메뉴 건너뛰기




Volumn 55, Issue 7, 2014, Pages 1343-1353

MiR396a-mediated basic helix-loop-helix transcription factor bHLH74 repression acts as a regulator for root growth in arabidopsis seedlings

Author keywords

Arabidopsis thaliana; Basic helix loop helix (bHLH) transcription factor 74 (bHLH74); Growth regulating factor (GRF); miRNA396; Root growth

Indexed keywords

ARABIDOPSIS PROTEIN; BASIC HELIX LOOP HELIX TRANSCRIPTION FACTOR; BHLH74 PROTEIN, ARABIDOPSIS; MICRORNA; MIRN396 MICRORNA, ARABIDOPSIS;

EID: 84903978303     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcu058     Document Type: Article
Times cited : (108)

References (37)
  • 1
    • 84877677064 scopus 로고    scopus 로고
    • Classification and comparison of small RNAs from plants
    • Axtell, M.J. (2013) Classification and comparison of small RNAs from plants. Annu. Rev. Plant Biol. 64: 137-159.
    • (2013) Annu. Rev. Plant Biol. , vol.64 , pp. 137-159
    • Axtell, M.J.1
  • 2
    • 84878794992 scopus 로고    scopus 로고
    • MiR396 affects mycorrhization and root meristem activity in the legume Medicago truncatula
    • Bazin, J., Khan, G.A., Combier, J.P., Bustos-Sanmamed, P., Debernardi, J.M., Rodriguez, R. et al. (2013) miR396 affects mycorrhization and root meristem activity in the legume Medicago truncatula. Plant J. 74: 920-934.
    • (2013) Plant J. , vol.74 , pp. 920-934
    • Bazin, J.1    Khan, G.A.2    Combier, J.P.3    Bustos-Sanmamed, P.4    Debernardi, J.M.5    Rodriguez, R.6
  • 3
    • 0032037505 scopus 로고    scopus 로고
    • Analysis of cell division and elongation underlying the developmental acceleration of root growth in Arabidopsis thaliana
    • Beemster, G.T. and Baskin, T.I. (1998) Analysis of cell division and elongation underlying the developmental acceleration of root growth in Arabidopsis thaliana. Plant Physiol. 116: 1515-1526.
    • (1998) Plant Physiol , vol.116 , pp. 1515-1526
    • Beemster, G.T.1    Baskin, T.I.2
  • 4
    • 84855304145 scopus 로고    scopus 로고
    • High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis
    • Breakfield, N.W., Corcoran, D.L., Petricka, J.J., Shen, J., Sae-Seaw, J., Rubio-Somoza, I. et al. (2012) High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis. Genome Res. 22: 163-176.
    • (2012) Genome Res. , vol.22 , pp. 163-176
    • Breakfield, N.W.1    Corcoran, D.L.2    Petricka, J.J.3    Shen, J.4    Sae-Seaw, J.5    Rubio-Somoza, I.6
  • 5
    • 77952679512 scopus 로고    scopus 로고
    • Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate
    • Carlsbecker, A., Lee, J.Y., Roberts, C.J., Dettmer, J., Lehesranta, S., Zhou, J. et al. (2010) Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate. Nature 465: 316-321.
    • (2010) Nature , vol.465 , pp. 316-321
    • Carlsbecker, A.1    Lee, J.Y.2    Roberts, C.J.3    Dettmer, J.4    Lehesranta, S.5    Zhou, J.6
  • 6
    • 81155134163 scopus 로고    scopus 로고
    • Regulation of auxin response by miR393-targeted transport inhibitor response protein 1 is involved in normal development in Arabidopsis
    • Chen, Z.H., Bao, M.L., Sun, Y.Z., Yang, Y.J., Xu, X.H., Wang, J.H. et al. (2011) Regulation of auxin response by miR393-targeted transport inhibitor response protein 1 is involved in normal development in Arabidopsis. Plant Mol. Biol. 77: 619-629.
    • (2011) Plant Mol. Biol. , vol.77 , pp. 619-629
    • Chen, Z.H.1    Bao, M.L.2    Sun, Y.Z.3    Yang, Y.J.4    Xu, X.H.5    Wang, J.H.6
  • 7
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J. and Bent, A.F. (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
    • (1998) Plant J. , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 8
    • 32644481938 scopus 로고    scopus 로고
    • Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis
    • Czechowski, T., Stitt, M., Altmann, T., Udvardi, M.K. and Scheible, W.R. (2005) Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis. Plant Physiol. 139: 5-17.
    • (2005) Plant Physiol , vol.139 , pp. 5-17
    • Czechowski, T.1    Stitt, M.2    Altmann, T.3    Udvardi, M.K.4    Scheible, W.R.5
  • 9
    • 84857497803 scopus 로고    scopus 로고
    • Functional specialization of the plant miR396 regulatory network through distinct microRNA-target interactions
    • Debernardi, J.M., Rodriguez, R.E., Mecchia, M.A. and Palatnik, J.F. (2012) Functional specialization of the plant miR396 regulatory network through distinct microRNA-target interactions. PLoS Genet. 8: e1002419.
    • (2012) PLoS Genet. , vol.8
    • Debernardi, J.M.1    Rodriguez, R.E.2    Mecchia, M.A.3    Palatnik, J.F.4
  • 10
    • 29344462811 scopus 로고    scopus 로고
    • The co-ordination of cell division, differentiation and morphogenesis in the shoot apical meristem: A perspective
    • Fleming, A.J. (2006) The co-ordination of cell division, differentiation and morphogenesis in the shoot apical meristem: a perspective. J. Exp. Bot. 57: 25-32.
    • (2006) J. Exp. Bot. , vol.57 , pp. 25-32
    • Fleming, A.J.1
  • 11
    • 24944510549 scopus 로고    scopus 로고
    • MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development
    • Guo, H.S., Xie, Q., Fei, J.F. and Chua, N.H. (2005) MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development. Plant Cell 17: 1376-1386.
    • (2005) Plant Cell , vol.17 , pp. 1376-1386
    • Guo, H.S.1    Xie, Q.2    Fei, J.F.3    Chua, N.H.4
  • 12
    • 72049120376 scopus 로고    scopus 로고
    • Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance
    • Gutierrez, L., Bussell, J.D., Pacurar, D.I., Schwambach, J., Pacurar, M. and Bellini, C. (2009) Phenotypic plasticity of adventitious rooting in Arabidopsis is controlled by complex regulation of AUXIN RESPONSE FACTOR transcripts and microRNA abundance. Plant Cell 21: 3119-3132.
    • (2009) Plant Cell , vol.21 , pp. 3119-3132
    • Gutierrez, L.1    Bussell, J.D.2    Pacurar, D.I.3    Schwambach, J.4    Pacurar, M.5    Bellini, C.6
  • 13
    • 84860557145 scopus 로고    scopus 로고
    • The arabidopsis microRNA396-GRF1/GRF3 regulatory module acts as a developmental regulator in the reprogramming of root cells during cyst nematode infection
    • Hewezi, T., Maier, T.R., Nettleton, D. and Baum, T.J. (2012) The Arabidopsis microRNA396-GRF1/GRF3 regulatory module acts as a developmental regulator in the reprogramming of root cells during cyst nematode infection. Plant Physiol. 159: 321-335.
    • (2012) Plant Physiol , vol.159 , pp. 321-335
    • Hewezi, T.1    Maier, T.R.2    Nettleton, D.3    Baum, T.J.4
  • 14
    • 22044453506 scopus 로고    scopus 로고
    • The transcription factor AtGRF5 and the transcription coactivator AN3 regulate cell proliferation in leaf primordia of Arabidopsis thaliana
    • Horiguchi, G., Kim, G.T. and Tsukaya, H. (2005) The transcription factor AtGRF5 and the transcription coactivator AN3 regulate cell proliferation in leaf primordia of Arabidopsis thaliana. Plant J. 43: 68-78.
    • (2005) Plant J. , vol.43 , pp. 68-78
    • Horiguchi, G.1    Kim, G.T.2    Tsukaya, H.3
  • 15
    • 84879704714 scopus 로고    scopus 로고
    • Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, AGONAUTE loading, and target cleavage
    • Jeong, D.H., Thatcher, S.R., Brown, R.S., Zhai, J., Park, S., Rymarquis, L.A. et al. (2013) Comprehensive investigation of microRNAs enhanced by analysis of sequence variants, expression patterns, AGONAUTE loading, and target cleavage. Plant Physiol. 162: 1225-1245.
    • (2013) Plant Physiol , vol.162 , pp. 1225-1245
    • Jeong, D.H.1    Thatcher, S.R.2    Brown, R.S.3    Zhai, J.4    Park, S.5    Rymarquis, L.A.6
  • 16
    • 2942672580 scopus 로고    scopus 로고
    • Computational identification of plant microRNAs and their targets, including a stressinduced miRNA
    • Jones-Rhoades, M.W. and Bartel, D.P. (2004) Computational identification of plant microRNAs and their targets, including a stressinduced miRNA. Mol. Cell 14: 787-799.
    • (2004) Mol. Cell , vol.14 , pp. 787-799
    • Jones-Rhoades, M.W.1    Bartel, D.P.2
  • 18
    • 0141872963 scopus 로고    scopus 로고
    • The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis
    • Kim, J.H., Choi, D. and Kende, H. (2003) The AtGRF family of putative transcription factors is involved in leaf and cotyledon growth in Arabidopsis. Plant J. 36: 94-104.
    • (2003) Plant J. , vol.36 , pp. 94-104
    • Kim, J.H.1    Choi, D.2    Kende, H.3
  • 19
    • 33846448706 scopus 로고    scopus 로고
    • GROWTH-REGULATING FACTOR4 of Arabidopsis thaliana is required for development of leaves, cotyledons, and shoot apical meristem
    • Kim, J.H. and Lee, B.H. (2006) GROWTH-REGULATING FACTOR4 of Arabidopsis thaliana is required for development of leaves, cotyledons, and shoot apical meristem. J. Plant Biol. 49: 463-468.
    • (2006) J. Plant Biol. , vol.49 , pp. 463-468
    • Kim, J.H.1    Lee, B.H.2
  • 20
    • 70349644997 scopus 로고    scopus 로고
    • The arabidopsis GRF-INTERACTING FACTOR gene family performs an overlapping function in determining organ size as well as multiple developmental properties
    • Lee, B.H., Ko, J.H., Lee, S., Lee, Y., Pak, J.H. and Kim, J.H. (2009) The Arabidopsis GRF-INTERACTING FACTOR gene family performs an overlapping function in determining organ size as well as multiple developmental properties. Plant Physiol. 151: 655-668.
    • (2009) Plant Physiol , vol.151 , pp. 655-668
    • Lee, B.H.1    Ko, J.H.2    Lee, S.3    Lee, Y.4    Pak, J.H.5    Kim, J.H.6
  • 21
    • 67249094928 scopus 로고    scopus 로고
    • Ectopic expression of miR396 suppresses GRF target gene expression and alters leaf growth in Arabidopsis
    • Liu, D., Song, Y., Chen, Z. and Yu, D. (2009) Ectopic expression of miR396 suppresses GRF target gene expression and alters leaf growth in Arabidopsis. Physiol. Plant. 136: 223-236.
    • (2009) Physiol. Plant. , vol.136 , pp. 223-236
    • Liu, D.1    Song, Y.2    Chen, Z.3    Yu, D.4
  • 22
    • 0030034290 scopus 로고    scopus 로고
    • Cytokinesis in the Arabidopsis embryo involves the syntaxin-related KNOLLE gene product
    • Lukowitz, W., Mayer, U. and Jurgens, G. (1996) Cytokinesis in the Arabidopsis embryo involves the syntaxin-related KNOLLE gene product. Cell 84: 61-71.
    • (1996) Cell , vol.84 , pp. 61-71
    • Lukowitz, W.1    Mayer, U.2    Jurgens, G.3
  • 23
    • 77953193344 scopus 로고    scopus 로고
    • MiR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth
    • Marin, E., Jouannet, V., Herz, A., Lokerse, A.S., Weijers, D., Vaucheret, H. et al. (2010) miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth. Plant Cell 22: 1104-1117.
    • (2010) Plant Cell , vol.22 , pp. 1104-1117
    • Marin, E.1    Jouannet, V.2    Herz, A.3    Lokerse, A.S.4    Weijers, D.5    Vaucheret, H.6
  • 24
    • 77949264252 scopus 로고    scopus 로고
    • MicroRNAmediated signaling involved in plant root development
    • Meng, Y., Ma, X., Chen, D., Wu, P. and Chen, M. (2010) MicroRNAmediated signaling involved in plant root development. Biochem. Biophys. Res. Commun. 393: 345-349.
    • (2010) Biochem. Biophys. Res. Commun. , vol.393 , pp. 345-349
    • Meng, Y.1    Ma, X.2    Chen, D.3    Wu, P.4    Chen, M.5
  • 25
    • 14644422704 scopus 로고    scopus 로고
    • Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control
    • Menges, M., de Jager, S.M., Gruissem, W. and Murray, J.A. (2005) Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. Plant J. 41: 546-566.
    • (2005) Plant J. , vol.41 , pp. 546-566
    • Menges, M.1    De Jager, S.M.2    Gruissem, W.3    Murray, J.A.4
  • 28
    • 70349556320 scopus 로고    scopus 로고
    • Regulation and functional specialization of small RNA-target nodes during plant development
    • Rubio-Somoza, I., Cuperus, J.T., Weigel, D. and Carrington, J.C. (2009) Regulation and functional specialization of small RNA-target nodes during plant development. Curr. Opin. Plant Biol. 12: 622-627.
    • (2009) Curr. Opin. Plant Biol. , vol.12 , pp. 622-627
    • Rubio-Somoza, I.1    Cuperus, J.T.2    Weigel, D.3    Carrington, J.C.4
  • 29
    • 30344456035 scopus 로고    scopus 로고
    • Facile means for quantifying microRNA expression by real-time PCR
    • Shi, R. and Chiang, V.L. (2005) Facile means for quantifying microRNA expression by real-time PCR. Biotechniques 39: 519-525.
    • (2005) Biotechniques , vol.39 , pp. 519-525
    • Shi, R.1    Chiang, V.L.2
  • 30
    • 84870038772 scopus 로고    scopus 로고
    • Construction of short tandem target mimic (STTM) to block the functions of plant and animal microRNAs
    • Tang, G., Yan, J., Gu, Y., Qiao, M., Fan, R., Mao, Y. et al. (2012) Construction of short tandem target mimic (STTM) to block the functions of plant and animal microRNAs. Methods 58: 118-125.
    • (2012) Methods , vol.58 , pp. 118-125
    • Tang, G.1    Yan, J.2    Gu, Y.3    Qiao, M.4    Fan, R.5    Mao, Y.6
  • 32
    • 77749264610 scopus 로고    scopus 로고
    • Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana
    • Vidal, E.A., Araus, V., Lu, C., Parry, G., Green, P.J., Coruzzi, G.M. et al. (2010) Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana. Proc. Natl Acad. Sci. USA 107: 4477-4482.
    • (2010) Proc. Natl Acad. Sci. USA , vol.107 , pp. 4477-4482
    • Vidal, E.A.1    Araus, V.2    Lu, C.3    Parry, G.4    Green, P.J.5    Coruzzi, G.M.6
  • 33
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • Voinnet, O. (2009) Origin, biogenesis, and activity of plant microRNAs. Cell 136: 669-687.
    • (2009) Cell , vol.136 , pp. 669-687
    • Voinnet, O.1
  • 34
    • 27744596243 scopus 로고    scopus 로고
    • Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis
    • Wang, J.W., Wang, L.J., Mao, Y.B., Cai, W.J., Xue, H.W. and Chen, X.Y. (2005) Control of root cap formation by MicroRNA-targeted auxin response factors in Arabidopsis. Plant Cell 17: 2204-2216.
    • (2005) Plant Cell , vol.17 , pp. 2204-2216
    • Wang, J.W.1    Wang, L.J.2    Mao, Y.B.3    Cai, W.J.4    Xue, H.W.5    Chen, X.Y.6
  • 35
    • 78650665524 scopus 로고    scopus 로고
    • MiR396-targeted AtGRF transcription factors are required for coordination of cell division and differentiation during leaf development in Arabidopsis
    • Wang, L., Gu, X., Xu, D., Wang, W., Wang, H., Zeng, M. et al. (2011) miR396-targeted AtGRF transcription factors are required for coordination of cell division and differentiation during leaf development in Arabidopsis. J. Exp. Bot. 62: 761-773.
    • (2011) J. Exp. Bot. , vol.62 , pp. 761-773
    • Wang, L.1    Gu, X.2    Xu, D.3    Wang, W.4    Wang, H.5    Zeng, M.6
  • 36
    • 84859067739 scopus 로고    scopus 로고
    • Effective small RNA destruction by the expression of a short tandem target mimic in Arabidopsis
    • Yan, J., Gu, Y., Jia, X., Kang, W., Pan, S., Tang, X. et al. (2012) Effective small RNA destruction by the expression of a short tandem target mimic in Arabidopsis. Plant Cell 24: 415-427.
    • (2012) Plant Cell , vol.24 , pp. 415-427
    • Yan, J.1    Gu, Y.2    Jia, X.3    Kang, W.4    Pan, S.5    Tang, X.6
  • 37
    • 77950365831 scopus 로고    scopus 로고
    • Auxin regulation of the microRNA390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development
    • Yoon, E.K., Yang, J.H., Lim, J., Kim, S.H., Kim, S.K. and Lee, W.S. (2010) Auxin regulation of the microRNA390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development. Nucleic Acids Res. 38: 1382-1391.
    • (2010) Nucleic Acids Res. , vol.38 , pp. 1382-1391
    • Yoon, E.K.1    Yang, J.H.2    Lim, J.3    Kim, S.H.4    Kim, S.K.5    Lee, W.S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.