-
1
-
-
84868129312
-
HIV-1 dynamics: A reappraisal of host and viral factors, as well as methodological issues
-
Prentice HA, Tang J. HIV-1 dynamics: a reappraisal of host and viral factors, as well as methodological issues. Viruses 2012; 4: 2080-2096.
-
(2012)
Viruses
, vol.4
, pp. 2080-2096
-
-
Prentice, H.A.1
Tang, J.2
-
2
-
-
79959352468
-
What did we learn on host's genetics by studying large cohorts of HIV-1-infected patients in the genome-wide association era
-
Guergnon J, Theodorou I. What did we learn on host's genetics by studying large cohorts of HIV-1-infected patients in the genome-wide association era? Curr Opin HIV AIDS 2011; 6: 290-296.
-
(2011)
Curr Opin HIV AIDS
, vol.6
, pp. 290-296
-
-
Guergnon, J.1
Theodorou, I.2
-
3
-
-
79952699573
-
The search for host genetic factors of HIV/AIDS pathogenesis in the post-genome era: Progress to date and new avenues for discovery
-
Aouizerat BE, Pearce CL, Miaskowski C. The search for host genetic factors of HIV/AIDS pathogenesis in the post-genome era: progress to date and new avenues for discovery. Curr HIV/AIDS Rep 2011; 8: 38-44.
-
(2011)
Curr HIV/AIDS Rep
, vol.8
, pp. 38-44
-
-
Aouizerat, B.E.1
Pearce, C.L.2
Miaskowski, C.3
-
4
-
-
34548134145
-
A whole-genome association study of major determinants for host control of HIV-1
-
Fellay J, Shianna KV, Ge D, Colombo S, Ledergerber B, Weale M et al. A whole-genome association study of major determinants for host control of HIV-1. Science 2007; 317: 944-947.
-
(2007)
Science
, vol.317
, pp. 944-947
-
-
Fellay, J.1
Shianna, K.V.2
Ge, D.3
Colombo, S.4
Ledergerber, B.5
Weale, M.6
-
5
-
-
58149203242
-
Distinct genetic loci control plasma HIV-RNA and cellular HIV-DNA levels in HIV-1 infection: The ANRS Genome Wide Association 01 study
-
Dalmasso C, Carpentier W, Meyer L, Rouzioux C, Goujard C, Chaix ML et al. Distinct genetic loci control plasma HIV-RNA and cellular HIV-DNA levels in HIV-1 infection: the ANRS Genome Wide Association 01 study. PLoS ONE 2008; 3: e3907.
-
(2008)
PLoS ONE
, vol.3
-
-
Dalmasso, C.1
Carpentier, W.2
Meyer, L.3
Rouzioux, C.4
Goujard, C.5
Chaix, M.L.6
-
6
-
-
58849125366
-
Gen-omewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02)
-
Limou S, Le Clerc S, Coulonges C, Carpentier W, Dina C, Delaneau O et al. Gen-omewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02). J Infect Dis 2009; 199: 419-426.
-
(2009)
J Infect Dis
, vol.199
, pp. 419-426
-
-
Limou, S.1
Le Clerc, S.2
Coulonges, C.3
Carpentier, W.4
Dina, C.5
Delaneau, O.6
-
7
-
-
70349427182
-
Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03)
-
Le Clerc S, Limou S, Coulonges C, Carpentier W, Dina C, Taing L et al. Genomewide association study of a rapid progression cohort identifies new susceptibility alleles for AIDS (ANRS Genomewide Association Study 03). J Infect Dis 2009; 200: 1194-1201.
-
(2009)
J Infect Dis
, vol.200
, pp. 1194-1201
-
-
Le Clerc, S.1
Limou, S.2
Coulonges, C.3
Carpentier, W.4
Dina, C.5
Taing, L.6
-
8
-
-
74249086566
-
Common genetic variation and the control of HIV-1 in humans
-
Fellay J, Ge D, Shianna KV, Colombo S, Ledergerber B, Cirulli ET et al. Common genetic variation and the control of HIV-1 in humans. PLoS Genet 2009; 5: e1000791.
-
(2009)
PLoS Genet
, vol.5
-
-
Fellay, J.1
Ge, D.2
Shianna, K.V.3
Colombo, S.4
Ledergerber, B.5
Cirulli, E.T.6
-
9
-
-
75749117111
-
Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS
-
Herbeck JT, Gottlieb GS, Winkler CA, Nelson GW, An P, Maust BS et al. Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS. J Infect Dis 2010; 201: 618-626.
-
(2010)
J Infect Dis
, vol.201
, pp. 618-626
-
-
Herbeck, J.T.1
Gottlieb, G.S.2
Winkler, C.A.3
Nelson, G.W.4
An, P.5
Maust, B.S.6
-
10
-
-
77950229250
-
Host determinants of HIV-1 control in African Americans
-
Pelak K, Goldstein DB, Walley NM, Fellay J, Ge D, Shianna KV et al. Host determinants of HIV-1 control in African Americans. J Infect Dis 2010; 201: 1141-1149.
-
(2010)
J Infect Dis
, vol.201
, pp. 1141-1149
-
-
Pelak, K.1
Goldstein, D.B.2
Walley, N.M.3
Fellay, J.4
Ge, D.5
Shianna, K.V.6
-
11
-
-
78650084232
-
The major genetic determinants of HIV-1 control affect HLA class i peptide presentation
-
Pereyra F, Jia X, McLaren PJ, Telenti A, de Bakker PI, Walker BD et al. The major genetic determinants of HIV-1 control affect HLA class I peptide presentation. Science 2010; 330: 1551-1557.
-
(2010)
Science
, vol.330
, pp. 1551-1557
-
-
Pereyra, F.1
Jia, X.2
McLaren, P.J.3
Telenti, A.4
De Bakker, P.I.5
Walker, B.D.6
-
12
-
-
84887377784
-
A genome-to-genome analysis of associations between human genetic variation
-
Bartha I, Carlson JM, Brumme CJ, McLaren PJ, Brumme ZL, John M et al. A genome-to-genome analysis of associations between human genetic variation, HIV-1 sequence diversity, and viral control. Elife 2013; 2: e01123.
-
(2013)
HIV-1 Sequence Diversity, and Viral Control. Elife
, vol.2
-
-
Bartha, I.1
Carlson, J.M.2
Brumme, C.J.3
McLaren, P.J.4
Brumme, Z.L.5
John, M.6
-
13
-
-
57449109452
-
HIV-1 disease-influencing effects associated with ZNRD1
-
Catano G, Kulkarni H, He W, Marconi VC, Agan BK, Landrum M et al. HIV-1 disease-influencing effects associated with ZNRD1, HCP5 and HLA-C alleles are attributable mainly to either HLA-A10 or HLA-B*57 alleles. PLoS ONE 2008; 3: e3636.
-
(2008)
HCP5 and HLA-C Alleles Are Attributable Mainly to Either HLA-A10 or HLA-B*57 Alleles. PLoS ONE
, vol.3
-
-
Catano, G.1
Kulkarni, H.2
He, W.3
Marconi, V.C.4
Agan, B.K.5
Landrum, M.6
-
14
-
-
64549104262
-
Host genetics and HIV-1 viral load set-point in African-Americans
-
Shrestha S, Aissani B, Song W, Wilson CM, Kaslow RA, Tang J. Host genetics and HIV-1 viral load set-point in African-Americans. AIDS 2009; 23: 673-677.
-
(2009)
AIDS
, vol.23
, pp. 673-677
-
-
Shrestha, S.1
Aissani, B.2
Song, W.3
Wilson, C.M.4
Kaslow, R.A.5
Tang, J.6
-
15
-
-
84857190262
-
Human genetic susceptibility to infectious disease
-
Chapman SJ, Hill AV. Human genetic susceptibility to infectious disease. Nat Rev Genet 2012; 13: 175-188.
-
(2012)
Nat Rev Genet
, vol.13
, pp. 175-188
-
-
Chapman, S.J.1
Hill, A.V.2
-
16
-
-
33846221986
-
Human susceptibility to viral infection: The search for HIV-protective alleles among Africans by means of genome-wide studies
-
Donfack J, Buchinsky FJ, Post JC, Ehrlich GD. Human susceptibility to viral infection: the search for HIV-protective alleles among Africans by means of genome-wide studies. AIDS Res Hum Retroviruses 2006; 22: 925-930.
-
(2006)
AIDS Res Hum Retroviruses
, vol.22
, pp. 925-930
-
-
Donfack, J.1
Buchinsky, F.J.2
Post, J.C.3
Ehrlich, G.D.4
-
17
-
-
84866429162
-
Fine-mapping classical HLA variation associated with durable host control of HIV-1 infection in African Americans
-
McLaren PJ, Ripke S, Pelak K, Weintrob AC, Patsopoulos NA, Jia X et al. Fine-mapping classical HLA variation associated with durable host control of HIV-1 infection in African Americans. Hum Mol Genet 2012; 21: 4334-4347.
-
(2012)
Hum Mol Genet
, vol.21
, pp. 4334-4347
-
-
McLaren, P.J.1
Ripke, S.2
Pelak, K.3
Weintrob, A.C.4
Patsopoulos, N.A.5
Jia, X.6
-
18
-
-
0036318823
-
Favorable and unfavorable HLA class i alleles and haplotypes in Zambians predominantly infected with clade C human immunodeficiency virus type 1
-
Tang J, Tang S, Lobashevsky E, Myracle AD, Fideli U, Aldrovandi G et al. Favorable and unfavorable HLA class I alleles and haplotypes in Zambians predominantly infected with clade C human immunodeficiency virus type 1. J Virol 2002; 76: 8276-8284.
-
(2002)
J Virol
, vol.76
, pp. 8276-8284
-
-
Tang, J.1
Tang, S.2
Lobashevsky, E.3
Myracle, A.D.4
Fideli, U.5
Aldrovandi, G.6
-
19
-
-
0742325052
-
HLA allele sharing and HIV type 1 viremia in seroconverting Zambians with known transmitting partners
-
Tang J, Tang S, Lobashevsky E, Zulu I, Aldrovandi G, Allen S et al. HLA allele sharing and HIV type 1 viremia in seroconverting Zambians with known transmitting partners. AIDS Res Hum Retroviruses 2004; 20: 19-25.
-
(2004)
AIDS Res Hum Retroviruses
, vol.20
, pp. 19-25
-
-
Tang, J.1
Tang, S.2
Lobashevsky, E.3
Zulu, I.4
Aldrovandi, G.5
Allen, S.6
-
20
-
-
33744930848
-
Human leukocyte antigen B58 supertype and human immunodeficiency virus type 1 infection in native Africans
-
Lazaryan A, Lobashevsky E, Mulenga J, Karita E, Allen S, Tang J et al. Human leukocyte antigen B58 supertype and human immunodeficiency virus type 1 infection in native Africans. J Virol 2006; 80: 6056-6060.
-
(2006)
J Virol
, vol.80
, pp. 6056-6060
-
-
Lazaryan, A.1
Lobashevsky, E.2
Mulenga, J.3
Karita, E.4
Allen, S.5
Tang, J.6
-
21
-
-
77949808391
-
Human leukocyte antigens and HIV type 1 viral load in early and chronic infection: Predominance of evolving relationships
-
Tang J, Malhotra R, Song W, Brill I, Hu L, Farmer PK et al. Human leukocyte antigens and HIV type 1 viral load in early and chronic infection: predominance of evolving relationships. PLoS ONE 2010; 5: e9629.
-
(2010)
PLoS ONE
, vol.5
-
-
Tang, J.1
Malhotra, R.2
Song, W.3
Brill, I.4
Hu, L.5
Farmer, P.K.6
-
22
-
-
84871983347
-
Cumulative impact of host and viral factors on HIV-1 viral-load control during early infection
-
Yue L, Prentice HA, Farmer P, Song W, He D, Lakhi S et al. Cumulative impact of host and viral factors on HIV-1 viral-load control during early infection. J Virol 2012; 87: 708-715.
-
(2012)
J Virol
, vol.87
, pp. 708-715
-
-
Yue, L.1
Prentice, H.A.2
Farmer, P.3
Song, W.4
He, D.5
Lakhi, S.6
-
23
-
-
80052285180
-
Human leukocyte antigen variants B*44 and B*57 are consistently favorable during two distinct phases of primary HIV-1 infection in sub-Saharan Africans with several viral subtypes
-
Tang J, Cormier E, Gilmour J, Price MA, Prentice HA, Song W et al. Human leukocyte antigen variants B*44 and B*57 are consistently favorable during two distinct phases of primary HIV-1 infection in sub-Saharan Africans with several viral subtypes. J Virol 2011; 85: 8894-8902.
-
(2011)
J Virol
, vol.85
, pp. 8894-8902
-
-
Tang, J.1
Cormier, E.2
Gilmour, J.3
Price, M.A.4
Prentice, H.A.5
Song, W.6
-
24
-
-
78651385721
-
The hypervariable HIV-1 capsid protein residues comprise HLA-driven CD8 + T-cell escape mutations and covarying HLA-independent polymorphisms
-
Crawford H, Matthews PC, Schaefer M, Carlson JM, Leslie A, Kilembe W et al. The hypervariable HIV-1 capsid protein residues comprise HLA-driven CD8 + T-cell escape mutations and covarying HLA-independent polymorphisms. J Virol 2011; 85: 1384-1390.
-
(2011)
J Virol
, vol.85
, pp. 1384-1390
-
-
Crawford, H.1
Matthews, P.C.2
Schaefer, M.3
Carlson, J.M.4
Leslie, A.5
Kilembe, W.6
-
25
-
-
84860317030
-
Genetics of gene expression in primary immune cells identifies cell type-specific master regulators and roles of HLA alleles
-
Fairfax BP, Makino S, Radhakrishnan J, Plant K, Leslie S, Dilthey A et al. Genetics of gene expression in primary immune cells identifies cell type-specific master regulators and roles of HLA alleles. Nat Genet 2012; 44: 502-510.
-
(2012)
Nat Genet
, vol.44
, pp. 502-510
-
-
Fairfax, B.P.1
Makino, S.2
Radhakrishnan, J.3
Plant, K.4
Leslie, S.5
Dilthey, A.6
-
26
-
-
58249099949
-
Identification of a novel susceptibility locus for juvenile idiopathic arthritis by genome-wide association analysis
-
Hinks A, Barton A, Shephard N, Eyre S, Bowes J, Cargill M et al. Identification of a novel susceptibility locus for juvenile idiopathic arthritis by genome-wide association analysis. Arthritis Rheum 2009; 60: 258-263.
-
(2009)
Arthritis Rheum
, vol.60
, pp. 258-263
-
-
Hinks, A.1
Barton, A.2
Shephard, N.3
Eyre, S.4
Bowes, J.5
Cargill, M.6
-
27
-
-
0037165969
-
Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level
-
Moore CB, John M, James IR, Christiansen FT, Witt CS, Mallal S. Evidence of HIV-1 adaptation to HLA-restricted immune responses at a population level. Science 2002; 296: 1439-1443.
-
(2002)
Science
, vol.296
, pp. 1439-1443
-
-
Moore, C.B.1
John, M.2
James, I.R.3
Christiansen, F.T.4
Witt, C.S.5
Mallal, S.6
-
28
-
-
63949087100
-
Adaptation of HIV-1 to human leukocyte antigen class i
-
Kawashima Y, Pfafferott K, Frater J, Matthews P, Payne R, Addo M et al. Adaptation of HIV-1 to human leukocyte antigen class I. Nature 2009; 458: 641-645.
-
(2009)
Nature
, vol.458
, pp. 641-645
-
-
Kawashima, Y.1
Pfafferott, K.2
Frater, J.3
Matthews, P.4
Payne, R.5
Addo, M.6
-
29
-
-
84875509979
-
HLA-B*57 versus HLA-B*81 in HIV-1 infection: Slow and steady wins the race
-
Prentice HA, Porter TR, Price MA, Cormier E, He D, Farmer PK et al. HLA-B*57 versus HLA-B*81 in HIV-1 infection: slow and steady wins the race? J Virol 2013; 87: 4043-4051.
-
(2013)
J Virol
, vol.87
, pp. 4043-4051
-
-
Prentice, H.A.1
Porter, T.R.2
Price, M.A.3
Cormier, E.4
He, D.5
Farmer, P.K.6
-
30
-
-
78649523088
-
SNP selection in genome-wide and candidate gene studies via penalized logistic regression
-
Ayers KL, Cordell HJ. SNP selection in genome-wide and candidate gene studies via penalized logistic regression. Genet Epidemiol 2010; 34: 879-891.
-
(2010)
Genet Epidemiol
, vol.34
, pp. 879-891
-
-
Ayers, K.L.1
Cordell, H.J.2
-
31
-
-
48249096806
-
Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies
-
Hoggart CJ, Whittaker JC, De Iorio M, Balding DJ. Simultaneous analysis of all SNPs in genome-wide and re-sequencing association studies. PLoS Genet 2008; 4: e1000130.
-
(2008)
PLoS Genet
, vol.4
-
-
Hoggart, C.J.1
Whittaker, J.C.2
De Iorio, M.3
Balding, D.J.4
-
32
-
-
77952586314
-
The 1000 Genomes Project: New opportunities for research and social challenges
-
Via M, Gignoux C, Burchard EG. The 1000 Genomes Project: new opportunities for research and social challenges. Genome Med 2010; 2: 3.
-
(2010)
Genome Med
, vol.2
, pp. 3
-
-
Via, M.1
Gignoux, C.2
Burchard, E.G.3
-
33
-
-
75549091651
-
ENCODE whole-genome data in the UCSC Genome Browser
-
(Database issue)
-
Rosenbloom KR, Dreszer TR, Pheasant M, Barber GP, Meyer LR, Pohl A et al. ENCODE whole-genome data in the UCSC Genome Browser. Nucleic Acids Res 2010; 38(Database issue): D620-D625.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Rosenbloom, K.R.1
Dreszer, T.R.2
Pheasant, M.3
Barber, G.P.4
Meyer, L.R.5
Pohl, A.6
-
34
-
-
84865790047
-
An integrated encyclopedia of DNA elements in the human genome
-
Bernstein BE, Birney E, Dunham I, Green ED, Gunter C et al. An integrated encyclopedia of DNA elements in the human genome. Nature 2012; 489: 57-74.
-
(2012)
Nature
, vol.489
, pp. 57-74
-
-
Bernstein, B.E.1
Birney, E.2
Dunham, I.3
Green, E.D.4
Gunter, C.5
-
35
-
-
79951811670
-
Screening low-frequency SNPS from genome-wide association study reveals a new risk allele for progression to AIDS
-
Le Clerc S, Coulonges C, Delaneau O, Van Manen D, Herbeck JT, Limou S et al. Screening low-frequency SNPS from genome-wide association study reveals a new risk allele for progression to AIDS. J Acquir Immune Defic Syndr 2011; 56: 279-284.
-
(2011)
J Acquir Immune Defic Syndr
, vol.56
, pp. 279-284
-
-
Le Clerc, S.1
Coulonges, C.2
Delaneau, O.3
Van Manen, D.4
Herbeck, J.T.5
Limou, S.6
-
36
-
-
58549107002
-
MHC fine mapping of human type 1 diabetes using the T1DGC data
-
He C, Hamon S, Li D, Barral-Rodriguez S, Ott J. Diabetes Genetics Consortium. MHC fine mapping of human type 1 diabetes using the T1DGC data. Diabetes Obes Metab 2009; 11(Suppl 1): 53-59.
-
(2009)
Diabetes Obes Metab
, vol.11
, Issue.SUPPL. 1
, pp. 53-59
-
-
He, C.1
Hamon, S.2
Li, D.3
Barral-Rodriguez, S.4
Ott, J.5
-
38
-
-
84868444383
-
Unraveling multiple MHC gene associations with systemic lupus erythe-matosus: Model choice indicates a role for HLA alleles and non-HLA genes in Europeans
-
Morris DL, Taylor KE, Fernando MM, Nititham J, Alarcon-Riquelme ME, Barcellos LF et al. Unraveling multiple MHC gene associations with systemic lupus erythe-matosus: model choice indicates a role for HLA alleles and non-HLA genes in Europeans. Am J Hum Genet 2012; 91: 778-793.
-
(2012)
Am J Hum Genet
, vol.91
, pp. 778-793
-
-
Morris, D.L.1
Taylor, K.E.2
Fernando, M.M.3
Nititham, J.4
Alarcon-Riquelme, M.E.5
Barcellos, L.F.6
-
39
-
-
69949161999
-
Exploring the diabetogenicity of the HLA-B18-DR3 CEH: Independent association with T1D genetic risk close to HLA-DOA
-
Santin I, Castellanos-Rubio A, Aransay AM, Gutierrez G, Gaztambide S, Rica I et al. Exploring the diabetogenicity of the HLA-B18-DR3 CEH: independent association with T1D genetic risk close to HLA-DOA. Genes Immun 2009; 10: 596-600.
-
(2009)
Genes Immun
, vol.10
, pp. 596-600
-
-
Santin, I.1
Castellanos-Rubio, A.2
Aransay, A.M.3
Gutierrez, G.4
Gaztambide, S.5
Rica, I.6
-
40
-
-
64149115125
-
Detection of aberrant transcription of major histocompatibility complex class II antigen presentation genes in chronic lymphocytic leukaemia identifies HLA-DOA mRNA as a prognostic factor for survival
-
Souwer Y, Chamuleau ME, van de Loosdrecht AA, Tolosa E, Jorritsma T, Muris JJ et al. Detection of aberrant transcription of major histocompatibility complex class II antigen presentation genes in chronic lymphocytic leukaemia identifies HLA-DOA mRNA as a prognostic factor for survival. Br J Haematol 2009; 145: 334-343.
-
(2009)
Br J Haematol
, vol.145
, pp. 334-343
-
-
Souwer, Y.1
Chamuleau, M.E.2
Van De Loosdrecht, A.A.3
Tolosa, E.4
Jorritsma, T.5
Muris, J.J.6
-
41
-
-
80051917922
-
Cutting edge: HLA-DO impairs the incorporation of HLA-DM into exosomes
-
Xiu F, Cô té MH, Bourgeois-Daigneault MC, Brunet A, Gauvreau ME, Shaw A et al. Cutting edge: HLA-DO impairs the incorporation of HLA-DM into exosomes. J Immunol 2011; 187: 1547-1551.
-
(2011)
J Immunol
, vol.187
, pp. 1547-1551
-
-
Xiu, F.1
Côté, M.H.2
Bourgeois-Daigneault, M.C.3
Brunet, A.4
Gauvreau, M.E.5
Shaw, A.6
-
42
-
-
33748302972
-
Conserved extended haplotypes of the major histocompatibility complex: Further characterization
-
Dorak MT, Shao W, Machulla HK, Lobashevsky ES, Tang J, Park MH et al. Conserved extended haplotypes of the major histocompatibility complex: further characterization. Genes Immun 2006; 7: 450-467.
-
(2006)
Genes Immun
, vol.7
, pp. 450-467
-
-
Dorak, M.T.1
Shao, W.2
MacHulla, H.K.3
Lobashevsky, E.S.4
Tang, J.5
Park, M.H.6
-
43
-
-
82255170694
-
Fine points in mapping autoimmunity
-
Polychronakos C. Fine points in mapping autoimmunity. Nat Genet 2011; 43: 1173-1174.
-
(2011)
Nat Genet
, vol.43
, pp. 1173-1174
-
-
Polychronakos, C.1
-
44
-
-
82255192188
-
Dense gen-otyping identifies and localizes multiple common and rare variant association signals in celiac disease
-
Trynka G, Hunt KA, Bockett NA, Romanos J, Mistry V, Szperl A et al. Dense gen-otyping identifies and localizes multiple common and rare variant association signals in celiac disease. Nat Genet 2011; 43: 1193-1201.
-
(2011)
Nat Genet
, vol.43
, pp. 1193-1201
-
-
Trynka, G.1
Hunt, K.A.2
Bockett, N.A.3
Romanos, J.4
Mistry, V.5
Szperl, A.6
-
45
-
-
23844539743
-
A human ImmunoChip cDNA microarray provides a comprehensive tool to study immune responses
-
Nikula T, West A, Katajamaa M, Lönnberg T, Sara R, Aittokallio T et al. A human ImmunoChip cDNA microarray provides a comprehensive tool to study immune responses. J Immunol Methods 2005; 303: 122-134.
-
(2005)
J Immunol Methods
, vol.303
, pp. 122-134
-
-
Nikula, T.1
West, A.2
Katajamaa, M.3
Lönnberg, T.4
Sara, R.5
Aittokallio, T.6
-
46
-
-
79960279940
-
Promise and pitfalls of the Immunochip
-
Cortes A, Brown MA. Promise and pitfalls of the Immunochip. Arthritis Res Ther 2011; 13: 101.
-
(2011)
Arthritis Res Ther
, vol.13
, pp. 101
-
-
Cortes, A.1
Brown, M.A.2
-
47
-
-
0034826484
-
Virologic and immunologic determinants of heterosexual transmission of human immunodeficiency virus type 1 in Africa
-
Fideli US, Allen SA, Musonda R, Trask S, Hahn BH, Weiss H et al. Virologic and immunologic determinants of heterosexual transmission of human immunodeficiency virus type 1 in Africa. AIDS Res Hum Retroviruses 2001; 17: 901-910.
-
(2001)
AIDS Res Hum Retroviruses
, vol.17
, pp. 901-910
-
-
Fideli, U.S.1
Allen, S.A.2
Musonda, R.3
Trask, S.4
Hahn, B.H.5
Weiss, H.6
-
48
-
-
0036133071
-
Molecular epidemiology of human immunodeficiency virus type 1 transmission in a heterosexual cohort of discordant couples in Zambia
-
Trask SA, Derdeyn CA, Fideli U, Chen Y, Meleth S, Kasolo F et al. Molecular epidemiology of human immunodeficiency virus type 1 transmission in a heterosexual cohort of discordant couples in Zambia. J Virol 2002; 76: 397-405.
-
(2002)
J Virol
, vol.76
, pp. 397-405
-
-
Trask, S.A.1
Derdeyn, C.A.2
Fideli, U.3
Chen, Y.4
Meleth, S.5
Kasolo, F.6
-
49
-
-
39049161208
-
Enrollment and retention of HIV discordant couples in Lusaka, Zambia
-
Kempf MC, Allen S, Zulu I, Kancheya N, Stephenson R, Brill I et al. Enrollment and retention of HIV discordant couples in Lusaka, Zambia. J Acquir Immune Defic Syndr 2008; 47: 116-125.
-
(2008)
J Acquir Immune Defic Syndr
, vol.47
, pp. 116-125
-
-
Kempf, M.C.1
Allen, S.2
Zulu, I.3
Kancheya, N.4
Stephenson, R.5
Brill, I.6
-
50
-
-
71149112981
-
Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies
-
Browning BL, Yu Z. Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies. Am J Hum Genet 2009; 85: 847-861.
-
(2009)
Am J Hum Genet
, vol.85
, pp. 847-861
-
-
Browning, B.L.1
Yu, Z.2
-
51
-
-
33749137515
-
A highresolution HLA and SNP haplotype map for disease association studies in the extended human MHC
-
de Bakker PI, McVean G, Sabeti PC, Miretti MM, Green T, Marchini J et al. A highresolution HLA and SNP haplotype map for disease association studies in the extended human MHC. Nat Genet 2006; 38: 1166-1172.
-
(2006)
Nat Genet
, vol.38
, pp. 1166-1172
-
-
De Bakker, P.I.1
McVean, G.2
Sabeti, P.C.3
Miretti, M.M.4
Green, T.5
Marchini, J.6
-
52
-
-
78149265272
-
Robust relationship inference in genome-wide association studies
-
Manichaikul A, Mychaleckyj JC, Rich SS, Daly K, Sale M, Chen WM. Robust relationship inference in genome-wide association studies. Bioinformatics 2010; 26: 2867-2873.
-
(2010)
Bioinformatics
, vol.26
, pp. 2867-2873
-
-
Manichaikul, A.1
Mychaleckyj, J.C.2
Rich, S.S.3
Daly, K.4
Sale, M.5
Chen, W.M.6
-
53
-
-
84860571639
-
Population structure of Hispanics in the United States: The multi-ethnic study of atherosclerosis
-
Manichaikul A, Palmas W, Rodriguez CJ, Peralta CA, Divers J, Guo X et al. Population structure of Hispanics in the United States: the multi-ethnic study of atherosclerosis. PLoS Genet 2012; 8: e1002640.
-
(2012)
PLoS Genet
, vol.8
-
-
Manichaikul, A.1
Palmas, W.2
Rodriguez, C.J.3
Peralta, C.A.4
Divers, J.5
Guo, X.6
-
54
-
-
40749128980
-
A unified association analysis approach for family and unrelated samples correcting for stratification
-
Zhu X, Li S, Cooper RS, Elston RC. A unified association analysis approach for family and unrelated samples correcting for stratification. Am J Hum Genet 2008; 82: 352-365.
-
(2008)
Am J Hum Genet
, vol.82
, pp. 352-365
-
-
Zhu, X.1
Li, S.2
Cooper, R.S.3
Elston, R.C.4
-
55
-
-
77956331627
-
Integrating common and rare genetic variation in diverse human populations
-
International HapMap 3 Consortium
-
International HapMap 3 Consortium, Altshuler DM, Gibbs RA, Peltonen L, Altshuler DM, Gibbs RA et al. Integrating common and rare genetic variation in diverse human populations. Nature 2010; 467: 52-58.
-
(2010)
Nature
, vol.467
, pp. 52-58
-
-
Altshuler, D.M.1
Gibbs, R.A.2
Peltonen, L.3
Altshuler, D.M.4
Gibbs, R.A.5
-
56
-
-
13444269543
-
Haploview: Analysis and visualization of LD and haplotype maps
-
Barrett JC, Fry B, Maller J, Daly MJ. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005; 21: 263-265.
-
(2005)
Bioinformatics
, vol.21
, pp. 263-265
-
-
Barrett, J.C.1
Fry, B.2
Maller, J.3
Daly, M.J.4
-
57
-
-
80053564955
-
Using penalised logistic regression to fine map HLA variants for rheumatoid arthritis
-
Vignal CM, Bansal AT, Balding DJ. Using penalised logistic regression to fine map HLA variants for rheumatoid arthritis. Ann Hum Genet 2011; 75: 655-664.
-
(2011)
Ann Hum Genet
, vol.75
, pp. 655-664
-
-
Vignal, C.M.1
Bansal, A.T.2
Balding, D.J.3
-
58
-
-
43249090541
-
A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms
-
Gao X, Starmer J, Martin ER. A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms. Genet Epidemiol 2008; 32: 361-369.
-
(2008)
Genet Epidemiol
, vol.32
, pp. 361-369
-
-
Gao, X.1
Starmer, J.2
Martin, E.R.3
-
59
-
-
75649151064
-
Avoiding the high Bon-ferroni penalty in genome-wide association studies
-
Gao X, Becker LC, Becker DM, Starmer JD, Province MA. Avoiding the high Bon-ferroni penalty in genome-wide association studies. Genet Epidemiol 2010; 34: 100-105.
-
(2010)
Genet Epidemiol
, vol.34
, pp. 100-105
-
-
Gao, X.1
Becker, L.C.2
Becker, D.M.3
Starmer, J.D.4
Province, M.A.5
-
60
-
-
53149084143
-
Human leukocyte antigen class i genotyes in relation to heterosexual HIV type 1 transmission within discordant couples
-
Tang J, Shao W, Yoo YJ, Brill I, Mulenga J, Allen S et al. Human leukocyte antigen class I genotyes in relation to heterosexual HIV type 1 transmission within discordant couples. J Immunol 2008; 181: 2626-2635.
-
(2008)
J Immunol
, vol.181
, pp. 2626-2635
-
-
Tang, J.1
Shao, W.2
Yoo, Y.J.3
Brill, I.4
Mulenga, J.5
Allen, S.6
-
61
-
-
84858779229
-
HaploReg: A resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants
-
Database issue
-
Ward LD, Kellis M. HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants. Nucleic Acids Res 2012; 40(Database issue): D930-D934.
-
(2012)
Nucleic Acids Res
, vol.40
-
-
Ward, L.D.1
Kellis, M.2
|