메뉴 건너뛰기




Volumn 49, Issue 6, 2003, Pages 345-349

Phylogenetic analyses of Lampropedia hyalina based on the 16S rRNA gene sequence

Author keywords

Proteobacteria; 16S rRNA gene sequence; Cellular fatty acid composition; Comamonadaceae; Lampropedia; Phylogeny

Indexed keywords

1,4 BENZOQUINONE; DNA; FATTY ACID; RIBOSOME RNA; RNA 16S; WATER;

EID: 1042309477     PISSN: 00221260     EISSN: None     Source Type: Journal    
DOI: 10.2323/jgam.49.345     Document Type: Article
Times cited : (281)

References (19)
  • 1
    • 0025368103 scopus 로고
    • Isolation and in vitro assembly of the components of the outer S layer of Lampropedia hyalina
    • Austin, J. W. and Murray, R. G. E. (1990) Isolation and in vitro assembly of the components of the outer S layer of Lampropedia hyalina. J. Bacteriol., 172, 3681-3689.
    • (1990) J. Bacteriol. , vol.172 , pp. 3681-3689
    • Austin, J.W.1    Murray, R.G.E.2
  • 2
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • Brosius, J., Palmer, J. L., Kennedy, J. P., and Noller, H. F. (1978) Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc. Natl. Acad. Sci. USA, 75, 4801-4805.
    • (1978) Proc. Natl. Acad. Sci. USA , vol.75 , pp. 4801-4805
    • Brosius, J.1    Palmer, J.L.2    Kennedy, J.P.3    Noller, H.F.4
  • 3
    • 0022374537 scopus 로고
    • Comamonas Davis and Park 1962 gen. nov., nom. rev. emend., and Comamonas terrigena Hugh 1962 sp. nov., nom. rev
    • De Vos, P., Kersters, K., Falsen, E., Pot, B., Gillis, M., Segers, P., and De Ley, J. (1985) Comamonas Davis and Park 1962 gen. nov., nom. rev. emend., and Comamonas terrigena Hugh 1962 sp. nov., nom. rev. Int. J. Syst. Bacteriol., 35, 443-453.
    • (1985) Int. J. Syst. Bacteriol. , vol.35 , pp. 443-453
    • De Vos, P.1    Kersters, K.2    Falsen, E.3    Pot, B.4    Gillis, M.5    Segers, P.6    De Ley, J.7
  • 4
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 5
    • 0000685441 scopus 로고    scopus 로고
    • The road map to the Manual
    • 2nd ed., ed. by Boone, D. R. and Castenholz, R. W., Springer-Verlag, Heidelberg, New York, Berlin
    • Garrity, G. M. and Holt, J. G. (2000) The road map to the Manual. In Bergey's Manual of Systematic Bacteriology, 2nd ed., Vol. 1, ed. by Boone, D. R. and Castenholz, R. W., Springer-Verlag, Heidelberg, New York, Berlin, pp. 119-166.
    • (2000) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 119-166
    • Garrity, G.M.1    Holt, J.G.2
  • 6
    • 1142293666 scopus 로고
    • Brachymonas denitrificans gen. nov., sp. nov., an aerobic chemoorganotrophic bacterium which contains rhodoquinones, and evolutionary relationships of rhodoquinone producers to bacterial species with various quinone classes
    • Hiraishi, A., Shin, Y. K., and Sugiyama, J. (1995) Brachymonas denitrificans gen. nov., sp. nov., an aerobic chemoorganotrophic bacterium which contains rhodoquinones, and evolutionary relationships of rhodoquinone producers to bacterial species with various quinone classes. J. Gen. Appl. Microbiol., 24, 199-213.
    • (1995) J. Gen. Appl. Microbiol. , vol.24 , pp. 199-213
    • Hiraishi, A.1    Shin, Y.K.2    Sugiyama, J.3
  • 9
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol., 16, 111-120.
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 11
    • 0342553547 scopus 로고
    • AL
    • ed. by Krieg, N. R. and Holt, J. G. Williams and Wilkins, Baltimore
    • AL. In Bergey's Manual of Systematic Bacteriology, Vol. 1, ed. by Krieg, N. R. and Holt, J. G. Williams and Wilkins, Baltimore, pp. 402-406.
    • (1984) Bergey's Manual of Systematic Bacteriology , vol.1 , pp. 402-406
    • Murray, R.G.E.1
  • 12
    • 0342343280 scopus 로고
    • Lampropedia hyalina Schroeter (1886) and Vannielia aggregata n.g., n. sp., with remarks on natural and on organized colonies in bacteria
    • Pringsheim, E. G. (1955) Lampropedia hyalina Schroeter (1886) and Vannielia aggregata n.g., n. sp., with remarks on natural and on organized colonies in bacteria. J. Gen. Microbiol., 13, 285-291.
    • (1955) J. Gen. Microbiol. , vol.13 , pp. 285-291
    • Pringsheim, E.G.1
  • 13
    • 0014348242 scopus 로고
    • Physiology and nutrition of Lampropedia hyalina
    • Puttlitz, D. H. and Seeley, H. V. (1968) Physiology and nutrition of Lampropedia hyalina. J. Bacteriol., 96, 931-938.
    • (1968) J. Bacteriol. , vol.96 , pp. 931-938
    • Puttlitz, D.H.1    Seeley, H.V.2
  • 14
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. and Nei, M. (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol., 4, 406-425.
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 15
    • 0003170157 scopus 로고
    • Ueber einige durch Bacterien gebildete Pigmente
    • F. Cohn (1875) J. U. Kern's Verlag, Breslau
    • Schroeter, J. (1872) Ueber einige durch Bacterien gebildete Pigmente. In F. Cohn (1875) Beitrage zür Biologie der Pflanzen, J. U. Kern's Verlag, Breslau, pp. 109-126.
    • (1872) Beitrage Zür Biologie Der Pflanzen , pp. 109-126
    • Schroeter, J.1
  • 16
    • 0031172548 scopus 로고    scopus 로고
    • Biological phosphorus removal by pure culture of Lampropedia spp
    • Stante, L., Cellamare, C. M., Mamaspina, F., Bortone, G., and Tilche, A. (1997) Biological phosphorus removal by pure culture of Lampropedia spp. Water Res., 31, 1317-1324.
    • (1997) Water Res. , vol.31 , pp. 1317-1324
    • Stante, L.1    Cellamare, C.M.2    Mamaspina, F.3    Bortone, G.4    Tilche, A.5
  • 17
    • 1142293665 scopus 로고    scopus 로고
    • PAUP*: Phylogenetic analysis using parsimony (* and other methods), version 4.0, Sinauer Associates, Sunderland, MA
    • Swofford, D. L. (1998) PAUP*: Phylogenetic analysis using parsimony (* and other methods), version 4.0, Sinauer Associates, Sunderland, MA.
    • (1998)
    • Swofford, D.L.1
  • 18
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res., 22, 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 19
    • 0032932359 scopus 로고    scopus 로고
    • Phylogenetic relationships among members of the Comamonadaceae, and description of Delftia acidovorans (den Dooren de Jong 1926 and Tamaoka et al. 1987) gen. nov., comb. nov
    • Wen, A., Fegan, M., Hayward, C., Chakraborty, S., and Sly, L. I. (1999) Phylogenetic relationships among members of the Comamonadaceae, and description of Delftia acidovorans (den Dooren de Jong 1926 and Tamaoka et al. 1987) gen. nov., comb. nov. Int. J. Syst. Bacteriol., 49, 567-576.
    • (1999) Int. J. Syst. Bacteriol. , vol.49 , pp. 567-576
    • Wen, A.1    Fegan, M.2    Hayward, C.3    Chakraborty, S.4    Sly, L.I.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.