-
1
-
-
84868094761
-
Architecture of the nuclease module of the yeast ccr4-not complex: the not1-caf1-ccr4 interaction
-
doi: 10.1016/j.molcel.2012.08.014
-
Basquin, J., Roudko, V. V., Rode, M., Basquin, C., Seraphin, B., and Conti, E. (2012). Architecture of the nuclease module of the yeast ccr4-not complex: the not1-caf1-ccr4 interaction. Mol. Cell 48, 207-218. doi: 10.1016/j.molcel.2012.08.014
-
(2012)
Mol. Cell
, vol.48
, pp. 207-218
-
-
Basquin, J.1
Roudko, V.V.2
Rode, M.3
Basquin, C.4
Seraphin, B.5
Conti, E.6
-
2
-
-
77954314106
-
Assembly, structure, and function of the 26S proteasome
-
doi: 10.1016/j.tcb.2010.03.007
-
Bedford, L., Paine, S., Sheppard, P. W., Mayer, R. J., and Roelofs, J. (2010). Assembly, structure, and function of the 26S proteasome. Trends Cell Biol. 20, 391-401. doi: 10.1016/j.tcb.2010.03.007
-
(2010)
Trends Cell Biol.
, vol.20
, pp. 391-401
-
-
Bedford, L.1
Paine, S.2
Sheppard, P.W.3
Mayer, R.J.4
Roelofs, J.5
-
3
-
-
77957169824
-
Role of a ribosome-associated E3 ubiquitin ligase in protein quality control
-
doi: 10.1038/nature09371
-
Bengtson, M. H., and Joazeiro, C. A. (2010). Role of a ribosome-associated E3 ubiquitin ligase in protein quality control. Nature 467, 470-473. doi: 10.1038/nature09371
-
(2010)
Nature
, vol.467
, pp. 470-473
-
-
Bengtson, M.H.1
Joazeiro, C.A.2
-
4
-
-
84871523350
-
A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress
-
doi: 10.1016/j.cell.2012.10.044
-
Brandman, O., Stewart-Ornstein, J., Wong, D., Larson, A., Williams, C. C., Li, G. W., et al. (2012). A ribosome-bound quality control complex triggers degradation of nascent peptides and signals translation stress. Cell 151, 1042-1054. doi: 10.1016/j.cell.2012.10.044
-
(2012)
Cell
, vol.151
, pp. 1042-1054
-
-
Brandman, O.1
Stewart-Ornstein, J.2
Wong, D.3
Larson, A.4
Williams, C.C.5
Li, G.W.6
-
5
-
-
84871865476
-
Ribosome-associated complex and Ssb are required for translational repression induced by polylysine segments within nascent chains
-
doi: 10.1128/MCB.00809-12
-
Chiabudini, M., Conz, C., Reckmann, F., and Rospert, S. (2012). Ribosome-associated complex and Ssb are required for translational repression induced by polylysine segments within nascent chains. Mol. Cell. Biol. 32, 4769-4779. doi: 10.1128/MCB.00809-12
-
(2012)
Mol. Cell. Biol.
, vol.32
, pp. 4769-4779
-
-
Chiabudini, M.1
Conz, C.2
Reckmann, F.3
Rospert, S.4
-
6
-
-
0032535483
-
The ubiquitin-proteasome pathway: on protein death and cell life
-
doi: 10.1093/emboj/17.24.7151
-
Ciechanover, A. (1998). The ubiquitin-proteasome pathway: on protein death and cell life. EMBO J. 17, 7151-7160. doi: 10.1093/emboj/17.24.7151
-
(1998)
EMBO J.
, vol.17
, pp. 7151-7160
-
-
Ciechanover, A.1
-
7
-
-
0242285769
-
Global control of gene expression in yeast by the Ccr4-Not complex
-
doi: 10.1016/S0378-1119(03)00672-3
-
Collart, M. A. (2003). Global control of gene expression in yeast by the Ccr4-Not complex. Gene 313, 1-16. doi: 10.1016/S0378-1119(03)00672-3
-
(2003)
Gene
, vol.313
, pp. 1-16
-
-
Collart, M.A.1
-
8
-
-
84908317412
-
The NOT4 RING E3 ligase: a relevant player in co-translational quality control
-
548359:19.
-
Collart, M. A. (2013). The NOT4 RING E3 ligase: a relevant player in co-translational quality control. Mol. Biol. 548359:19.
-
(2013)
Mol. Biol
-
-
Collart, M.A.1
-
9
-
-
84155195139
-
The Ccr4 - not complex
-
doi: 10.1016/j.gene.2011.09.033
-
Collart, M. A., and Panasenko, O. O. (2012). The Ccr4 - not complex. Gene 492, 42-53. doi: 10.1016/j.gene.2011.09.033
-
(2012)
Gene
, vol.492
, pp. 42-53
-
-
Collart, M.A.1
Panasenko, O.O.2
-
10
-
-
4143055666
-
The eukaryotic Ccr4-not complex: a regulatory platform integrating mRNA metabolism with cellular signaling pathways?
-
doi: 10.1016/S0079-6603(04)77008-7
-
Collart, M. A., and Timmers, H. T. (2004). The eukaryotic Ccr4-not complex: a regulatory platform integrating mRNA metabolism with cellular signaling pathways? Prog. Nucleic Acid Res. Mol. Biol. 77, 289-322. doi: 10.1016/S0079-6603(04)77008-7
-
(2004)
Prog Nucleic Acid Res. Mol. Biol.
, vol.77
, pp. 289-322
-
-
Collart, M.A.1
Timmers, H.T.2
-
11
-
-
25144482816
-
General translational repression by activators of mRNA decapping
-
doi: 10.1016/j.cell.2005.07.012
-
Coller, J., and Parker, R. (2005). General translational repression by activators of mRNA decapping. Cell 122, 875-886. doi: 10.1016/j.cell.2005.07.012
-
(2005)
Cell
, vol.122
, pp. 875-886
-
-
Coller, J.1
Parker, R.2
-
12
-
-
84875481864
-
Cdc48-associated complex bound to 60S particles is required for the clearance of aberrant translation products
-
doi: 10.1073/pnas.1221724110
-
Defenouillere, Q., Yao, Y., Mouaikel, J., Namane, A., Galopier, A., Decourty, L., et al. (2013). Cdc48-associated complex bound to 60S particles is required for the clearance of aberrant translation products. Proc. Natl. Acad. Sci. U.S.A. 110, 5046-5051. doi: 10.1073/pnas.1221724110
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 5046-5051
-
-
Defenouillere, Q.1
Yao, Y.2
Mouaikel, J.3
Namane, A.4
Galopier, A.5
Decourty, L.6
-
13
-
-
66849136862
-
Nascent peptide-dependent translation arrest leads to Not4p-mediated protein degradation by the proteasome
-
doi: 10.1074/jbc.M808840200
-
Dimitrova, L. N., Kuroha, K., Tatematsu, T., and Inada, T. (2009). Nascent peptide-dependent translation arrest leads to Not4p-mediated protein degradation by the proteasome. J. Biol. Chem. 284, 10343-10352. doi: 10.1074/jbc.M808840200
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 10343-10352
-
-
Dimitrova, L.N.1
Kuroha, K.2
Tatematsu, T.3
Inada, T.4
-
14
-
-
84883210213
-
Principles of cotranslational ubiquitination and quality control at the ribosome
-
doi: 10.1016/j.molcel.2013.03.010
-
Duttler, S., Pechmann, S., and Frydman, J. (2013). Principles of cotranslational ubiquitination and quality control at the ribosome. Mol. Cell 50, 379-393. doi: 10.1016/j.molcel.2013.03.010
-
(2013)
Mol. Cell
, vol.50
, pp. 379-393
-
-
Duttler, S.1
Pechmann, S.2
Frydman, J.3
-
15
-
-
84867176120
-
The ubiquitin-proteasome system of Saccharomyces cerevisiae
-
doi: 10.1534/genetics.112.140467
-
Finley, D., Ulrich, H. D., Sommer, T., and Kaiser, P. (2012). The ubiquitin-proteasome system of Saccharomyces cerevisiae. Genetics 192, 319-360. doi: 10.1534/genetics.112.140467
-
(2012)
Genetics
, vol.192
, pp. 319-360
-
-
Finley, D.1
Ulrich, H.D.2
Sommer, T.3
Kaiser, P.4
-
16
-
-
0346727127
-
Protein degradation and protection against misfolded or damaged proteins
-
doi: 10.1038/nature02263
-
Goldberg, A. L. (2003). Protein degradation and protection against misfolded or damaged proteins. Nature 426, 895-899. doi: 10.1038/nature02263
-
(2003)
Nature
, vol.426
, pp. 895-899
-
-
Goldberg, A.L.1
-
17
-
-
84898429935
-
The Not4 E3 ligase and CCR4 deadenylase play distinct roles in protein quality control
-
doi: 10.1371/journal.pone.0086218
-
Halter, D., Collart, M. A., and Panasenko, O. O. (2014). The Not4 E3 ligase and CCR4 deadenylase play distinct roles in protein quality control. PLoS ONE 9:e86218. doi: 10.1371/journal.pone.0086218
-
(2014)
PLoS ONE
, vol.9
-
-
Halter, D.1
Collart, M.A.2
Panasenko, O.O.3
-
18
-
-
33748754298
-
Rapid ATP-dependent deadenylation of nanos mRNA in a cell-free system from Drosophila embryos
-
doi: 10.1074/jbc.M604802200
-
Jeske, M., Meyer, S., Temme, C., Freudenreich, D., and Wahle, E. (2006). Rapid ATP-dependent deadenylation of nanos mRNA in a cell-free system from Drosophila embryos. J. Biol. Chem. 281, 25124-25133. doi: 10.1074/jbc.M604802200
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 25124-25133
-
-
Jeske, M.1
Meyer, S.2
Temme, C.3
Freudenreich, D.4
Wahle, E.5
-
19
-
-
84876916040
-
Structural biology of the proteasome
-
doi: 10.1146/annurev-biophys-083012-130417
-
Kish-Trier, E., and Hill, C. P. (2013). Structural biology of the proteasome. Annu. Rev. Biophys. 42, 29-49. doi: 10.1146/annurev-biophys-083012-130417
-
(2013)
Annu. Rev. Biophys.
, vol.42
, pp. 29-49
-
-
Kish-Trier, E.1
Hill, C.P.2
-
20
-
-
78649472341
-
Receptor for activated C kinase 1 stimulates nascent polypeptide-dependent translation arrest
-
doi: 10.1038/embor.2010.169
-
Kuroha, K., Akamatsu, M., Dimitrova, L., Ito, T., Kato, Y., Shirahige, K., et al. (2010). Receptor for activated C kinase 1 stimulates nascent polypeptide-dependent translation arrest. EMBO Rep. 11, 956-961. doi: 10.1038/embor.2010.169
-
(2010)
EMBO Rep.
, vol.11
, pp. 956-961
-
-
Kuroha, K.1
Akamatsu, M.2
Dimitrova, L.3
Ito, T.4
Kato, Y.5
Shirahige, K.6
-
21
-
-
70249110072
-
Human Ccr4-Not complexes contain variable deadenylase subunits
-
doi: 10.1042/BJ20090500
-
Lau, N. C., Kolkman, A., Van Schaik, F. M., Mulder, K. W., Pijnappel, W. W., Heck, A. J., et al. (2009). Human Ccr4-Not complexes contain variable deadenylase subunits. Biochem. J. 422, 443-453. doi: 10.1042/BJ20090500
-
(2009)
Biochem. J.
, vol.422
, pp. 443-453
-
-
Lau, N.C.1
Kolkman, A.2
Van Schaik, F.M.3
Mulder, K.W.4
Pijnappel, W.W.5
Heck, A.J.6
-
22
-
-
84894085209
-
Quality control: protecting the proteome: eukaryotic cotranslational quality control pathways
-
doi: 10.1083/jcb.201311103
-
Lykke-Andersen, J., and Bennett, E. J. (2014). Quality control: protecting the proteome: eukaryotic cotranslational quality control pathways. J. Cell Biol. 204, 467-476. doi: 10.1083/jcb.201311103
-
(2014)
J. Cell Biol.
, vol.204
, pp. 467-476
-
-
Lykke-Andersen, J.1
Bennett, E.J.2
-
23
-
-
0037169544
-
Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase
-
doi: 10.1074/jbc.M107979200
-
Maillet, L., and Collart, M. A. (2002). Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase. J. Biol. Chem. 277, 2835-2842. doi: 10.1074/jbc.M107979200
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 2835-2842
-
-
Maillet, L.1
Collart, M.A.2
-
24
-
-
84891145553
-
Protein quality control systems associated with no-go and nonstop mRNA surveillance in yeast
-
doi: 10.1111/gtc.12106
-
Matsuda, R., Ikeuchi, K., Nomura, S., and Inada, T. (2014). Protein quality control systems associated with no-go and nonstop mRNA surveillance in yeast. Genes Cells 19, 1-12. doi: 10.1111/gtc.12106
-
(2014)
Genes Cells
, vol.19
, pp. 1-12
-
-
Matsuda, R.1
Ikeuchi, K.2
Nomura, S.3
Inada, T.4
-
25
-
-
84862685172
-
Ccr4-Not complex: the control freak of eukaryotic cells
-
doi: 10.3109/10409238.2012.667214
-
Miller, J. E., and Reese, J. C. (2012). Ccr4-Not complex: the control freak of eukaryotic cells. Crit. Rev. Biochem. Mol. Biol. 47, 315-333. doi: 10.3109/10409238.2012.667214
-
(2012)
Crit. Rev. Biochem. Mol. Biol.
, vol.47
, pp. 315-333
-
-
Miller, J.E.1
Reese, J.C.2
-
26
-
-
33846008044
-
The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex
-
doi: 10.1074/jbc.M604986200
-
Panasenko, O., Landrieux, E., Feuermann, M., Finka, A., Paquet, N., and Collart, M. A. (2006). The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex. J. Biol. Chem. 281, 31389-31398. doi: 10.1074/jbc.M604986200
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 31389-31398
-
-
Panasenko, O.1
Landrieux, E.2
Feuermann, M.3
Finka, A.4
Paquet, N.5
Collart, M.A.6
-
27
-
-
79953150421
-
Not4 E3 Ligase Contributes to Proteasome Assembly and Functional Integrity in Part through Ecm29
-
doi: 10.1128/MCB.01210-10
-
Panasenko, O. O., and Collart, M. A. (2011). Not4 E3 Ligase Contributes to Proteasome Assembly and Functional Integrity in Part through Ecm29. Mol. Cell. Biol. 31, 1610-1623. doi: 10.1128/MCB.01210-10
-
(2011)
Mol. Cell. Biol.
, vol.31
, pp. 1610-1623
-
-
Panasenko, O.O.1
Collart, M.A.2
-
28
-
-
84856026751
-
Presence of Not5 and ubiquitinated Rps7A in polysome fractions depends upon the Not4 E3 ligase
-
doi: 10.1111/j.1365-2958.2011.07957.x
-
Panasenko, O. O., and Collart, M. A. (2012). Presence of Not5 and ubiquitinated Rps7A in polysome fractions depends upon the Not4 E3 ligase. Mol. Microbiol. 83, 640-653. doi: 10.1111/j.1365-2958.2011.07957.x
-
(2012)
Mol. Microbiol.
, vol.83
, pp. 640-653
-
-
Panasenko, O.O.1
Collart, M.A.2
-
29
-
-
62449339168
-
Ribosome association and stability of the nascent polypeptide-associated complex is dependent upon its own ubiquitination
-
doi: 10.1534/genetics.108.095422
-
Panasenko, O. O., David, F. P., and Collart, M. A. (2009). Ribosome association and stability of the nascent polypeptide-associated complex is dependent upon its own ubiquitination. Genetics 181, 447-460. doi: 10.1534/genetics.108.095422
-
(2009)
Genetics
, vol.181
, pp. 447-460
-
-
Panasenko, O.O.1
David, F.P.2
Collart, M.A.3
-
30
-
-
84863869059
-
RNA degradation in Saccharomyces cerevisae
-
doi: 10.1534/genetics.111.137265
-
Parker, R. (2012). RNA degradation in Saccharomyces cerevisae. Genetics 191, 671-702. doi: 10.1534/genetics.111.137265
-
(2012)
Genetics
, vol.191
, pp. 671-702
-
-
Parker, R.1
-
31
-
-
33644872508
-
Characterization of rapidly degraded polypeptides in mammalian cells reveals a novel layer of nascent protein quality control
-
doi: 10.1074/jbc.M509126200
-
Qian, S. B., Princiotta, M. F., Bennink, J. R., and Yewdell, J. W. (2006). Characterization of rapidly degraded polypeptides in mammalian cells reveals a novel layer of nascent protein quality control. J. Biol. Chem. 281, 392-400. doi: 10.1074/jbc.M509126200
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 392-400
-
-
Qian, S.B.1
Princiotta, M.F.2
Bennink, J.R.3
Yewdell, J.W.4
-
32
-
-
0034643336
-
Rapid degradation of a large fraction of newly synthesized proteins by proteasomes
-
doi: 10.1038/35008096
-
Schubert, U., Anton, L. C., Gibbs, J., Norbury, C. C., Yewdell, J. W., and Bennink, J. R. (2000). Rapid degradation of a large fraction of newly synthesized proteins by proteasomes. Nature 404, 770-774. doi: 10.1038/35008096
-
(2000)
Nature
, vol.404
, pp. 770-774
-
-
Schubert, U.1
Anton, L.C.2
Gibbs, J.3
Norbury, C.C.4
Yewdell, J.W.5
Bennink, J.R.6
-
33
-
-
84873442839
-
Widespread regulation of translation by elongation pausing in heat shock
-
doi: 10.1016/j.molcel.2012.11.028
-
Shalgi, R., Hurt, J. A., Krykbaeva, I., Taipale, M., Lindquist, S., and Burge, C. B. (2013). Widespread regulation of translation by elongation pausing in heat shock. Mol. Cell 49, 439-452. doi: 10.1016/j.molcel.2012.11.028
-
(2013)
Mol. Cell
, vol.49
, pp. 439-452
-
-
Shalgi, R.1
Hurt, J.A.2
Krykbaeva, I.3
Taipale, M.4
Lindquist, S.5
Burge, C.B.6
-
34
-
-
84878857004
-
Listerin-dependent nascent protein ubiquitination relies on ribosome subunit dissociation
-
doi: 10.1016/j.molcel.2013.04.015
-
Shao, S., Von Der Malsburg, K., and Hegde, R. S. (2013). Listerin-dependent nascent protein ubiquitination relies on ribosome subunit dissociation. Mol. Cell 50, 637-648. doi: 10.1016/j.molcel.2013.04.015
-
(2013)
Mol. Cell
, vol.50
, pp. 637-648
-
-
Shao, S.1
Von Der Malsburg, K.2
Hegde, R.S.3
-
35
-
-
84861841297
-
Translation drives mRNA quality control
-
doi: 10.1038/nsmb.2301
-
Shoemaker, C. J., and Green, R. (2012). Translation drives mRNA quality control. Nat. Struct. Mol. Biol. 19, 594-601. doi: 10.1038/nsmb.2301
-
(2012)
Nat. Struct. Mol. Biol.
, vol.19
, pp. 594-601
-
-
Shoemaker, C.J.1
Green, R.2
-
36
-
-
84863688029
-
The DEAD-box protein Dhh1 promotes decapping by slowing ribosome movement
-
doi: 10.1371/journal.pbio.1001342
-
Sweet, T., Kovalak, C., and Coller, J. (2012). The DEAD-box protein Dhh1 promotes decapping by slowing ribosome movement. PLoS Biol. 10:e1001342. doi: 10.1371/journal.pbio.1001342
-
(2012)
PLoS Biol
, vol.10
-
-
Sweet, T.1
Kovalak, C.2
Coller, J.3
-
37
-
-
0034703437
-
Detecting and measuring cotranslational protein degradation in vivo
-
doi: 10.1126/science.289.5487.2117
-
Turner, G. C., and Varshavsky, A. (2000). Detecting and measuring cotranslational protein degradation in vivo. Science 289, 2117-2120. doi: 10.1126/science.289.5487.2117
-
(2000)
Science
, vol.289
, pp. 2117-2120
-
-
Turner, G.C.1
Varshavsky, A.2
-
38
-
-
84883229070
-
A cotranslational ubiquitination pathway for quality control of misfolded proteins
-
doi: 10.1016/j.molcel.2013.03.009
-
Wang, F., Durfee, L. A., and Huibregtse, J. M. (2013). A cotranslational ubiquitination pathway for quality control of misfolded proteins. Mol. Cell 50, 368-378. doi: 10.1016/j.molcel.2013.03.009
-
(2013)
Mol. Cell
, vol.50
, pp. 368-378
-
-
Wang, F.1
Durfee, L.A.2
Huibregtse, J.M.3
-
39
-
-
35548981256
-
A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism
-
doi: 10.1534/genetics.107.073205
-
Wilson, M. A., Meaux, S., and Van Hoof, A. (2007). A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism. Genetics 177, 773-784. doi: 10.1534/genetics.107.073205
-
(2007)
Genetics
, vol.177
, pp. 773-784
-
-
Wilson, M.A.1
Meaux, S.2
Van Hoof, A.3
-
40
-
-
84865238560
-
NAC functions as a modulator of SRP during the early steps of protein targeting to the endoplasmic reticulum
-
doi: 10.1091/mbc.E12-02-0112
-
Zhang, Y., Berndt, U., Golz, H., Tais, A., Oellerer, S., Wolfle, T., et al. (2012). NAC functions as a modulator of SRP during the early steps of protein targeting to the endoplasmic reticulum. Mol. Biol. Cell 23, 3027-3040. doi: 10.1091/mbc.E12-02-0112
-
(2012)
Mol. Biol. Cell
, vol.23
, pp. 3027-3040
-
-
Zhang, Y.1
Berndt, U.2
Golz, H.3
Tais, A.4
Oellerer, S.5
Wolfle, T.6
|