50(2):126-138
15. Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 227(5259):680-685
16. Laino P, Shelton D, Finnie C, De Leonardis AM, Mastrangelo AM, Svensson B, Lafiandra D, Masci S (2010) Comparative proteome analysis of metabolic proteins from seeds of durum wheat (cv. Svevo) subjected to heat stress. Proteomics. 10(12):2359-2368
17. Li W, Zhang C, Lu Q, Wen X, Lu C (2011) The combined effect of salt stress and heat shock on proteome profiling in Suaeda salsa. J Plant Physiol. 168(15):1743-1752
18. Ling HQ, Zhao S, Liu D, Wang J, Sun H et al. (2013) Draft genome of the wheat A-genome progenitor Triticum urartu. Nature. 496:87-90
19. Liu T, Zhang L, Yuan Z, Hu X, Lu M, Wang W, Wang Y (2013) Identification of proteins regulated by ABA in response to combined drought and heat stress in maize roots. Acta Physiol Plant. 35(2):501-513
20. Majoul T, Bancel E, Triboi E, Ben Hamida J, Branlard G (2004) Proteomic analysis of the effect of heat stress on hexaploid wheat grain: characterization of heat-responsive proteins from non-prolamins fraction. Proteomics. 4(2):505-513
21. Makarov A, Denisov E, Lange O, Horning S (2006) Dynamic range of mass accuracy in LTQ Orbitrap hybrid mass spectrometer. J Am Soc Mass Spectrom. 17(7):977-982
22. Oliveira E, Amara I, Bellido D, Odena MA, Domínguez E, Pages M, Goday A (2007) LC-MSMS identification of Arabidopsis thaliana heat-stable seed proteins: enriching for LEA-type proteins by acid treatment. J Mass Spectrom. 42(11):1485-1495
23. Pfaffl MW, Horgan GW, Dempfle L (2002) Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res. 30(9):e36
24. Rollins JA, Habte E, Templer SE, Colby T, Schmidt J, Von Korff M (2013) Leaf proteome alterations in the context of physiological and morphological responses to drought and heat stress in barley (Hordeum vulgare L.). J Exp Bot. 64(11):3201-3212
25. Sairam RK, Srivastava GC, Saxena DC (2000) Increased antioxidant activity under elevated temperatures: a mechanism of heat stress tolerance in wheat genotypes. Biol Plant. 43(2):245-251
26. Tasleem-Tahir A, Nadaud I, Chambon C, Branlard G (2012) Expression profiling of starchy endosperm metabolic proteins at 21 stages of wheat grain development. J Proteome Res. 11(5):2754-2773
27. Vensel W, Harden L, Tanaka C, Hurkman W, Haddon W (2002) Identification of wheat endosperm proteins by MALDI mass spectrometry and LC-MS/MS. J Biomol Tech. 13(3):95
28. Zou JJ, Wei FJ, Wang C, Wu JJ, Ratnasekera D, Liu WX, Wu WH (2010) Arabidopsis calcium-dependent protein kinase CPK10 functions in abscisic acid-and Ca2+-mediated stomatal regulation in response to drought stress. Plant Physiol. 154(3):1232-1243