메뉴 건너뛰기




Volumn 35, Issue 9, 2014, Pages 4499-4517

Comparing within-subject classification and regularization methods in fMRI for large and small sample sizes

Author keywords

BOLD fMRI; Data driven metrics; Head motion; Model optimization; Multivariate analysis; Physiological noise; Preprocessing

Indexed keywords

OXYGEN;

EID: 84904515523     PISSN: 10659471     EISSN: 10970193     Source Type: Journal    
DOI: 10.1002/hbm.22490     Document Type: Article
Times cited : (19)

References (57)
  • 1
    • 33846492382 scopus 로고    scopus 로고
    • Analyzing assessors and products in sorting tasks: DISTATIS, theory and applications
    • Abdi H, Valentin D, Chollet S, Chrea C (2007): Analyzing assessors and products in sorting tasks: DISTATIS, theory and applications. Food Quality Prefer 18:627-640.
    • (2007) Food Quality Prefer , vol.18 , pp. 627-640
    • Abdi, H.1    Valentin, D.2    Chollet, S.3    Chrea, C.4
  • 3
    • 33846516584 scopus 로고    scopus 로고
    • In: Jordan M, Kleinberg J, Scholkopf B, editors. Chapter 4: Linear Models for Classification, New York, NY: Springer.
    • Bishop CM (2006): In: Jordan M, Kleinberg J, Scholkopf B, editors. Pattern Recognition and Machine Learning. Chapter 4: Linear Models for Classification p. 207-208, New York, NY: Springer.
    • (2006) Pattern Recognition and Machine Learning , pp. 207-208
    • Bishop, C.M.1
  • 5
    • 0037765189 scopus 로고    scopus 로고
    • Patterns of activity in the categorical representations of objects
    • Carlson TA, Schrater P, He S (2003): Patterns of activity in the categorical representations of objects. J Cog Neurosci 15:704-717.
    • (2003) J Cog Neurosci , vol.15 , pp. 704-717
    • Carlson, T.A.1    Schrater, P.2    He, S.3
  • 6
    • 55149117963 scopus 로고    scopus 로고
    • Prediction and interpretation of distributed neural activity with sparse models
    • Carroll MK, Cecchi GA, Rish I, Garg R, Rao AR (2009): Prediction and interpretation of distributed neural activity with sparse models. Neuroimage. 44:112-122.
    • (2009) Neuroimage. , vol.44 , pp. 112-122
    • Carroll, M.K.1    Cecchi, G.A.2    Rish, I.3    Garg, R.4    Rao, A.R.5
  • 7
    • 54149098555 scopus 로고    scopus 로고
    • Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies
    • Carter CS, Heckers S, Nichols T, Pine DS, Strother S (2008): Optimizing the design and analysis of clinical functional magnetic resonance imaging research studies. Biol Psychiatry 64:842-849.
    • (2008) Biol Psychiatry , vol.64 , pp. 842-849
    • Carter, C.S.1    Heckers, S.2    Nichols, T.3    Pine, D.S.4    Strother, S.5
  • 8
    • 84857569633 scopus 로고    scopus 로고
    • Optimizing preprocessing and analysis pipelines for single-subject fMRI: 2. Interactions with ICA, PCA, task contrast and inter-subject heterogeneity
    • Churchill NW, Yourganov G, Oder A, Tam F, Graham SJ, Strother SC (2012): Optimizing preprocessing and analysis pipelines for single-subject fMRI: 2. Interactions with ICA, PCA, task contrast and inter-subject heterogeneity. PLoS One 7:e31147.
    • (2012) PLoS One , vol.7
    • Churchill, N.W.1    Yourganov, G.2    Oder, A.3    Tam, F.4    Graham, S.J.5    Strother, S.C.6
  • 12
    • 38749110363 scopus 로고    scopus 로고
    • A projection pursuit algorithm to classify individuals using fMRI data: Application to schizophrenia
    • Demirci O, Clark VP, Calhoun VD (2008): A projection pursuit algorithm to classify individuals using fMRI data: Application to schizophrenia. Neuroimage 4:1774-1782.
    • (2008) Neuroimage , vol.4 , pp. 1774-1782
    • Demirci, O.1    Clark, V.P.2    Calhoun, V.D.3
  • 14
    • 67651054970 scopus 로고    scopus 로고
    • Resting-state BOLD networks versus task-associated functional MRI for distinguishing Alzheimer's disease risk groups
    • Fleisher AS, Sherzai A, Taylor C, Langbaum JBS, Chen K, Buxton RB (2009): Resting-state BOLD networks versus task-associated functional MRI for distinguishing Alzheimer's disease risk groups. Neuroimage 47:1678-1690.
    • (2009) Neuroimage , vol.47 , pp. 1678-1690
    • Fleisher, A.S.1    Sherzai, A.2    Taylor, C.3    Langbaum, J.B.S.4    Chen, K.5    Buxton, R.B.6
  • 15
    • 45849134070 scopus 로고    scopus 로고
    • Sparse inverse covariance estimation with the graphical lasso
    • Friedman J, Hastie T, Tibshirani R (2008): Sparse inverse covariance estimation with the graphical lasso. Biostatistics 9:432-441.
    • (2008) Biostatistics , vol.9 , pp. 432-441
    • Friedman, J.1    Hastie, T.2    Tibshirani, R.3
  • 19
    • 1842427969 scopus 로고    scopus 로고
    • Default-mode network activity distinguishes Alzheimer's disease from healthy aging: Evidence from functional MRI
    • Greicius MD, Srivastava G, Reiss AL, Menon V (2004): Default-mode network activity distinguishes Alzheimer's disease from healthy aging: Evidence from functional MRI. Proc Natl Acad Sci USA 101:4637-4642.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 4637-4642
    • Greicius, M.D.1    Srivastava, G.2    Reiss, A.L.3    Menon, V.4
  • 20
    • 21844486429 scopus 로고
    • Penalized discriminant analysis
    • Hastie T, Buja A, Tibshirani R (1995): Penalized discriminant analysis. Ann Stat 23:73-102.
    • (1995) Ann Stat , vol.23 , pp. 73-102
    • Hastie, T.1    Buja, A.2    Tibshirani, R.3
  • 21
    • 0035964792 scopus 로고    scopus 로고
    • Distributed and overlapping representations of faces and objects in ventral temporal cortex
    • Haxby JV, Gobbini MI, Furey ML, Ishai A, Schouten JL, Pietrini P (2001): Distributed and overlapping representations of faces and objects in ventral temporal cortex. Science 293:2425-2430.
    • (2001) Science , vol.293 , pp. 2425-2430
    • Haxby, J.V.1    Gobbini, M.I.2    Furey, M.L.3    Ishai, A.4    Schouten, J.L.5    Pietrini, P.6
  • 22
    • 0042826822 scopus 로고    scopus 로고
    • Independent component analysis: Algorithms and applications
    • Hyvärinen A, Oja E (2000): Independent component analysis: Algorithms and applications. Neural Netw 13:411-430.
    • (2000) Neural Netw , vol.13 , pp. 411-430
    • Hyvärinen, A.1    Oja, E.2
  • 26
    • 19344370474 scopus 로고    scopus 로고
    • Support vector machines for temporal classification of block design fMRI data
    • LaConte S, Strother S, Cherkassky V, Anderson J, Hu X (2005): Support vector machines for temporal classification of block design fMRI data. Neuroimage 26:317-329.
    • (2005) Neuroimage , vol.26 , pp. 317-329
    • LaConte, S.1    Strother, S.2    Cherkassky, V.3    Anderson, J.4    Hu, X.5
  • 27
    • 0036257354 scopus 로고    scopus 로고
    • An evaluation of methods for detecting brain activations from functional neuroimages
    • Lukic AS, Wernick MN, Strother SC (2002) An evaluation of methods for detecting brain activations from functional neuroimages. Artif Intell Med 25:69-88.
    • (2002) Artif Intell Med , vol.25 , pp. 69-88
    • Lukic, A.S.1    Wernick, M.N.2    Strother, S.C.3
  • 29
    • 77955307443 scopus 로고    scopus 로고
    • Comparison of multivariate classifiers and response normalizations for pattern-information fMRI
    • Misaki M, Kim Y, Bandettini P, Kriegeskorte N.(2010): Comparison of multivariate classifiers and response normalizations for pattern-information fMRI. Neuroimage 53:103-118.
    • (2010) Neuroimage , vol.53 , pp. 103-118
    • Misaki, M.1    Kim, Y.2    Bandettini, P.3    Kriegeskorte, N.4
  • 32
    • 84855449460 scopus 로고    scopus 로고
    • Multivariate pattern classification reveals differential brain activation during emotional processing in individuals with psychosis proneness
    • Modinos G, Pettersson-Yeo W, Allen P, McGuire PK, Aleman A, Mechelli A (2012): Multivariate pattern classification reveals differential brain activation during emotional processing in individuals with psychosis proneness. Neuroimage 59:3033-3041.
    • (2012) Neuroimage , vol.59 , pp. 3033-3041
    • Modinos, G.1    Pettersson-Yeo, W.2    Allen, P.3    McGuire, P.K.4    Aleman, A.5    Mechelli, A.6
  • 33
    • 0025969753 scopus 로고
    • A regional covariance approach to the analysis of functional patterns in positron emission tomographic data
    • Moeller JR, Strother SC (1991): A regional covariance approach to the analysis of functional patterns in positron emission tomographic data. J Cereb Blood Flow Metab 11:121-135.
    • (1991) J Cereb Blood Flow Metab , vol.11 , pp. 121-135
    • Moeller, J.R.1    Strother, S.C.2
  • 35
    • 80052323328 scopus 로고    scopus 로고
    • Generalized sparse regularization with application to fMRI brain decoding
    • Ng B, Abugharbieh R (2011): Generalized sparse regularization with application to fMRI brain decoding. Lecture Notes Comput Sci 6801:612-623.
    • (2011) Lecture Notes Comput Sci , vol.6801 , pp. 612-623
    • Ng, B.1    Abugharbieh, R.2
  • 36
    • 0031803522 scopus 로고    scopus 로고
    • On the characteristics of functional magnetic resonance imaging of the brain
    • Ogawa S, Menon RS, Kim SG, Ugurbil K (1998): On the characteristics of functional magnetic resonance imaging of the brain. Annu Rev Biomol Struct 27:447-474.
    • (1998) Annu Rev Biomol Struct , vol.27 , pp. 447-474
    • Ogawa, S.1    Menon, R.S.2    Kim, S.G.3    Ugurbil, K.4
  • 37
    • 67349272711 scopus 로고    scopus 로고
    • Principal component analysis in mild and moderate Alzheimer's disease-A novel approach to clinical diagnosis
    • Pagani M, Salmaso D, Rodriguez G, Nardo D, Nobili F. (2009): Principal component analysis in mild and moderate Alzheimer's disease-A novel approach to clinical diagnosis. Psychiatry Res 173:8-14.
    • (2009) Psychiatry Res , vol.173 , pp. 8-14
    • Pagani, M.1    Salmaso, D.2    Rodriguez, G.3    Nardo, D.4    Nobili, F.5
  • 38
    • 65549168742 scopus 로고    scopus 로고
    • Machine learning classifiers and fMRI: A tutorial overview
    • Pereira F, Mitchell T, Botvinick M. (2009): Machine learning classifiers and fMRI: A tutorial overview. Neuroimage 45:S199-S209.
    • (2009) Neuroimage , vol.45
    • Pereira, F.1    Mitchell, T.2    Botvinick, M.3
  • 39
    • 77950535667 scopus 로고    scopus 로고
    • Linking brain-wide multivoxel activation patterns to behaviour: Examples from language and math
    • Raizada RDS, Tsao FM, Liu HM, Holloway ID, Ansari D (2010): Linking brain-wide multivoxel activation patterns to behaviour: Examples from language and math. Neuroimage 51:462-471.
    • (2010) Neuroimage , vol.51 , pp. 462-471
    • Raizada, R.D.S.1    Tsao, F.M.2    Liu, H.M.3    Holloway, I.D.4    Ansari, D.5
  • 40
  • 41
    • 84857766300 scopus 로고    scopus 로고
    • Nonlinear denoising and analysis of neuroimages with kernel principal component analysis and pre-image estimation
    • Rasmussen PM, Abrahamsen TJ, Madsen KH, Hansen LK (2012): Nonlinear denoising and analysis of neuroimages with kernel principal component analysis and pre-image estimation. Neuroimage 60:1807-1818.
    • (2012) Neuroimage , vol.60 , pp. 1807-1818
    • Rasmussen, P.M.1    Abrahamsen, T.J.2    Madsen, K.H.3    Hansen, L.K.4
  • 43
    • 77951976541 scopus 로고    scopus 로고
    • Sparse logistic regression for whole brain classification of fMRI data
    • Ryali S, Supekar K, Abrams DA, Menon V (2010): Sparse logistic regression for whole brain classification of fMRI data. Neuroimage 51:752-764.
    • (2010) Neuroimage , vol.51 , pp. 752-764
    • Ryali, S.1    Supekar, K.2    Abrams, D.A.3    Menon, V.4
  • 44
    • 77950808441 scopus 로고    scopus 로고
    • Early functional magnetic resonance imaging activations predict language outcome after stroke
    • Saur D. Ronneberger O, Kummerer D, Mader I, Weiller C, Kloppel S (2010): Early functional magnetic resonance imaging activations predict language outcome after stroke. Brain 133:1252-1264.
    • (2010) Brain , vol.133 , pp. 1252-1264
    • Saur, D.1    Ronneberger, O.2    Kummerer, D.3    Mader, I.4    Weiller, C.5    Kloppel, S.6
  • 45
    • 78149344628 scopus 로고    scopus 로고
    • Comparing classification methods for longitudinal fMRI studies
    • Schmah T, Yourganov G, Zemel RS, Hinton GR. (2010): Comparing classification methods for longitudinal fMRI studies. Neural Comput 22:2729-2762.
    • (2010) Neural Comput , vol.22 , pp. 2729-2762
    • Schmah, T.1    Yourganov, G.2    Zemel, R.S.3    Hinton, G.R.4
  • 47
    • 38949165373 scopus 로고    scopus 로고
    • Using fMRI brain activation to identify cognitive states associated with perception of tools and dwellings
    • Shinkareva SV, Mason RA, Malave VL, Wang W, Mitchell TM, Just MA (2007): Using fMRI brain activation to identify cognitive states associated with perception of tools and dwellings. PLoS ONE 3: e1394.
    • (2007) PLoS ONE , vol.3
    • Shinkareva, S.V.1    Mason, R.A.2    Malave, V.L.3    Wang, W.4    Mitchell, T.M.5    Just, M.A.6
  • 48
    • 79955011391 scopus 로고    scopus 로고
    • Real-time support vector classification and feedback of multiple emotional brain states
    • Sitaram R, Lee S, Ruiz S, Rana M, Veit R, Birbaumer N (2010): Real-time support vector classification and feedback of multiple emotional brain states. Neuroimage 56:753-765.
    • (2010) Neuroimage , vol.56 , pp. 753-765
    • Sitaram, R.1    Lee, S.2    Ruiz, S.3    Rana, M.4    Veit, R.5    Birbaumer, N.6
  • 49
    • 0036338502 scopus 로고    scopus 로고
    • The quantitative evaluation of functional neuroimaging experiments: The NPAIRS data analysis framework
    • Strother SC, Anderson J, Hansen LK, Kjems U (2002): The quantitative evaluation of functional neuroimaging experiments: The NPAIRS data analysis framework. Neuroimage 15:747-771.
    • (2002) Neuroimage , vol.15 , pp. 747-771
    • Strother, S.C.1    Anderson, J.2    Hansen, L.K.3    Kjems, U.4
  • 51
    • 35148890661 scopus 로고    scopus 로고
    • Altered functional connectivity in early Alzheimer's disease: A resting-state fMRI study
    • Wang K, Liang M, Wang L, Tian L, Zhang X, Li K, Jiang T (2006): Altered functional connectivity in early Alzheimer's disease: A resting-state fMRI study. Hum Brain Mapp 28:976-978.
    • (2006) Hum Brain Mapp , vol.28 , pp. 976-978
    • Wang, K.1    Liang, M.2    Wang, L.3    Tian, L.4    Zhang, X.5    Li, K.6    Jiang, T.7
  • 53
    • 56349145100 scopus 로고    scopus 로고
    • Multivariate pattern analysis of functional magnetic resonance imaging data reveals deficits in distributed representations in schizophrenia
    • Yoon JH, Tamir D, Minzenberg MJ, Ragland JD, Ursu S, Carter CS (2008): Multivariate pattern analysis of functional magnetic resonance imaging data reveals deficits in distributed representations in schizophrenia. Biol Psychiatry 64:1035-1041.
    • (2008) Biol Psychiatry , vol.64 , pp. 1035-1041
    • Yoon, J.H.1    Tamir, D.2    Minzenberg, M.J.3    Ragland, J.D.4    Ursu, S.5    Carter, C.S.6
  • 57
    • 16244401458 scopus 로고    scopus 로고
    • Regularization and variable selection via the elastic net
    • Zou H, Hastie T (2005): Regularization and variable selection via the elastic net. J R Stat Soc Ser B 67:301-320.
    • (2005) J R Stat Soc Ser B , vol.67 , pp. 301-320
    • Zou, H.1    Hastie, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.