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Volumn 64, Issue PART 7, 2014, Pages 2431-2436

Pedobacter huanghensis sp. nov. and Pedobacter glacialis sp. nov., isolated from Arctic glacier foreland

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 84904472229     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.061648-0     Document Type: Article
Times cited : (33)

References (27)
  • 1
    • 0035989637 scopus 로고    scopus 로고
    • Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
    • Subcommittee on the taxonomy of Flavobacterium and Cytophaga-like bacteria of the International Committee on Systematics of Prokaryotes
    • Bernardet, J.-F., Nakagawa, Y., Holmes, B. & Subcommittee on the taxonomy of Flavobacterium and Cytophaga-like bacteria of the International Committee on Systematics of Prokaryotes (2002). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. Int J Syst Evol Microbiol 52, 1049-1070.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1049-1070
    • Bernardet, J.-F.1    Nakagawa, Y.2    Holmes, B.3
  • 2
    • 0033803778 scopus 로고    scopus 로고
    • Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov
    • Bowman, J. P. (2000). Description of Cellulophaga algicola sp. nov., isolated from the surfaces of Antarctic algae, and reclassification of Cytophaga uliginosa (ZoBell and Upham 1944) Reichenbach 1989 as Cellulophaga uliginosa comb. nov. Int J Syst Evol Microbiol 50, 1861-1868.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1861-1868
    • Bowman, J.P.1
  • 3
    • 0001991903 scopus 로고
    • Determinative methods of light microscopy
    • In, Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. H. Phillips. Washington, DC: American Society for Microbiology
    • Doetsch, R. N. (1981). Determinative methods of light microscopy. In Manual of Methods for General Bacteriology, pp. 21-33. Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. H. Phillips. Washington, DC: American Society for Microbiology.
    • (1981) Manual of Methods for General Bacteriology , pp. 21-33
    • Doetsch, R.N.1
  • 4
    • 0026527415 scopus 로고
    • Towards a phylogeny of the genus Vibrio based on 16S rRNA sequences
    • Dorsch, M., Lane, D. & Stackebrandt, E. (1992). Towards a phylogeny of the genus Vibrio based on 16S rRNA sequences. Int J Syst Bacteriol 42, 58-63.
    • (1992) Int J Syst Bacteriol , vol.42 , pp. 58-63
    • Dorsch, M.1    Lane, D.2    Stackebrandt, E.3
  • 5
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 6
    • 84959747425 scopus 로고
    • Towards defining the course of evolution: Minimum change for a specific tree topology
    • Fitch, W. M. (1971). Towards defining the course of evolution: minimum change for a specific tree topology. Syst Biol 20, 406-416.
    • (1971) Syst Biol , vol.20 , pp. 406-416
    • Fitch, W.M.1
  • 9
    • 84863230041 scopus 로고    scopus 로고
    • Introducing EzTaxone: A prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
    • other authors
    • Kim, O.-S., Cho, Y.-J., Lee, K., Yoon, S.-H., Kim, M., Na, H., Park, S.-C., Jeon, Y. S., Lee, J.-H. & other authors (2012). Introducing EzTaxone: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species. Int J Syst Evol Microbiol 62, 716-721.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 716-721
    • Kim, O.-S.1    Cho, Y.-J.2    Lee, K.3    Yoon, S.-H.4    Kim, M.5    Na, H.6    Park, S.-C.7    Jeon, Y.S.8    Lee, J.-H.9
  • 10
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 11
    • 84872480030 scopus 로고    scopus 로고
    • VP
    • In, 2nd edn, Edited by N. R. Krieg, J. T. Staley, D. R. Brown, B. P. Hedlund, B. J. Paster, N. L. Ward, W. Ludwig & W. B. Whitman. New York: Springer
    • VP. In Bergey's Manual of Systematic Bacteriology, 2nd edn, vol. 4, pp. 339-351. Edited by N. R. Krieg, J. T. Staley, D. R. Brown, B. P. Hedlund, B. J. Paster, N. L. Ward, W. Ludwig & W. B. Whitman. New York: Springer.
    • (2011) Bergey's Manual of Systematic Bacteriology , vol.4 , pp. 339-351
    • Margesin, R.1    Shivaji, S.2
  • 12
    • 84872455903 scopus 로고    scopus 로고
    • Pedobacter ruber sp. nov., a psychrophilic bacterium isolated from soil
    • Margesin, R. & Zhang, D.-C. (2013). Pedobacter ruber sp. nov., a psychrophilic bacterium isolated from soil. Int J Syst Evol Microbiol 63, 339-344.
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 339-344
    • Margesin, R.1    Zhang, D.-C.2
  • 13
    • 4544378033 scopus 로고    scopus 로고
    • Hydrocarbon degradation and enzyme activities of coldadapted bacteria and yeasts
    • Margesin, R., Gander, S., Zacke, G., Gounot, A. M. & Schinner, F. (2003a). Hydrocarbon degradation and enzyme activities of coldadapted bacteria and yeasts. Extremophiles 7, 451-458.
    • (2003) Extremophiles , vol.7 , pp. 451-458
    • Margesin, R.1    Gander, S.2    Zacke, G.3    Gounot, A.M.4    Schinner, F.5
  • 14
    • 0141502490 scopus 로고    scopus 로고
    • Pedobacter cryoconitis sp. nov., a facultative psychrophile from alpine glacier cryoconite
    • Margesin, R., Spröer, C., Schumann, P. & Schinner, F. (2003b). Pedobacter cryoconitis sp. nov., a facultative psychrophile from alpine glacier cryoconite. Int J Syst Evol Microbiol 53, 1291-1296.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1291-1296
    • Margesin, R.1    Spröer, C.2    Schumann, P.3    Schinner, F.4
  • 15
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G+C content of deoxyribonucleic acid by highperformance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 16
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 19
    • 19544372992 scopus 로고    scopus 로고
    • Pedobacter himalayensis sp. nov., from the Hamta glacier located in the Himalayan mountain ranges of India
    • Shivaji, S., Chaturvedi, P., Reddy, G. S. & Suresh, K. (2005). Pedobacter himalayensis sp. nov., from the Hamta glacier located in the Himalayan mountain ranges of India. Int J Syst Evol Microbiol 55, 1083-1088.
    • (2005) Int J Syst Evol Microbiol , vol.55 , pp. 1083-1088
    • Shivaji, S.1    Chaturvedi, P.2    Reddy, G.S.3    Suresh, K.4
  • 20
    • 0000612080 scopus 로고
    • Phenotypic characterization
    • In, Edited by P. Gerhardt, R. G. E. Murray, W. A. Woods & N. R. Krieg. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1994). Phenotypic characterization. In Methods for General and Molecular Bacteriology, pp. 607-654. Edited by P. Gerhardt, R. G. E. Murray, W. A. Woods & N. R. Krieg. Washington, DC: American Society for Microbiology.
    • (1994) Methods for General and Molecular Bacteriology , pp. 607-654
    • Smibert, R.M.1    Krieg, N.R.2
  • 21
    • 0031894349 scopus 로고    scopus 로고
    • Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov
    • Steyn, P. L., Segers, P., Vancanneyt, M., Sandra, P., Kersters, K. & Joubert, J. J. (1998). Classification of heparinolytic bacteria into a new genus, Pedobacter, comprising four species: Pedobacter heparinus comb. nov., Pedobacter piscium comb. nov., Pedobacter africanus sp. nov. and Pedobacter saltans sp. nov. proposal of the family Sphingobacteriaceae fam. nov. Int J Syst Bacteriol 48, 165-177.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 165-177
    • Steyn, P.L.1    Segers, P.2    Vancanneyt, M.3    Sandra, P.4    Kersters, K.5    Joubert, J.J.6
  • 22
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 23
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 24
    • 0025098748 scopus 로고
    • Lipid composition of Halobacterium lacusprofundi
    • Tindall, B. J. (1990). Lipid composition of Halobacterium lacusprofundi. FEMS Microbiol Lett 66, 199-202.
    • (1990) FEMS Microbiol Lett , vol.66 , pp. 199-202
    • Tindall, B.J.1
  • 25
    • 1042309477 scopus 로고    scopus 로고
    • Phylogenetic analyses of Lampropedia hyalina based on the 16S rRNA gene sequence
    • Xie, C. H. & Yokota, A. (2003). Phylogenetic analyses of Lampropedia hyalina based on the 16S rRNA gene sequence. J Gen Appl Microbiol 49, 345-349.
    • (2003) J Gen Appl Microbiol , vol.49 , pp. 345-349
    • Xie, C.H.1    Yokota, A.2
  • 27
    • 84864703523 scopus 로고    scopus 로고
    • Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus
    • Zhou, Z., Jiang, F., Wang, S., Peng, F., Dai, J., Li, W. & Fang, C. (2012). Pedobacter arcticus sp. nov., a facultative psychrophile isolated from Arctic soil and emended descriptions of the genus Pedobacter, Pedobacter heparinus, Pedobacter daechungensis, Pedobacter terricola, Pedobacter glucosidilyticus and Pedobacter lentus. Int J Syst Evol Microbiol 62, 1963-1969.
    • (2012) Int J Syst Evol Microbiol , vol.62 , pp. 1963-1969
    • Zhou, Z.1    Jiang, F.2    Wang, S.3    Peng, F.4    Dai, J.5    Li, W.6    Fang, C.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.