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Volumn 69, Issue 9, 2014, Pages 2527-2530

Evolution of HIV-1 quasispecies and coreceptor use in cell reservoirs of patients on suppressive antiretroviral therapy

Author keywords

Selection pressure; Ultra deep sequencing; V3 envelope region

Indexed keywords

ANTI HUMAN IMMUNODEFICIENCY VIRUS AGENT; CHEMOKINE RECEPTOR CXCR4; VIRUS ENVELOPE PROTEIN; ANTIRETROVIRUS AGENT; VIRUS DNA; VIRUS RECEPTOR;

EID: 84904485194     PISSN: 03057453     EISSN: 14602091     Source Type: Journal    
DOI: 10.1093/jac/dku147     Document Type: Article
Times cited : (18)

References (20)
  • 1
    • 0030913366 scopus 로고    scopus 로고
    • Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection
    • Chun TW, Carruth L, Finzi D, et al. Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection. Nature 1997; 387: 183-8.
    • (1997) Nature , vol.387 , pp. 183-188
    • Chun, T.W.1    Carruth, L.2    Finzi, D.3
  • 2
    • 0036440563 scopus 로고    scopus 로고
    • Evolution of total and integrated HIV-1 DNA and change in DNA sequences in patients with sustained plasma virus suppression
    • Izopet J, Cazabat M, Pasquier C, et al. Evolution of total and integrated HIV-1 DNA and change in DNA sequences in patients with sustained plasma virus suppression. Virology 2002; 302: 393-404.
    • (2002) Virology , vol.302 , pp. 393-404
    • Izopet, J.1    Cazabat, M.2    Pasquier, C.3
  • 3
    • 15044339793 scopus 로고    scopus 로고
    • R5 to X4 switch of the predominant HIV-1 population in cellular reservoirs during effective highly active antiretroviral therapy
    • Delobel P, Sandres-Saune K, Cazabat M, et al. R5 to X4 switch of the predominant HIV-1 population in cellular reservoirs during effective highly active antiretroviral therapy. JAcquir ImmuneDefic Syndr 2005; 38: 382-92.
    • (2005) JAcquir ImmuneDefic Syndr , vol.38 , pp. 382-392
    • Delobel, P.1    Sandres-Saune, K.2    Cazabat, M.3
  • 4
    • 0033012398 scopus 로고    scopus 로고
    • Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease
    • Berger EA, Murphy PM, Farber JM. Chemokine receptors as HIV-1 coreceptors: roles in viral entry, tropism, and disease. Annu Rev Immunol 1999; 17: 657-700.
    • (1999) Annu Rev Immunol , vol.17 , pp. 657-700
    • Berger, E.A.1    Murphy, P.M.2    Farber, J.M.3
  • 5
    • 84860756398 scopus 로고    scopus 로고
    • Performance comparison of benchtop high-throughput sequencing platforms
    • Loman NJ,Misra RV, Dallman TJ, et al. Performance comparison of benchtop high-throughput sequencing platforms. Nat Biotechnol 2012; 30: 434-9.
    • (2012) Nat Biotechnol , vol.30 , pp. 434-439
    • Loman, N.J.1    Misra, R.V.2    Dallman, T.J.3
  • 6
    • 84887521069 scopus 로고    scopus 로고
    • Characterization of CXCR4-using HIV-1 during primary infection by ultra-deep pyrosequencing
    • Raymond S, Saliou A, Nicot F, et al. Characterization of CXCR4-using HIV-1 during primary infection by ultra-deep pyrosequencing. J Antimicrob Chemother 2013; 68: 2875-81.
    • (2013) J Antimicrob Chemother , vol.68 , pp. 2875-2881
    • Raymond, S.1    Saliou, A.2    Nicot, F.3
  • 7
    • 33749491636 scopus 로고    scopus 로고
    • Naive T-cell depletion related to infection by X4 human immunodeficiency virus type 1 in poor immunological responders to highly active antiretroviral therapy
    • Delobel P, Nugeyre MT, Cazabat M, et al. Naive T-cell depletion related to infection by X4 human immunodeficiency virus type 1 in poor immunological responders to highly active antiretroviral therapy. J Virol 2006; 80: 10229-36.
    • (2006) J Virol , vol.80 , pp. 10229-10236
    • Delobel, P.1    Nugeyre, M.T.2    Cazabat, M.3
  • 8
    • 74149093296 scopus 로고    scopus 로고
    • Development and performance of a new recombinant virus phenotypic entry assay to determine HIV-1 coreceptor usage
    • Raymond S, Delobel P, Mavigner M, et al. Development and performance of a new recombinant virus phenotypic entry assay to determine HIV-1 coreceptor usage. J Clin Virol 2010; 47: 126-30.
    • (2010) J Clin Virol , vol.47 , pp. 126-130
    • Raymond, S.1    Delobel, P.2    Mavigner, M.3
  • 9
    • 79956303092 scopus 로고    scopus 로고
    • Concordance between two phenotypic assays and ultradeep pyrosequencing for determining HIV-1 tropism
    • Saliou A, Delobel P, Dubois M, et al. Concordance between two phenotypic assays and ultradeep pyrosequencing for determining HIV-1 tropism. Antimicrob Agents Chemother 2011; 55: 2831-6.
    • (2011) Antimicrob Agents Chemother , vol.55 , pp. 2831-2836
    • Saliou, A.1    Delobel, P.2    Dubois, M.3
  • 10
    • 79955812991 scopus 로고    scopus 로고
    • Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis
    • Däumer M, Kaiser R, Klein R, et al. Genotypic tropism testing by massively parallel sequencing: qualitative and quantitative analysis. BMC Med Inform Decis Mak 2011; 11: 30.
    • (2011) BMC Med Inform Decis Mak , vol.11 , pp. 30
    • Däumer, M.1    Kaiser, R.2    Klein, R.3
  • 11
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 2011; 28: 2731-9.
    • (2011) Mol Biol Evol , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3
  • 12
    • 0033639150 scopus 로고    scopus 로고
    • Statistical methods for detecting molecular adaptation
    • Yang B. Statistical methods for detecting molecular adaptation. Trends Ecol Evol (Amst) 2000; 15: 496-503.
    • (2000) Trends Ecol Evol (Amst) , vol.15 , pp. 496-503
    • Yang, B.1
  • 13
    • 77954180006 scopus 로고    scopus 로고
    • High sensitivity of specific genotypic tools for detection of X4 variants in antiretroviral-experienced patients suitable to be treated with CCR5 antagonists
    • Seclen E, Garrido C, Gonzalez MD, et al. High sensitivity of specific genotypic tools for detection of X4 variants in antiretroviral-experienced patients suitable to be treated with CCR5 antagonists. J Antimicrob Chemother 2010; 65: 1486-92.
    • (2010) J Antimicrob Chemother , vol.65 , pp. 1486-1492
    • Seclen, E.1    Garrido, C.2    Gonzalez, M.D.3
  • 14
    • 37349009949 scopus 로고    scopus 로고
    • HIV-1 X4/R5 co-receptor in viral reservoir during suppressive HAART
    • Soulie C, Marcelin AG, Ghosn J, et al. HIV-1 X4/R5 co-receptor in viral reservoir during suppressive HAART. AIDS 2007; 21: 2243-5.
    • (2007) AIDS , vol.21 , pp. 2243-2245
    • Soulie, C.1    Marcelin, A.G.2    Ghosn, J.3
  • 15
    • 79951513841 scopus 로고    scopus 로고
    • Low frequency of HIV-1 tropism evolution in patients successfully treated for at least 2 years
    • Soulie C, Lambert-Niclot S, Wirden M, et al. Low frequency of HIV-1 tropism evolution in patients successfully treated for at least 2 years. AIDS 2011; 25: 537-9.
    • (2011) AIDS , vol.25 , pp. 537-539
    • Soulie, C.1    Lambert-Niclot, S.2    Wirden, M.3
  • 16
    • 70350616458 scopus 로고    scopus 로고
    • Co-receptor switch during HAART is independent of virological success
    • Saracino A, Monno L, Cibelli DC, et al. Co-receptor switch during HAART is independent of virological success. J Med Virol 2009; 81: 2036-44.
    • (2009) J Med Virol , vol.81 , pp. 2036-2044
    • Saracino, A.1    Monno, L.2    Cibelli, D.C.3
  • 17
    • 77952577892 scopus 로고    scopus 로고
    • Factors associated with proviral DNA HIV-1 tropism in antiretroviral therapy-treated patients with fully suppressed plasma HIV viral load: implications for the clinical use of CCR5 antagonists
    • Soulié C, Fourati S, Lambert-Niclot S, et al. Factors associated with proviral DNA HIV-1 tropism in antiretroviral therapy-treated patients with fully suppressed plasma HIV viral load: implications for the clinical use of CCR5 antagonists. J Antimicrob Chemother 2010; 65: 749-51.
    • (2010) J Antimicrob Chemother , vol.65 , pp. 749-751
    • Soulié, C.1    Fourati, S.2    Lambert-Niclot, S.3
  • 18
    • 2542510364 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 genetic evolution in patients with prolonged suppression of plasma viremia
    • Martínez MA, Cabana M, Ibáñez A, et al. Human immunodeficiency virus type 1 genetic evolution in patients with prolonged suppression of plasma viremia. Virology 1999; 256: 180-7.
    • (1999) Virology , vol.256 , pp. 180-187
    • Martínez, M.A.1    Cabana, M.2    Ibáñez, A.3
  • 19
    • 84873044224 scopus 로고    scopus 로고
    • An increasing proportion of monotypic HIV-1 DNA sequences during antiretroviral treatment suggests proliferation of HIV-infected cells
    • Wagner TA, McKernan JL, Tobin NH, et al. An increasing proportion of monotypic HIV-1 DNA sequences during antiretroviral treatment suggests proliferation of HIV-infected cells. J Virol 2013; 87: 1770-8.
    • (2013) J Virol , vol.87 , pp. 1770-1778
    • Wagner, T.A.1    McKernan, J.L.2    Tobin, N.H.3
  • 20
    • 80052395837 scopus 로고    scopus 로고
    • Cell-to-cell spread of HIV permits ongoing replication despite antiretroviral therapy
    • Sigal A, Kim JT, Balazs AB, et al. Cell-to-cell spread of HIV permits ongoing replication despite antiretroviral therapy. Nature 2011; 477: 95-8.
    • (2011) Nature , vol.477 , pp. 95-98
    • Sigal, A.1    Kim, J.T.2    Balazs, A.B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.