메뉴 건너뛰기




Volumn 57, Issue 13, 2014, Pages 5693-5701

Undecaprenyl diphosphate synthase inhibitors: Antibacterial drug leads

Author keywords

[No Author keywords available]

Indexed keywords

ANTIBIOTIC AGENT; ENZYME INHIBITOR; EPALRESTAT; METICILLIN; PYROPHOSPHATE; TRANSFERASE; UNCLASSIFIED DRUG; UNDECAPRENYL DIPHOSPHATE SYNTHASE INHIBITOR;

EID: 84904325067     PISSN: 00222623     EISSN: 15204804     Source Type: Journal    
DOI: 10.1021/jm5004649     Document Type: Article
Times cited : (40)

References (29)
  • 1
    • 69549111337 scopus 로고    scopus 로고
    • Antibiotics for emerging pathogens
    • Fischbach, M. A.; Walsh, C. T. Antibiotics for emerging pathogens Science 2009, 325, 1089-1093
    • (2009) Science , vol.325 , pp. 1089-1093
    • Fischbach, M.A.1    Walsh, C.T.2
  • 2
    • 79959740064 scopus 로고    scopus 로고
    • Antibiotics in the clinical pipeline in 2011
    • Butler, M. S.; Cooper, M. A. Antibiotics in the clinical pipeline in 2011 J. Antibiot. 2011, 64, 413-425
    • (2011) J. Antibiot. , vol.64 , pp. 413-425
    • Butler, M.S.1    Cooper, M.A.2
  • 3
    • 37349041697 scopus 로고    scopus 로고
    • Lipid intermediates in the biosynthesis of bacterial peptidoglycan
    • DOI 10.1128/MMBR.00016-07
    • van Heijenoort, J. Lipid intermediates in the biosynthesis of bacterial peptidoglycan Microbiol. Mol. Biol. Rev. 2007, 71, 620-635 (Pubitemid 350309180)
    • (2007) Microbiology and Molecular Biology Reviews , vol.71 , Issue.4 , pp. 620-635
    • Van Heijenoort, J.1
  • 4
    • 0345313624 scopus 로고    scopus 로고
    • Use of genomics to identify bacterial undecaprenyl pyrophosphate synthetase: Cloning, expression, and characterization of the essential uppS gene
    • Apfel, C. M.; Takacs, B.; Fountoulakis, M.; Stieger, M.; Keck, W. Use of genomics to identify bacterial undecaprenyl pyrophosphate synthetase: cloning, expression, and characterization of the essential uppS gene J. Bacteriol. 1999, 181, 483-492 (Pubitemid 29045139)
    • (1999) Journal of Bacteriology , vol.181 , Issue.2 , pp. 483-492
    • Apfel, C.M.1    Takacs, B.2    Fountoulakis, M.3    Stieger, M.4    Keck, W.5
  • 5
    • 33845903833 scopus 로고    scopus 로고
    • Drugs for bad bugs: Confronting the challenges of antibacterial discovery
    • DOI 10.1038/nrd2201, PII NRD2201
    • Payne, D. J.; Gwynn, M. N.; Holmes, D. J.; Pompliano, D. L. Drugs for bad bugs: confronting the challenges of antibacterial discovery Nat. Rev. Drug Discovery 2007, 6, 29-40 (Pubitemid 46020284)
    • (2007) Nature Reviews Drug Discovery , vol.6 , Issue.1 , pp. 29-40
    • Payne, D.J.1    Gwynn, M.N.2    Holmes, D.J.3    Pompliano, D.L.4
  • 6
    • 40749124827 scopus 로고    scopus 로고
    • Design and structure-activity relationships of potent and selective inhibitors of undecaprenyl pyrophosphate synthase (UPPS): Tetramic, tetronic acids and dihydropyridin-2-ones
    • DOI 10.1016/j.bmcl.2008.02.009, PII S0960894X08001893
    • Peukert, S.; Sun, Y.; Zhang, R.; Hurley, B.; Sabio, M.; Shen, X.; Gray, C.; Dzink-Fox, J.; Tao, J.; Cebula, R.; Wattanasin, S. Design and structure-activity relationships of potent and selective inhibitors of undecaprenyl pyrophosphate synthase (UPPS): tetramic, tetronic acids and dihydropyridin-2-ones Bioorg. Med. Chem. Lett. 2008, 18, 1840-1844 (Pubitemid 351380899)
    • (2008) Bioorganic and Medicinal Chemistry Letters , vol.18 , Issue.6 , pp. 1840-1844
    • Peukert, S.1    Sun, Y.2    Zhang, R.3    Hurley, B.4    Sabio, M.5    Shen, X.6    Gray, C.7    Dzink-Fox, J.8    Tao, J.9    Cebula, R.10    Wattanasin, S.11
  • 13
  • 16
    • 84880529288 scopus 로고    scopus 로고
    • Protein and ligand preparation: Parameters, protocols, and influence on virtual screening enrichments
    • Sastry, G. M.; Adzhigirey, M.; Day, T.; Annabhimoju, R.; Sherman, W. Protein and ligand preparation: parameters, protocols, and influence on virtual screening enrichments J. Comput.-Aided Mol. Des. 2013, 27, 221-234
    • (2013) J. Comput.-Aided Mol. Des. , vol.27 , pp. 221-234
    • Sastry, G.M.1    Adzhigirey, M.2    Day, T.3    Annabhimoju, R.4    Sherman, W.5
  • 18
    • 77956276766 scopus 로고    scopus 로고
    • Analysis and comparison of 2D fingerprints: Insights into database screening performance using eight fingerprint methods
    • Duan, J.; Dixon, S. L.; Lowrie, J. F.; Sherman, W. Analysis and comparison of 2D fingerprints: insights into database screening performance using eight fingerprint methods J. Mol. Graphics Modell. 2010, 29, 157-170
    • (2010) J. Mol. Graphics Modell. , vol.29 , pp. 157-170
    • Duan, J.1    Dixon, S.L.2    Lowrie, J.F.3    Sherman, W.4
  • 19
    • 77952780755 scopus 로고    scopus 로고
    • Large-scale systematic analysis of 2D fingerprint methods and parameters to improve virtual screening enrichments
    • Sastry, M.; Lowrie, J. F.; Dixon, S. L.; Sherman, W. Large-scale systematic analysis of 2D fingerprint methods and parameters to improve virtual screening enrichments J. Chem. Inf. Model. 2010, 50, 771-784
    • (2010) J. Chem. Inf. Model. , vol.50 , pp. 771-784
    • Sastry, M.1    Lowrie, J.F.2    Dixon, S.L.3    Sherman, W.4
  • 20
    • 0026684153 scopus 로고
    • A continuous spectrophotometric assay for inorganic phosphate and for measuring phosphate release kinetics in biological systems
    • Webb, M. R. A continuous spectrophotometric assay for inorganic phosphate and for measuring phosphate release kinetics in biological systems Proc. Natl. Acad. Sci. U.S.A. 1992, 89, 4884-4887
    • (1992) Proc. Natl. Acad. Sci. U.S.A. , vol.89 , pp. 4884-4887
    • Webb, M.R.1
  • 21
    • 3242701485 scopus 로고    scopus 로고
    • The effect of triton concentration on the activity of undecaprenyl pyrophosphate synthase inhibitors
    • Li, H.; Huang, J.; Jiang, X.; Seefeld, M.; McQueney, M.; Macarron, R. The effect of triton concentration on the activity of undecaprenyl pyrophosphate synthase inhibitors J. Biomol. Screening 2003, 8, 712-715
    • (2003) J. Biomol. Screening , vol.8 , pp. 712-715
    • Li, H.1    Huang, J.2    Jiang, X.3    Seefeld, M.4    McQueney, M.5    Macarron, R.6
  • 22
    • 84858656036 scopus 로고    scopus 로고
    • Structure determination and interception of biosynthetic intermediates for the plantazolicin class of highly discriminating antibiotics
    • Molohon, K. J.; Melby, J. O.; Lee, J.; Evans, B. S.; Dunbar, K. L.; Bumpus, S. B.; Kelleher, N. L.; Mitchell, D. A. Structure determination and interception of biosynthetic intermediates for the plantazolicin class of highly discriminating antibiotics ACS Chem. Biol. 2011, 6, 1307-1313
    • (2011) ACS Chem. Biol. , vol.6 , pp. 1307-1313
    • Molohon, K.J.1    Melby, J.O.2    Lee, J.3    Evans, B.S.4    Dunbar, K.L.5    Bumpus, S.B.6    Kelleher, N.L.7    Mitchell, D.A.8
  • 23
    • 33845473042 scopus 로고    scopus 로고
    • Isoprenoid biosynthesis as a drug target: Bisphosphonate inhibition of Escherichia coli K12 growth and synergistic effects of fosmidomycin
    • DOI 10.1021/jm060492b
    • Leon, A.; Liu, L.; Yang, Y.; Hudock, M. P.; Hall, P.; Yin, F.; Studer, D.; Puan, K.-J.; Morita, C. T.; Oldfield, E. Isoprenoid biosynthesis as a drug target: bisphosphonate inhibition of Escherichia coli K12 growth and synergistic effects of fosmidomycin J. Med. Chem. 2006, 49, 7331-7341 (Pubitemid 44913394)
    • (2006) Journal of Medicinal Chemistry , vol.49 , Issue.25 , pp. 7331-7341
    • Leon, A.1    Liu, L.2    Yang, Y.3    Hudock, M.P.4    Hall, P.5    Yin, F.6    Studer, D.7    Puan, K.-J.8    Morita, C.T.9    Oldfield, E.10
  • 24
    • 79955967681 scopus 로고    scopus 로고
    • Applying molecular dynamics simulations to identify rarely sampled ligand bound conformational states of undecaprenyl pyrophosphate synthase, an antibacterial target
    • Sinko, W.; de Oliveira, C.; Williams, S.; Van Wynsberghe, A.; Durrant, J. D.; Cao, R.; Oldfield, E.; Andrew McCammon, J. Applying molecular dynamics simulations to identify rarely sampled ligand bound conformational states of undecaprenyl pyrophosphate synthase, an antibacterial target Chem. Biol. Drug Des. 2011, 77, 412-420
    • (2011) Chem. Biol. Drug Des. , vol.77 , pp. 412-420
    • Sinko, W.1    De Oliveira, C.2    Williams, S.3    Van Wynsberghe, A.4    Durrant, J.D.5    Cao, R.6    Oldfield, E.7    Andrew McCammon, J.8
  • 25
    • 17144385534 scopus 로고    scopus 로고
    • Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4
    • DOI 10.1021/jm049092j
    • Triballeau, N.; Acher, F.; Brabet, I.; Pin, J.-P.; Bertrand, H.-O. Virtual screening workflow development guided by the "receiver operating characteristic" curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4 J. Med. Chem. 2005, 48, 2534-2547 (Pubitemid 40520517)
    • (2005) Journal of Medicinal Chemistry , vol.48 , Issue.7 , pp. 2534-2547
    • Triballeau, N.1    Acher, F.2    Brabet, I.3    Pin, J.-P.4    Bertrand, H.-O.5
  • 26
    • 84855925739 scopus 로고    scopus 로고
    • How to benchmark methods for structure-based virtual screening of large compound libraries
    • Christofferson, A. J.; Huang, N. How to benchmark methods for structure-based virtual screening of large compound libraries Methods Mol. Biol. 2012, 819, 187-195
    • (2012) Methods Mol. Biol. , vol.819 , pp. 187-195
    • Christofferson, A.J.1    Huang, N.2
  • 27
    • 42949097094 scopus 로고    scopus 로고
    • Epalrestat: An aldose reductase inhibitor for the treatment of diabetic neuropathy
    • Ramirez, M. A.; Borja, N. L. Epalrestat: an aldose reductase inhibitor for the treatment of diabetic neuropathy Pharmacotherapy 2008, 28, 646-645
    • (2008) Pharmacotherapy , vol.28 , pp. 646-645
    • Ramirez, M.A.1    Borja, N.L.2
  • 28
    • 77950571108 scopus 로고    scopus 로고
    • New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays
    • Baell, J. B.; Holloway, G. A. New substructure filters for removal of pan assay interference compounds (PAINS) from screening libraries and for their exclusion in bioassays J. Med. Chem. 2010, 53, 2719-2740
    • (2010) J. Med. Chem. , vol.53 , pp. 2719-2740
    • Baell, J.B.1    Holloway, G.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.