-
1
-
-
0029082529
-
Structure of the P1 helix from group I self-splicing introns
-
Allain FH, Varani G. 1995. Structure of the P1 helix from group I self-splicing introns. J Mol Biol 250: 333-353.
-
(1995)
J Mol Biol
, vol.250
, pp. 333-353
-
-
Allain, F.H.1
Varani, G.2
-
2
-
-
0000195671
-
Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopy
-
Bodenhausen G, Ruben DJ. 1980. Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopy. Chem Phys Lett 69: 185-189.
-
(1980)
Chem Phys Lett
, vol.69
, pp. 185-189
-
-
Bodenhausen, G.1
Ruben, D.J.2
-
3
-
-
34547696927
-
Structural basis for aminoglycoside inhibition of bacterial ribosome recycling
-
DOI 10.1038/nsmb1271, PII NSMB1271
-
Borovinskaya MA, Pai RD, Zhang W, Schuwirth BS, Holton JM, Hirokawa G, Kaji H, Kaji A, Cate JH. 2007. Structural basis for aminoglycoside inhibition of bacterial ribosome recycling. Nat Struct Mol Biol 14: 727-732. (Pubitemid 47220057)
-
(2007)
Nature Structural and Molecular Biology
, vol.14
, Issue.8
, pp. 727-732
-
-
Borovinskaya, M.A.1
Pai, R.D.2
Zhang, W.3
Schuwirth, B.S.4
Holton, J.M.5
Hirokawa, G.6
Kaji, H.7
Kaji, A.8
Cate, J.H.D.9
-
4
-
-
0032522280
-
+ mutant-argininamide complex
-
DOI 10.1093/nar/26.8.1991
-
Brodsky AS, Erlacher HA, Williamson JR. 1998. NMR evidence for a base triple in the HIV-2 TAR C-G.C+ mutant-argininamide complex. Nucleic Acids Res 26: 1991-1995. (Pubitemid 28291734)
-
(1998)
Nucleic Acids Research
, vol.26
, Issue.8
, pp. 1991-1995
-
-
Brodsky, A.S.1
Erlacher, H.A.2
Williamson, J.R.3
-
5
-
-
0029869856
-
Solution structure of loop A from the hairpin ribozyme from tobacco ringspot virus satellite
-
DOI 10.1021/bi952985g
-
Cai Z, Tinoco I Jr. 1996. Solution structure of loop A from the hairpin ribozyme from tobacco ringspot virus satellite. Biochemistry 35: 6026-6036. (Pubitemid 26147574)
-
(1996)
Biochemistry
, vol.35
, Issue.19
, pp. 6026-6036
-
-
Cai, Z.1
Tinoco Jr., I.2
-
6
-
-
15544388793
-
Nuclear magnetic resonance structure of the Varkud Satellite ribozyme stem-loop V RNA and magnesium-ion binding from chemical-shift mapping
-
DOI 10.1021/bi047963l
-
Campbell DO, Legault P. 2005. Nuclear magnetic resonance structure of the Varkud satellite ribozyme stem-loop V RNA and magnesium-ion binding from chemical-shift mapping. Biochemistry 44: 4157-4170. (Pubitemid 40403955)
-
(2005)
Biochemistry
, vol.44
, Issue.11
, pp. 4157-4170
-
-
Campbell, D.O.1
Legault, P.2
-
7
-
-
33748264614
-
NMR structure of varkud satellite ribozyme stem-loop V in the presence of magnesium ions and localization of metal-binding sites
-
DOI 10.1021/bi0607150
-
Campbell DO, Bouchard P, Desjardins G, Legault P. 2006. NMR structure of varkud satellite ribozyme stem-loop V in the presence of magnesium ions and localization of metal-binding sites. Biochemistry 45: 10591-10605. (Pubitemid 44320474)
-
(2006)
Biochemistry
, vol.45
, Issue.35
, pp. 10591-10605
-
-
Campbell, D.O.1
Bouchard, P.2
Desjardins, G.3
Legault, P.4
-
8
-
-
84879705616
-
Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo
-
Cash DD, Cohen-Zontag O, Kim N-K, Shefer K, Brown Y, Ulyanov NB, Tzfati Y, Feigon J. 2013. Pyrimidine motif triple helix in the Kluyveromyces lactis telomerase RNA pseudoknot is essential for function in vivo. Proc Natl Acad Sci 110: 10970-10975.
-
(2013)
Proc Natl Acad Sci
, vol.110
, pp. 10970-10975
-
-
Cash, D.D.1
Cohen-Zontag, O.2
Kim, N.-K.3
Shefer, K.4
Brown, Y.5
Ulyanov, N.B.6
Tzfati, Y.7
Feigon, J.8
-
9
-
-
0029820625
-
Crystal structure of a group I ribozyme domain: Principles of RNA packing
-
Cate JH, Gooding AR, Podell E, Zhou K, Golden BL, Kundrot CE, Cech TR, Doudna JA. 1996. Crystal structure of a group I ribozyme domain: principles of RNA packing. Science 273: 1678-1685. (Pubitemid 26317777)
-
(1996)
Science
, vol.273
, Issue.5282
, pp. 1678-1685
-
-
Cate, J.H.1
Gooding, A.R.2
Podell, E.3
Zhou, K.4
Golden, B.L.5
Kundrot, C.E.6
Cech, T.R.7
Doudna, J.A.8
-
11
-
-
33746640534
-
Dissecting non-canonical interactions in frameshift-stimulating mRNA pseudoknots
-
DOI 10.1007/s10858-006-9033-x
-
Cornish PV, Giedroc DP, Hennig M. 2006. Dissecting non-canonical interactions in frameshift-stimulating mRNA pseudoknots. J Biomol NMR 35: 209-223. (Pubitemid 44151640)
-
(2006)
Journal of Biomolecular NMR
, vol.35
, Issue.3
, pp. 209-223
-
-
Cornish, P.V.1
Giedroc, D.P.2
Hennig, M.3
-
12
-
-
0028921811
-
Frequent use of the same tertiary motif by self-folding RNAs
-
Costa M, Michel F. 1995. Frequent use of the same tertiary motif by self-folding RNAs. EMBO J 14: 1276-1285.
-
(1995)
EMBO J
, vol.14
, pp. 1276-1285
-
-
Costa, M.1
Michel, F.2
-
13
-
-
0029645284
-
Hammerhead ribozyme structure: U-turn for RNA structural biology
-
Doudna JA. 1995. Hammerhead ribozyme structure: U-turn for RNA structural biology. Structure 3: 747-750.
-
(1995)
Structure
, vol.3
, pp. 747-750
-
-
Doudna, J.A.1
-
14
-
-
77956026739
-
Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch
-
Duchardt-Ferner E, Weigand JE, Ohlenschläger O, Schmidtke SR, Suess B, Wöhnert J. 2010. Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch. Angew Chem Int Ed Engl 49: 6216-6219.
-
(2010)
Angew Chem Int Ed Engl
, vol.49
, pp. 6216-6219
-
-
Duchardt-Ferner, E.1
Weigand, J.E.2
Ohlenschläger, O.3
Schmidtke, S.R.4
Suess, B.5
Wöhnert, J.6
-
15
-
-
80051743914
-
Rapid identification of noncanonical RNA structure elements by direct detection of OH...O=P, NH...O=P, and NH2...O=P hydrogen bonds in solution NMR spectroscopy
-
Duchardt-Ferner E, Ferner J, Wöhnert J. 2011. Rapid identification of noncanonical RNA structure elements by direct detection of OH...O=P, NH...O=P, and NH2...O=P hydrogen bonds in solution NMR spectroscopy. Angew Chem Int Ed Engl 50: 7927-7930.
-
(2011)
Angew Chem Int Ed Engl
, vol.50
, pp. 7927-7930
-
-
Duchardt-Ferner, E.1
Ferner, J.2
Wöhnert, J.3
-
17
-
-
33845784390
-
A simple NMR analysis of the protonation equilibrium that accompanies aminoglycoside recognition: Dramatic alterations in the neomycin-B protonation state upon binding to a 23-mer RNA aptamer
-
DOI 10.1039/b611597g
-
Freire F, Cuesta I, Corzana F, Revuelta J, Gonzalez C, Hricovini M, Bastida A, Jimenez-Barbero J, Asensio JL. 2007. A simple NMR analysis of the protonation equilibrium that accompanies aminoglycoside recognition: dramatic alterations in the neomycin-B protonation state upon binding to a 23-mer RNA aptamer. Chem Commun (Camb) 2: 174-176. (Pubitemid 44974579)
-
(2007)
Chemical Communications
, Issue.2
, pp. 174-176
-
-
Freire, F.1
Cuesta, I.2
Corzana, F.3
Revuelta, J.4
Gonzalez, C.5
Hricovini, M.6
Bastida, A.7
Jimenez-Barbero, J.8
Asensio, J.L.9
-
18
-
-
17144452674
-
NMR spectroscopy of RNA
-
DOI 10.1002/cbic.200300700
-
Fürtig B, Richter C, Wöhnert J, Schwalbe H. 2003. NMR spectroscopy of RNA. Chembiochem 4: 936-962. (Pubitemid 37267582)
-
(2003)
ChemBioChem
, vol.4
, Issue.10
, pp. 936-962
-
-
Furtig, B.1
Richter, C.2
Wohnert, J.3
Schwalbe, H.4
-
19
-
-
10744232623
-
New NMR experiments for RNA nucleobase resonance assignment and chemical shift analysis of an RNA UUCG tetraloop
-
DOI 10.1023/B:JNMR.0000012863.63522.1f
-
Fürtig B, Richter C, Bermel W, Schwalbe H. 2004. New NMR experiments for RNA nucleobase resonance assignment and chemical shift analysis of an RNA UUCG tetraloop. J Biomol NMR 28: 69-79. (Pubitemid 38220161)
-
(2004)
Journal of Biomolecular NMR
, vol.28
, Issue.1
, pp. 69-79
-
-
Furtig, B.1
Richter, C.2
Bermel, W.3
Schwalbe, H.4
-
20
-
-
44949280676
-
Band-selective radiofrequency pulses
-
Geen H, Freeman R. 1991. Band-selective radiofrequency pulses. J Magn Reson 93: 93-141.
-
(1991)
J Magn Reson
, vol.93
, pp. 93-141
-
-
Geen, H.1
Freeman, R.2
-
22
-
-
0034697987
-
Predicting U-turns in ribosomal RNA with comparative sequence analysis
-
Gutell RR, Cannone JJ, Konings D, Gautheret D. 2000. Predicting U-turns in ribosomal RNA with comparative sequence analysis. J Mol Biol 300: 791-803.
-
(2000)
J Mol Biol
, vol.300
, pp. 791-803
-
-
Gutell, R.R.1
Cannone, J.J.2
Konings, D.3
Gautheret, D.4
-
23
-
-
0029942301
-
Structural features and stability of an RNA triple helix in solution
-
DOI 10.1093/nar/24.14.2841
-
Holland JA, Hoffman DW. 1996. Structural features and stability of an RNA triple helix in solution. Nucleic Acids Res 24: 2841-2848. (Pubitemid 26239758)
-
(1996)
Nucleic Acids Research
, vol.24
, Issue.14
, pp. 2841-2848
-
-
Holland, J.A.1
Hoffman, D.W.2
-
24
-
-
0029998660
-
Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAs
-
DOI 10.1006/jmbi.1996.0252
-
Huang S, Wang YX, Draper DE. 1996. Structure of a hexanucleotide RNA hairpin loop conserved in ribosomal RNAs. J Mol Biol 258: 308-321. (Pubitemid 26131734)
-
(1996)
Journal of Molecular Biology
, vol.258
, Issue.2
, pp. 308-321
-
-
Huang, S.1
Wang, Y.-X.2
Draper, D.E.3
-
25
-
-
0036263869
-
Metal binding and base ionization in the U6 RNA intramolecular stem-loop structure
-
DOI 10.1038/nsb800
-
Huppler A, Nikstad LJ, Allmann AM, Brow DA, Butcher SE. 2002. Metal binding and base ionization in the U6 RNA intramolecular stem-loop structure. Nat Struct Biol 9: 431-435. (Pubitemid 34568787)
-
(2002)
Nature Structural Biology
, vol.9
, Issue.6
, pp. 431-435
-
-
Huppler, A.1
Nikstad, L.J.2
Allmann, A.M.3
Brow, D.A.4
Butcher, S.E.5
-
26
-
-
0028866812
-
Solution structure of the CUUG hairpin loop: A novel RNA tetraloop motif
-
Jucker FM, Pardi A. 1995a. Solution structure of the CUUG hairpin loop: a novel RNA tetraloop motif. Biochemistry 34: 14416-14427.
-
(1995)
Biochemistry
, vol.34
, pp. 14416-14427
-
-
Jucker, F.M.1
Pardi, A.2
-
27
-
-
0029283999
-
GNRA tetraloops make a U-turn
-
Jucker FM, Pardi A. 1995b. GNRA tetraloops make a U-turn. RNA 1: 219-222.
-
(1995)
RNA
, vol.1
, pp. 219-222
-
-
Jucker, F.M.1
Pardi, A.2
-
28
-
-
0030596092
-
A network of heterogeneous hydrogen bonds in GNRA tetraloops
-
DOI 10.1006/jmbi.1996.0690
-
Jucker FM, Heus HA, Yip PF, Moors EH, Pardi A. 1996. A network of heterogeneous hydrogen bonds in GNRA tetraloops. J Mol Biol 264: 968-980. (Pubitemid 27019486)
-
(1996)
Journal of Molecular Biology
, vol.264
, Issue.5
, pp. 968-980
-
-
Jucker, F.M.1
Heus, H.A.2
Yip, P.F.3
Moors, E.H.M.4
Pardi, A.5
-
29
-
-
0035423087
-
The kink-turn: A new RNA secondary structure motif
-
DOI 10.1093/emboj/20.15.4214
-
Klein DJ, Schmeing TM, Moore PB, Steitz TA. 2001. The kink-turn: a new RNA secondary structure motif. EMBO J 20: 4214-4221. (Pubitemid 32751837)
-
(2001)
EMBO Journal
, vol.20
, Issue.15
, pp. 4214-4221
-
-
Klein, D.J.1
Schmeing, T.M.2
Moore, P.B.3
Steitz, T.A.4
-
30
-
-
2942615089
-
The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit
-
DOI 10.1016/j.jmb.2004.03.076, PII S0022283604003845
-
Klein DJ, Moore PB, Steitz TA. 2004. The roles of ribosomal proteins in the structure assembly, and evolution of the large ribosomal subunit. J Mol Biol 340: 141-177. (Pubitemid 38739442)
-
(2004)
Journal of Molecular Biology
, vol.340
, Issue.1
, pp. 141-177
-
-
Klein, D.J.1
Moore, P.B.2
Steitz, T.A.3
-
31
-
-
0016294094
-
Conservation of the molecular structure of yeast phenylalanine transfer RNA in two crystal forms
-
Klug A, Robertus JD, Ladner JE, Brown RS, Finch JT. 1974. Conservation of the molecular structure of yeast phenylalanine transfer RNA in two crystal forms. Proc Natl Acad Sci 71: 3711-3715.
-
(1974)
Proc Natl Acad Sci
, vol.71
, pp. 3711-3715
-
-
Klug, A.1
Robertus, J.D.2
Ladner, J.E.3
Brown, R.S.4
Finch, J.T.5
-
32
-
-
48349090037
-
Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding
-
Kurata S, Weixlbaumer A, Ohtsuki T, Shimazaki T, Wada T, Kirino Y, Takai K, Watanabe K, Ramakrishnan V, Suzuki T. 2008. Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding. J Biol Chem 283: 18801-18811.
-
(2008)
J Biol Chem
, vol.283
, pp. 18801-18811
-
-
Kurata, S.1
Weixlbaumer, A.2
Ohtsuki, T.3
Shimazaki, T.4
Wada, T.5
Kirino, Y.6
Takai, K.7
Watanabe, K.8
Ramakrishnan, V.9
Suzuki, T.10
-
34
-
-
0030747007
-
a shift at the active site of a lead-dependent ribozyme
-
a shift at the active site of a lead-dependent ribozyme. J Am Chem Soc 119: 6621-6628.
-
(1997)
J Am Chem Soc
, vol.119
, pp. 6621-6628
-
-
Legault, P.1
Pardi, A.2
-
35
-
-
0024292414
-
Characterization of base-pair opening in deoxynucleotide duplexes using catalyzed exchange of the imino proton
-
Leroy JL, Kochoyan M, Huynh-Dinh T, Gueron M. 1988. Characterization of base-pair opening in deoxynucleotide duplexes using catalyzed exchange of the imino proton. J Mol Biol 200: 223-238.
-
(1988)
J Mol Biol
, vol.200
, pp. 223-238
-
-
Leroy, J.L.1
Kochoyan, M.2
Huynh-Dinh, T.3
Gueron, M.4
-
36
-
-
84859986489
-
The nature of hydrogen bonds in cytidine...H+...Cytidine DNA base pairs
-
Lieblein AL, Kramer M, Dreuw A, Fürtig B, Schwalbe H. 2012. The nature of hydrogen bonds in cytidine...H+...cytidine DNA base pairs. Angew Chem Int Ed Engl 51: 4067-4070.
-
(2012)
Angew Chem Int Ed Engl
, vol.51
, pp. 4067-4070
-
-
Lieblein, A.L.1
Kramer, M.2
Dreuw, A.3
Fürtig, B.4
Schwalbe, H.5
-
37
-
-
34247382075
-
A U-turn motif-containing stem-loop in the coronavirus 5′ untranslated region plays a functional role in replication
-
DOI 10.1261/rna.261807
-
Liu P, Li L, Millership JJ, Kang H, Leibowitz JL, Giedroc DP. 2007. A U-turn motif-containing stem-loop in the coronavirus 5′ untranslated region plays a functional role in replication. RNA 13: 763-780. (Pubitemid 46641536)
-
(2007)
RNA
, vol.13
, Issue.5
, pp. 763-780
-
-
Liu, P.1
Li, L.2
Millership, J.J.3
Kang, H.4
Leibowitz, J.L.5
Giedroc, D.P.6
-
38
-
-
0040518458
-
Detection of scalar couplings across NH⋯OP and OH⋯OP hydrogen bonds in a flavoprotein
-
Löhr F, Mayhew SG, Rüterjans H. 2000. Detection of scalar couplings across NH⋯OP and OH⋯OP hydrogen bonds in a flavoprotein. J Am Chem Soc 122: 9289-9295.
-
(2000)
J Am Chem Soc
, vol.122
, pp. 9289-9295
-
-
Löhr, F.1
Mayhew, S.G.2
Rüterjans, H.3
-
39
-
-
0035812381
-
a measurement of the active-site cytosine in a genomic hepatitis delta virus ribozyme
-
DOI 10.1021/ja016091x
-
Lupták A, Ferré-D'Amaré AR, Zhou K, Zilm KW, Doudna JA. 2001. Direct pKa measurement of the active-site cytosine in a genomic hepatitis δ virus ribozyme. J Am Chem Soc 123: 8447-8452. (Pubitemid 32808069)
-
(2001)
Journal of the American Chemical Society
, vol.123
, Issue.35
, pp. 8447-8452
-
-
Luptak, A.1
Ferre-D'Amare, A.R.2
Zhou, K.3
Zilm, K.W.4
Doudna, J.A.5
-
40
-
-
0035896014
-
Structure and function of the conserved 690 hairpin in Escherichia coli 16 S ribosomal RNA. III. Functional analysis of the 690 loop
-
DOI 10.1006/jmbi.2000.4432
-
Morosyuk SV, SantaLucia J Jr, Cunningham PR. 2001. Structure and function of the conserved 690 hairpin in Escherichia coli 16 S ribosomal RNA. III. Functional analysis of the 690 loop. J Mol Biol 307: 213-228. (Pubitemid 33029977)
-
(2001)
Journal of Molecular Biology
, vol.307
, Issue.1
, pp. 213-228
-
-
Morosyuk, S.V.1
SantaLucia Jr., J.2
Cunningham, P.R.3
-
41
-
-
0036717041
-
Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs
-
DOI 10.1017/S135583820202006X
-
Nagaswamy U, Fox GE. 2002. Frequent occurrence of the T-loop RNA folding motif in ribosomal RNAs. RNA 8: 1112-1119. (Pubitemid 35024567)
-
(2002)
RNA
, vol.8
, Issue.9
, pp. 1112-1119
-
-
Nagaswamy, U.1
Fox, G.E.2
-
42
-
-
0035945256
-
NMR structure of a ribosomal RNA hairpin containing a conserved CUCAA pentaloop
-
Nagaswamy U, Gao X, Martinis SA, Fox GE. 2001. NMR structure of a ribosomal RNA hairpin containing a conserved CUCAA pentaloop. Nucleic Acids Res 29: 5129-5139. (Pubitemid 34065431)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.24
, pp. 5129-5139
-
-
Nagaswamy, U.1
Gao, X.2
Martinis, S.A.3
Fox, G.E.4
-
43
-
-
79952177284
-
Transient Hoogsteen base pairs in canonical duplex DNA
-
Nikolova EN, Kim E, Wise AA, O'Brien PJ, Andricioaei I, Al-Hashimi HM. 2011. Transient Hoogsteen base pairs in canonical duplex DNA. Nature 470: 498-502.
-
(2011)
Nature
, vol.470
, pp. 498-502
-
-
Nikolova, E.N.1
Kim, E.2
Wise, A.A.3
O'Brien, P.J.4
Andricioaei, I.5
Al-Hashimi, H.M.6
-
44
-
-
0035942248
-
RNA tertiary interactions in the large ribosomal subunit: The A-minor motif
-
DOI 10.1073/pnas.081082398
-
Nissen P, Ippolito JA, Ban N, Moore PB, Steitz TA. 2001. RNA tertiary interactions in the large ribosomal subunit: the A-minor motif. Proc Natl Acad Sci 98: 4899-4903. (Pubitemid 32397054)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.9
, pp. 4899-4903
-
-
Nissen, P.1
Ippolito, J.A.2
Ban, N.3
Moore, P.B.4
Steitz, T.A.5
-
45
-
-
0037183520
-
Thermodynamic analysis of conserved loop-stem interactions in P1-P2 frameshifting RNA pseudoknots from plant Luteoviridae
-
DOI 10.1021/bi025843c
-
Nixon P, Cornish PV, Suram SV, Giedroc DP. 2002a. Thermodynamic analysis of conserved loop-stem interactions in P1-P2 frameshifting RNA pseudoknots from plant Luteoviridae. Biochemistry 41: 10665-10674. (Pubitemid 34913326)
-
(2002)
Biochemistry
, vol.41
, Issue.34
, pp. 10665-10674
-
-
Nixon, P.L.1
Cornish, P.V.2
Suram, S.V.3
Giedroc, D.P.4
-
46
-
-
0036385783
-
Solution structure of a luteoviral P1-P2 frameshifting mRNA pseudoknot
-
Nixon P, Rangan A, Kim YG, Rich A, Hoffman DW, Hennig M, Giedroc DP. 2002b. Solution structure of a luteoviral P1-P2 frameshifting mRNA pseudoknot. J Mol Biol 322: 621-633.
-
(2002)
J Mol Biol
, vol.322
, pp. 621-633
-
-
Nixon, P.1
Rangan, A.2
Kim, Y.G.3
Rich, A.4
Hoffman, D.W.5
Hennig, M.6
Giedroc, D.P.7
-
47
-
-
0028063567
-
Three-dimensional structure of a hammerhead ribozyme
-
DOI 10.1038/372068a0
-
Pley HW, Flaherty KM, McKay DB. 1994. Three-dimensional structure of a hammerhead ribozyme. Nature 372: 68-74. (Pubitemid 24339485)
-
(1994)
Nature
, vol.372
, Issue.6501
, pp. 68-74
-
-
Pley, H.W.1
Flaherty, K.M.2
McKay, D.B.3
-
48
-
-
0031761536
-
HIV-1 A-rich RNA loop mimics the tRNA anticodon structure
-
DOI 10.1038/4141
-
Puglisi EV, Puglisi JD. 1998. HIV-1 A-rich RNA loop mimics the tRNA anticodon structure. Nat Struct Biol 5: 1033-1036. (Pubitemid 28546264)
-
(1998)
Nature Structural Biology
, vol.5
, Issue.12
, pp. 1033-1036
-
-
Puglisi, E.V.1
Puglisi, J.D.2
-
49
-
-
0017182937
-
Structural domains of transfer RNA molecules
-
Quigley GJ, Rich A. 1976. Structural domains of transfer RNA molecules. Science 194: 796-806.
-
(1976)
Science
, vol.194
, pp. 796-806
-
-
Quigley, G.J.1
Rich, A.2
-
50
-
-
0029948820
-
A long-range pseudoknot is required for activity of the Neurospora VS ribozyme
-
Rastogi T, Beattie TL, Olive JE, Collins RA. 1996. A long-range pseudoknot is required for activity of the Neurospora VS ribozyme. EMBO J 15: 2820-2825. (Pubitemid 26176259)
-
(1996)
EMBO Journal
, vol.15
, Issue.11
, pp. 2820-2825
-
-
Rastogi, T.1
Beattie, T.L.2
Olive, J.E.3
Collins, R.A.4
-
51
-
-
0034719109
-
Adenine protonation in domain B of the hairpin ribozyme
-
DOI 10.1021/bi001976r
-
Ravindranathan S, Butcher SE, Feigon J. 2000. Adenine protonation in domain B of the hairpin ribozyme. Biochemistry 39: 16026-16032. (Pubitemid 32038265)
-
(2000)
Biochemistry
, vol.39
, Issue.51
, pp. 16026-16032
-
-
Ravindranathan, S.1
Butcher, S.E.2
Feigon, J.3
-
52
-
-
77954360115
-
Direct observation of the temperature-induced melting process of the Salmonella fourU RNA thermometer at base-pair resolution
-
Rinnenthal J, Klinkert B, Narberhaus F, Schwalbe H. 2010. Direct observation of the temperature-induced melting process of the Salmonella fourU RNA thermometer at base-pair resolution. Nucleic Acids Res 38: 3834-3847.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3834-3847
-
-
Rinnenthal, J.1
Klinkert, B.2
Narberhaus, F.3
Schwalbe, H.4
-
53
-
-
77951879579
-
NMR resonance assignments of an engineered neomycin-sensing riboswitch RNA bound to ribostamycin and tobramycin
-
Schmidtke SR, Duchardt-Ferner E, Weigand JE, Suess B, Wöhnert J. 2010. NMR resonance assignments of an engineered neomycin-sensing riboswitch RNA bound to ribostamycin and tobramycin. Biomol NMR Assign 4: 115-118.
-
(2010)
Biomol NMR Assign
, vol.4
, pp. 115-118
-
-
Schmidtke, S.R.1
Duchardt-Ferner, E.2
Weigand, J.E.3
Suess, B.4
Wöhnert, J.5
-
55
-
-
0031572279
-
The structure of an essential splicing element: Stem loop IIa from yeast U2 snRNA
-
Stallings SC, Moore PB. 1997. The structure of an essential splicing element: stem-loop IIa from yeast U2 snRNA. Structure 5: 1173-1185. (Pubitemid 27416025)
-
(1997)
Structure
, vol.5
, Issue.9
, pp. 1173-1185
-
-
Stallings, S.C.1
Moore, P.B.2
-
57
-
-
38049004429
-
Screening for engineered neomycin riboswitches that control translation initiation
-
Weigand JE, Sanchez M, Gunnesch EB, Zeiher S, Schröder R, Suess B. 2008. Screening for engineered neomycin riboswitches that control translation initiation. RNA 14: 89-97.
-
(2008)
RNA
, vol.14
, pp. 89-97
-
-
Weigand, J.E.1
Sanchez, M.2
Gunnesch, E.B.3
Zeiher, S.4
Schröder, R.5
Suess, B.6
-
58
-
-
79955613663
-
Mechanistic insights into an engineered riboswitch: A switching element which confers riboswitch activity
-
Weigand JE, Schmidtke SR, Will TJ, Duchardt-Ferner E, Hammann C, Wöhnert J, Suess B. 2011. Mechanistic insights into an engineered riboswitch: a switching element which confers riboswitch activity. Nucleic Acids Res 39: 3363-3372.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 3363-3372
-
-
Weigand, J.E.1
Schmidtke, S.R.2
Will, T.J.3
Duchardt-Ferner, E.4
Hammann, C.5
Wöhnert, J.6
Suess, B.7
-
59
-
-
84904598840
-
Sequence elements distal to the ligand binding pocket modulate the efficiency of a synthetic riboswitch
-
doi: 10.1002/cbic.201402067
-
Weigand JE, Gottstein-Schmidtke SR, Demolli S, Groher F, Duchardt-Ferner E, Wöhnert J, Suess B. 2014. Sequence elements distal to the ligand binding pocket modulate the efficiency of a synthetic riboswitch. ChemBioChem doi: 10.1002/cbic.201402067.
-
(2014)
ChemBioChem
-
-
Weigand, J.E.1
Gottstein-Schmidtke, S.R.2
Demolli, S.3
Groher, F.4
Duchardt-Ferner, E.5
Wöhnert, J.6
Suess, B.7
-
61
-
-
80155168200
-
Charged nucleobases and their potential for RNA catalysis
-
Wilcox JL, Ahluwalia AK, Bevilacqua PC. 2011. Charged nucleobases and their potential for RNA catalysis. Acc Chem Res 44: 1270-1279.
-
(2011)
Acc Chem Res
, vol.44
, pp. 1270-1279
-
-
Wilcox, J.L.1
Ahluwalia, A.K.2
Bevilacqua, P.C.3
-
62
-
-
0028533989
-
A common RNA loop motif as a docking module and its function in the hammerhead ribozyme
-
Wimberly B. 1994. A common RNA loop motif as a docking module and its function in the hammerhead ribozyme. Nat Struct Biol 1: 820-827.
-
(1994)
Nat Struct Biol
, vol.1
, pp. 820-827
-
-
Wimberly, B.1
-
63
-
-
0027439912
-
The conformation of loop E of eukaryotic 5S ribosomal RNA
-
DOI 10.1021/bi00055a013
-
Wimberly B, Varani G, Tinoco I Jr. 1993. The conformation of loop E of eukaryotic 5S ribosomal RNA. Biochemistry 32: 1078-1087. (Pubitemid 23057683)
-
(1993)
Biochemistry
, vol.32
, Issue.4
, pp. 1078-1087
-
-
Wimberly, B.1
Varani, G.2
Tinoco Jr., I.3
-
64
-
-
0025047647
-
Architecture of ribosomal RNA: Constraints on the sequence of "tetra-loops"
-
Woese CR, Winker S, Gutell RR. 1990. Architecture of ribosomal RNA: constraints on the sequence of "tetra-loops". Proc Natl Acad Sci 87: 8467-8471.
-
(1990)
Proc Natl Acad Sci
, vol.87
, pp. 8467-8471
-
-
Woese, C.R.1
Winker, S.2
Gutell, R.R.3
-
65
-
-
0035928804
-
Structural characterization of a six-nucleotide RNA hairpin loop found in Escherichia coli, r(UUAAGU)
-
DOI 10.1021/bi011226x
-
Zhang H, Fountain MA, Krugh TR. 2001. Structural characterization of a six-nucleotide RNA hairpin loop found in Escherichia coli, r(UUAAGU). Biochemistry 40: 9879-9886. (Pubitemid 32769536)
-
(2001)
Biochemistry
, vol.40
, Issue.33
, pp. 9879-9886
-
-
Zhang, H.1
Fountain, M.A.2
Krugh, T.R.3
-
66
-
-
69849114530
-
Classification and energetics of the base-phosphate interactions in RNA
-
Zirbel CL, Sponer JE, Sponer J, Stombaugh J, Leontis NB. 2009. Classification and energetics of the base-phosphate interactions in RNA. Nucleic Acids Res 37: 4898-4918.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 4898-4918
-
-
Zirbel, C.L.1
Sponer, J.E.2
Sponer, J.3
Stombaugh, J.4
Leontis, N.B.5
|