Structure of arginine overlayers at the aqueous gold interface: Implications for nanoparticle assembly

ACS Applied Materials and Interfaces

Volumn 6, Issue 13, 2014, Pages 10524-10533

  Wright, Louise B ^a   Merrill, Nicholas A ^b   Knecht, Marc R ^b   Walsh, Tiffany R ^c  

^a UNIVERSITY OF WARWICK   (United Kingdom)

^b University of Miami   (United States)

^c DEAKIN UNIVERSITY   (Australia)

Author keywords

arginine; assembly; gold; nanoparticles; simulation

Indexed keywords

ASSEMBLY; EXPERIMENTS; GOLD; HYDROGEN BONDS; LIGANDS; METAL NANOPARTICLES; NANOPARTICLES;

AMINO ACID ARGININE; CONSTANT COMPOSITION; ELECTROSTATIC REPULSION; ENERGETIC CHARACTERISTICS; EXPERIMENTAL CHARACTERIZATION; MOLECULAR SIMULATIONS; NANOPARTICLE ASSEMBLIES; SIMULATION;

ARGININE;

ARGININE; GOLD; METAL NANOPARTICLE;

CHEMISTRY; TRANSMISSION ELECTRON MICROSCOPY; ULTRAVIOLET SPECTROPHOTOMETRY;

ARGININE; GOLD; METAL NANOPARTICLES; MICROSCOPY, ELECTRON, TRANSMISSION; SPECTROPHOTOMETRY, ULTRAVIOLET;

EID: 84904109976     PISSN: 19448244     EISSN: 19448252     Source Type: Journal    
DOI: 10.1021/am502119g     Document Type: Article

References (51)

1. Daniel, M. C.; Astruc, D. Gold Nanoparticles: Assembly, Supramolecular Chemistry and Quantum-size-related Properties, and Applications Towards Biology, Catalysis, and Nanotechnology Chem. Rev. 2004, 104, 293-346
2. Prats-Alfonso, E.; Albericio, F. Functionalization of Gold Surfaces: Recent Developements and Applications J. Mater. Sci. 2011, 46, 7643-7648
3. Coppage, R.; Slocik, J. M.; Briggs, B. D.; Frenkel, A. I.; Heinz, H.; Naik, R. R.; Knecht, M. R. Crystallographic Recognition Controls Peptide Binding for Bio-based Nanomaterials J. Am. Chem. Soc. 2011, 133, 12346-12349
4. Naik, R. R.; Stringer, S. J.; Agarwal, G. A.; Jones, S. E.; Stone, M. O. Biomimetic Synthesis and Patterning of Silver Nanoparticles Nat. Mater. 2002, 1, 169-172
5. Slocik, J. M.; Stone, M. O.; Naik, R. R. Synthesis of Gold Nanoparticles using Multifunctional Peptides Small 2005, 1, 1048-1052
6. Hnilova, M.; Oren, E. E.; Seker, U. O. S.; Wilson, B. R.; Collino, S.; Evans, J. S.; Tamerler, C.; Sarikaya, M. Effect of Molecular Conformations on Adsorption Behavior of Gold-binding Peptides Langmuir 2008, 24, 12440-12445
7. Tamerler, C.; Kacar, T.; Sahin, D.; Fong, H.; Sarikaya, M. Genetically Engineered Polypeptides for Inorganics: A Utility in Biological Materials Science and Engineering Mater. Sci. Eng., C 2007, 27, 558-564
8. Sethi, M.; Knecht, M. R. Experimental Studies on the Interactions Between Au Nanoparticles and Amino Acids: Bio-based Formation of Branched Linear Chains ACS Appl. Mater. Interfaces 2009, 1, 1270-1278
9. Sethi, M.; Knecht, M. R. Understanding the Mechanism of Amino Acid Au Nanoparticle Chain Formation Langmuir 2010, 26, 9860-9874
10. Durand-Gasselin, C.; Sanson, N.; Lequeux, N. Reversible Controlled Assembly of Thermosensitive Polymer-coated Solid Nanoparticles Langmuir 2011, 27, 12329-12335
11. Wilson, K. E.; Fruchtl, H. A.; Grillo, F.; Baddeley, C. J. (S)-Lysine Adsorption Induces the Formation of Gold Nanofingers on Au(111) Chem. Commun. 2011, 47, 10365-10367
12. Mark, A. G.; Forster, M.; Raval, R. Recognition and Ordering at Surfaces: The Importance of Handedness and Footedness ChemPhysChem 2011, 12, 1474-1480
13. Feyer, V.; Plekan, O.; Tsud, N.; Chab, V.; Matolin, V.; Prince, K. C. Adsorption of Histidine and Histidine-containing Peptides on Au(111) Langmuir 2010, 26, 8606-8613
14. Forster, M.; Dyer, M. S.; Persson, M.; Raval, R. 2D Random Organization of Racemic Amino Acid Monolayers Driven by Nanoscale Adsorption Footprints: Proline on Cu(110) Angew. Chem., Int. Ed. 2010, 48, 2344-2349
15. Robin, A.; Marnell, L.; Bjork, J.; Dyer, M. S.; Bermudez, P. S.; Haq, S.; Barrett, S. D.; Persson, M.; Minoia, A.; Lazzaroni, R.; Raval, R. Adsorption and Organisation of the Organic Radical on a Cu(110) Surface: A Combined STM, RAIRS and DFT Study J. Phys. Chem. C 2009, 113, 13223-13230
16. Jones, G.; Jones, L. B.; Thibault-Starzyk, F.; Seddon, E. A.; Raval, R.; Jenkins, S. J.; Held, G. The Local Adsorption Geometry and Electronic Structure of Alanine on Cu(110) Surf. Sci. 2006, 600, 1924-1935
17. Zubavichus, Y.; Zharnikov, M.; Yang, Y.; Fuchs, O.; Hexks, C.; Umbach, E.; Tzvetkov, G.; Netzer, F. P.; Grunze, M. Surface Chemistry of Ultrathin Films of His on Au as Probed by High-resolution Synchrotron Photoemission J. Phys. Chem. B 2005, 109, 884-891
18. Marti, E. M.; Quash, A.; Methivier, C.; Dubot, P.; Pradler, C. M. Interaction of S-Histidine, an amino acid, with Cu and Au Based on RAIRS Colloids Surf., A 2004, 249, 85-89
19. Monti, S.; Li, C.; Carravetta, V. Reactive Dynamics Simulation of Monolayer and Multilayer Adsorption of Glycine on Cu(110) J. Phys. Chem. C 2013, 117, 5221-5228
20. Zhao, X.; Leng, Y.; Cummings, P. T. Self-Assembly of 1,4- Benzenedithiolate/Tetrahydrofuran on a Gold Surface: A Monte Carlo Simulation Study Langmuir 2006, 22, 4116-4124
21. Sändig, N.; Zerbetto, F. Molecules on Gold Chem. Commun. 2010, 46, 667-676
22. Ahn, Y.; Saha, J. K.; Schatz, G. C.; Jang, J. Molecular Dynamics Study of the Formation of a Self-Assembled Monolayer on Gold J. Phys. Chem. C 2011, 115, 10668-10674
23. Kong, C. P.; Peters, E. A.; de With, G.; Zhang, H. X. Molecular Dynamics Simulation of a DOPA/ST Monolayer on the Au(111) Surface Phys. Chem. Chem. Phys. 2013, 15, 15426-15433
24. Jha, K. C.; Liu, H.; Bockstaller, M. R.; Heinz, H. Facet Recognition and Molecular Ordering of Ionic Liquids on Metal Surfaces J. Phys. Chem. C 2013, 117, 25969-25981
25. Almora-Barrios, N.; Novell-Leruth, G.; Whiting, P.; Liz-Marzan, L. M.; Lopez, N. Theoretical Description of the Role of Halides, Silver and Surfactants on the Structure of Gold Nanorods Nano Lett. 2014, 14, 871-875
26. Rosa, M.; Corni, S.; di Felice, R. Enthalpy-Entropy Tuning in the Adsorption of Nucleobases at the Au(111) Surface J. Chem. Theory Comput. 2014, 10, 1707-1716
27. Kruger, D.; Fuchs, H.; Rousseau, R.; Marx, D.; Parrinello, M. Pulling Monatomic Gold Wires with Single Molecules: An ab initio Simulation Phys. Rev. Lett. 2002, 89, 186402
28. Hakkinen, H. The Gold-sulfur Interface at the Nanoscale Nat. Chem. 2012, 4, 443-455
29. Jackson, A. M.; Myerson, J. W.; Stellacci, F. Spontaneous Assembly of Subnanometer Ordered Domains in the Ligand Shell of Monolayer Protected Nanoparticles Nat. Mater. 2004, 3, 330-336
30. Singh, C.; Ghorai, P. K.; Horsch, M. A.; Jackson, A. M.; Larson, R. G.; Stellacci, F.; Glotzer, S. C. Entropy-mediated Patterning of Surfacant-coated Nanoparticles and Surfaces Phys. Rev. Lett. 2007, 99, 226106
31. Causa, F.; della Modlie, R.; Laccino, E.; Mimmi, S.; Marasco, D.; Scognamiglio, P. L.; Battista, E.; Palmieri, C.; Cosenza, C.; Sanguigno, L. Evolutionary Screening and Adsorption Behavior of Engineered M13 Bacteriophage and Derived 12-peptide for the Selective Decoration of Gold Interfaces J. Colloid Interface Sci. 2013, 389, 220-229
32. Brancolini, G.; Kokh, D. B.; Calzolari, L.; Wade, R. C.; Corni, S. Docking of Ubiquitin to Gold Nanoparticles ACS Nano 2012, 6, 9863-9878
33. Iori, F.; Corni, S. Including Image Charge Effects in the Molecular Dynamics Simulations of Molecules on Metal Surfaces J. Comput. Chem. 2008, 29, 1656-1666
34. Iori, F.; di Felice, R.; Molinari, E.; Corni, S. GoIP: An Atomistic Force-field to Describe the Interaction of Proteins with Au(111) Surfaces in Water J. Comput. Chem. 2009, 30, 1465-1476
35. Hoefling, M.; Iori, F.; Corni, S.; Gottschalk, K.-E. Interaction of Amino Acids with the Au(111) Surface: Adsorption Free Energies from Molecular Dynamics Simulations Langmuir 2010, 26, 8347-8351
36. Hoefling, M.; Iori, F.; Corni, S.; Gottschalk, K.-E. The Conformations of Amino Acids on the Gold(111) Surface ChemPhysChem 2010, 11, 1763-1767
37. Hoefling, M.; Monti, S.; Corni, S.; Gottschalk, K. E. Interaction of Beta-sheet Folds with a Gold Surface PLoS One 2011, 6, 20925
38. Heinz, H.; Vaia, R. A.; Farmer, B. L.; Naik, R. R. Accurate Simulation of Surfaces and Interfaces of fcc Metals using 12-6 and 9-6 LJ Potentials J. Phys. Chem. C 2008, 112, 17281-17290
39. Heinz, H.; Farmer, B. L.; Pandey, R. B.; Slocik, J. M.; Patnaik, S. S.; Pachter, R.; Naik, R. R. Nature of Molecular Interactions of Peptides with Gold Palladium and Pd-Au Bimetallic Surfaces in Aqueous Solution J. Am. Chem. Soc. 2009, 131, 9704-9714
40. Feng, J.; Pandey, R. B.; Berry, R. J.; Farmer, B. L.; Naik, R. R.; Heinz, H. Adsorption Mechanism of Single Amino Acid and Surfacant Molecules to Au(111) Surfaces in Aqueous Solution: Design Rules for Metal-binding Molecules Soft Matter 2011, 7, 2113-2120
41. Wright, L. B.; Rodger, P. M.; Corni, S.; Walsh, T. R. GolP-CHARMM: First Principles Based Force-fields for the Interaction of Proteins with Au(111) and Au(100) J. Chem. Theory Comput. 2013, 9, 1616-1630
42. Wright, L. B.; Rodger, P. M.; Walsh, T. R.; Corni, S. First-Principles Based Force-Field for the Interaction of Proteins with Au(100)(5 × 1): An Extension of GolP-CHARMM J. Phys. Chem. C 2013, 117, 24292-24306
43. Hughes, Z. E.; Wright, L. B.; Walsh, T. R. Biomolecular Adsorption at Aqueous Silver Interfaces: First-Principles Calculations, Polarizable Force-Field Simulations, and Comparisons with Gold Langmuir 2013, 29, 13217-13229
44. Tang, Z.; Palafox-Hernandez, J. P.; Law, W.-C.; Hughes, Z. E.; Swihart, M. T.; Prasad, P. N.; Knecht, M. R.; Walsh, T. R. Biomolecular Recognition Principles for Bionanocombinatorics: An Integrated Approach to Elucidate Enthalpic and Entropic Factors ACS Nano 2013, 7, 9632-9646
45. Li, H.-Q.; Chen, A.; Roscoe, S. G.; Lipkowski, J. Electrochemical and FTIR Studies of L-phenylalanine Adsorption at the Au(111) Electrode J. Electroanal. Chem. 2001, 500, 299-310
46. Hess, B.; Kutzner, C.; van der Spoel, D.; Lindahl, E. Gromacs 4: Algorithms for Highly Efficient, Load Balanced, and Scable Molecular Simulation J. Chem. Theory Comput. 2008, 4, 435-447
47. Jorgensen, W. L.; Maxwell, D. S.; Tirado-Rives, J. Development and Testing of the OPLS All-Atom Forcefield on Conformational Energetic and Properties of Organic Liquids J. Am. Chem. Soc. 1996, 118, 11225-11236
48. Frens, G. Controlled Nucleation for the Regulation of the Particle Size in Monodisperse Gold Suspensions Nat. Phys. Sci. 1973, 241, 20-22
49. Magnussen, O. M. Ordered Anion Adlayers on Metal Electrode Surfaces Chem. Rev. 2002, 102, 679-725
50. Sethi, M.; Law, W.-C.; Fennell, W. A.; Prasad, P. N.; Knecht, M. R. Employing Materials Assembly to Elucidate Surface Interactions of Amino Acids with Au Nanoparticles Soft Matter 2011, 7, 6532-6541
51. Hess, B. Determining the Shear Viscosity of Model Liquids from Molecular Dynamics Simulations J. Chem. Phys. 2002, 116, 209-217